RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 PCBP1Q15365 356 aaKnown RBP eCLIP13.41□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 FAM187BQ17R55 369 aa13.41□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 GBP6Q6ZN66 633 aa13.41□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 KSR1Q8IVT5 923 aa13.41□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 PRIMPOLQ96LW4 560 aa13.41□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 ZIC5Q96T25 663 aa13.41□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 AP5M1Q9H0R1 490 aa13.41□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 UPF3AQ9H1J1 476 aaKnown RBP13.41□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 RNPEPQ9H4A4 650 aa13.41□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 ZNHIT6Q9NWK9 470 aaKnown RBP13.41□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 SAGE1Q9NXZ1 904 aa13.41□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 PLAGL2Q9UPG8 496 aa13.41□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 TRIP12Q14669 1992 aaPredicted RBP13.41□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 HAS3O00219 553 aa13.4□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 ZSCAN12O43309 604 aa13.4□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 RPLP2P05387 115 aaKnown RBP13.4□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 CTGFP29279 349 aa13.4□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 ADSSP30520 456 aa13.4□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 FMO5P49326 533 aa13.4□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 LIG4P49917 911 aa13.4□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 CYP2J2P51589 502 aa13.4□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 ADKP55263 362 aaKnown RBP13.4□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 PRMT2P55345 433 aa13.4□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 KCNMA1Q12791 1236 aa13.4□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 MKRN4PQ13434 485 aaPredicted RBP13.4□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 ARHGEF6Q15052 776 aa13.4□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 MAPK6Q16659 721 aa13.4□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 EXOC3L4Q17RC7 722 aa13.4□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 TMEM63BQ5T3F8 832 aa13.4□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 GJC2Q5T442 439 aaPredicted RBP13.4□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 TRMT1LQ7Z2T5 733 aaKnown RBP13.4□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 ZNF410Q86VK4 478 aa13.4□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 CCDC170Q8IYT3 715 aa13.4□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 GPD1LQ8N335 351 aa13.4□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 PRPF31Q8WWY3 499 aaKnown RBP13.4□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 MFSD14AQ96MC6 490 aa13.4□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 CBWD1Q9BRT8 395 aa13.4□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 MRPL4Q9BYD3 311 aaKnown RBP13.4□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 SUCLA2Q9P2R7 463 aaPredicted RBP13.4□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 PDCD11Q14690 1871 aaKnown RBP13.4□□□□□ -0.26
NEDD8-MDP1-203ENST00000604306 MBLAC1A4D2B0 266 aaPredicted RBP13.39□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 ADCY6O43306 1168 aa13.39□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 EXTL3O43909 919 aa13.39□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 MSCO60682 206 aa13.39□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 TOM1L1O75674 476 aa13.39□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 ANXA13P27216 316 aa13.39□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 HOXC8P31273 242 aa13.39□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 CYP2C19P33261 490 aa13.39□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 PHKA2P46019 1235 aa13.39□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 VAMP7P51809 220 aa13.39□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 SOX10P56693 466 aa13.39□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 GJA9P57773 515 aa13.39□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 PTENP60484 403 aa13.39□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 CLDN10P78369 228 aa13.39□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 PPFIA1Q13136 1202 aa13.39□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 GRM1Q13255 1194 aa13.39□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 GRIK4Q16099 956 aa13.39□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 SNRNP35Q16560 246 aaKnown RBP13.39□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 CCL14Q16627 93 aa13.39□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 DCAF17Q5H9S7 520 aaPredicted RBP13.39□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 EFCAB12Q6NXP0 572 aa13.39□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 SLC39A4Q6P5W5 647 aa13.39□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 MTHFD1LQ6UB35 978 aa13.39□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 CCAR2Q8N163 923 aaKnown RBP13.39□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 ZNF784Q8NCA9 323 aaPredicted RBP13.39□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 POMGNT1Q8WZA1 660 aa13.39□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 BICD1Q96G01 975 aa13.39□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 PCMTD1Q96MG8 357 aaPredicted RBP13.39□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 KIFC3Q9BVG8 833 aa13.39□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 FZD8Q9H461 694 aa13.39□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 MMRN2Q9H8L6 949 aa13.39□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 RRAGDQ9NQL2 400 aaPredicted RBP13.39□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 PRMT7Q9NVM4 692 aaPredicted RBP13.39□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 A0A0B4J269 797 aa13.38□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 ANKRD63C9JTQ0 380 aa13.38□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 SEPT4O43236 478 aa13.38□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 DYNC1LI2O43237 492 aaPredicted RBP13.38□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 ZNF286BP0CG31 522 aa13.38□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 KLRC1P26715 233 aa13.38□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 FLT3LGP49771 235 aa13.38□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 KYAT1Q16773 422 aa13.38□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 TCERG1LQ5VWI1 586 aa13.38□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 RNF149Q8NC42 400 aa13.38□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 PXYLP1Q8TE99 480 aa13.38□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 TRIB2Q92519 343 aa13.38□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 BAP1Q92560 729 aa13.38□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 FAM81BQ96LP2 452 aa13.38□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 MAP7D2Q96T17 732 aa13.38□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 GANQ9H2C0 597 aa13.38□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 COQ4Q9Y3A0 265 aa13.38□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 ATP8B3O60423 1300 aa13.38□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 SMIM35A0A1B0GVV1 85 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 SSU72P8A0A1W2PR75 194 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 ZNF233A6NK53 670 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 ACKR2O00590 384 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 ZEB2O60315 1214 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 AOC2O75106 756 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 NOL4O94818 638 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 PRKCBP05771 671 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 GNAT1P11488 350 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms