RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 TRAK2O60296 914 aa15.29■□□□□ 0.04
RNF40-212ENST00000602784 ZNF623O75123 536 aa15.29■□□□□ 0.04
RNF40-212ENST00000602784 ZNF202O95125 648 aa15.29■□□□□ 0.04
RNF40-212ENST00000602784 EOMESO95936 686 aa15.29■□□□□ 0.04
RNF40-212ENST00000602784 PRKCBP05771 671 aa15.29■□□□□ 0.04
RNF40-212ENST00000602784 MYL1P05976 194 aa15.29■□□□□ 0.04
RNF40-212ENST00000602784 STAG3L1P0CL83 205 aa15.29■□□□□ 0.04
RNF40-212ENST00000602784 NCKAP1LP55160 1127 aa15.29■□□□□ 0.04
RNF40-212ENST00000602784 RAB30Q15771 203 aa15.29■□□□□ 0.04
RNF40-212ENST00000602784 FAM109BQ6ICB4 259 aaPredicted RBP15.29■□□□□ 0.04
RNF40-212ENST00000602784 NOTUMQ6P988 496 aa15.29■□□□□ 0.04
RNF40-212ENST00000602784 FMR1NBQ8N0W7 255 aaPredicted RBP15.29■□□□□ 0.04
RNF40-212ENST00000602784 RAD9AQ99638 391 aa15.29■□□□□ 0.04
RNF40-212ENST00000602784 KIFC3Q9BVG8 833 aa15.29■□□□□ 0.04
RNF40-212ENST00000602784 ST6GALNAC4Q9H4F1 302 aa15.29■□□□□ 0.04
RNF40-212ENST00000602784 SERTAD1Q9UHV2 236 aa15.29■□□□□ 0.04
RNF40-212ENST00000602784 PCDHA11Q9Y5I1 949 aa15.29■□□□□ 0.04
RNF40-212ENST00000602784 GRXCR1A8MXD5 290 aa15.28■□□□□ 0.04
RNF40-212ENST00000602784 RBAK-RBAKDNI3L0D1 243 aa15.28■□□□□ 0.04
RNF40-212ENST00000602784 ARF4P18085 180 aaPredicted RBP15.28■□□□□ 0.04
RNF40-212ENST00000602784 RAB27AP51159 221 aa15.28■□□□□ 0.04
RNF40-212ENST00000602784 HTRA4P83105 476 aaPredicted RBP15.28■□□□□ 0.04
RNF40-212ENST00000602784 FAM160A1Q05DH4 1040 aa15.28■□□□□ 0.04
RNF40-212ENST00000602784 PRPF4BQ13523 1007 aaKnown RBP15.28■□□□□ 0.04
RNF40-212ENST00000602784 TWF2Q6IBS0 349 aaKnown RBP15.28■□□□□ 0.04
RNF40-212ENST00000602784 GPR153Q6NV75 609 aa15.28■□□□□ 0.04
RNF40-212ENST00000602784 KANK3Q6NY19 840 aa15.28■□□□□ 0.04
RNF40-212ENST00000602784 HAUS6Q7Z4H7 955 aa15.28■□□□□ 0.04
RNF40-212ENST00000602784 ECHDC2Q86YB7 292 aa15.28■□□□□ 0.04
RNF40-212ENST00000602784 FAM178BQ8IXR5 827 aa15.28■□□□□ 0.04
RNF40-212ENST00000602784 CCDC65Q8IXS2 484 aa15.28■□□□□ 0.04
RNF40-212ENST00000602784 ENGASEQ8NFI3 743 aa15.28■□□□□ 0.04
RNF40-212ENST00000602784 STAMQ92783 540 aa15.28■□□□□ 0.04
RNF40-212ENST00000602784 PAGE5Q96GU1 130 aa15.28■□□□□ 0.04
RNF40-212ENST00000602784 CCDC34Q96HJ3 373 aa15.28■□□□□ 0.04
RNF40-212ENST00000602784 FIZ1Q96SL8 496 aa15.28■□□□□ 0.04
RNF40-212ENST00000602784 ZBED2Q9BTP6 218 aa15.28■□□□□ 0.04
RNF40-212ENST00000602784 ZHX3Q9H4I2 956 aa15.28■□□□□ 0.04
RNF40-212ENST00000602784 OLFML3Q9NRN5 406 aa15.28■□□□□ 0.04
RNF40-212ENST00000602784 PANK4Q9NVE7 773 aa15.28■□□□□ 0.04
RNF40-212ENST00000602784 TMEM161AQ9NX61 479 aa15.28■□□□□ 0.04
RNF40-212ENST00000602784 INSL6Q9Y581 213 aa15.28■□□□□ 0.04
RNF40-212ENST00000602784 PCDHB7Q9Y5E2 793 aa15.28■□□□□ 0.04
RNF40-212ENST00000602784 LAMA2P24043 3122 aaKnown RBP15.28■□□□□ 0.04
RNF40-212ENST00000602784 PVALEFA0A1B0GWK0 134 aa15.27■□□□□ 0.04
RNF40-212ENST00000602784 B4GALT5O43286 388 aa15.27■□□□□ 0.04
RNF40-212ENST00000602784 IDEP14735 1019 aa15.27■□□□□ 0.04
RNF40-212ENST00000602784 STRN3Q13033 797 aa15.27■□□□□ 0.04
RNF40-212ENST00000602784 SNW1Q13573 536 aaKnown RBP15.27■□□□□ 0.04
RNF40-212ENST00000602784 KRBA2Q6ZNG9 492 aa15.27■□□□□ 0.04
RNF40-212ENST00000602784 TAS1R3Q7RTX0 852 aa15.27■□□□□ 0.04
RNF40-212ENST00000602784 ZNF720Q7Z2F6 126 aa15.27■□□□□ 0.04
RNF40-212ENST00000602784 CNNM3Q8NE01 707 aa15.27■□□□□ 0.04
RNF40-212ENST00000602784 RSPH1Q8WYR4 309 aa15.27■□□□□ 0.04
RNF40-212ENST00000602784 FAM105AQ9NUU6 356 aa15.27■□□□□ 0.04
RNF40-212ENST00000602784 MSRAQ9UJ68 235 aa15.27■□□□□ 0.04
RNF40-212ENST00000602784 LRFN2Q9ULH4 789 aa15.27■□□□□ 0.04
RNF40-212ENST00000602784 LAMA3Q16787 3333 aa15.27■□□□□ 0.03
RNF40-212ENST00000602784 PTPRSQ13332 1948 aa15.27■□□□□ 0.03
RNF40-212ENST00000602784 N4BP3O15049 544 aa15.26■□□□□ 0.03
RNF40-212ENST00000602784 HOXA2O43364 376 aa15.26■□□□□ 0.03
RNF40-212ENST00000602784 TLL1O43897 1013 aa15.26■□□□□ 0.03
RNF40-212ENST00000602784 DGKIO75912 1065 aa15.26■□□□□ 0.03
RNF40-212ENST00000602784 UPP2O95045 317 aa15.26■□□□□ 0.03
RNF40-212ENST00000602784 AFMP43652 599 aa15.26■□□□□ 0.03
RNF40-212ENST00000602784 UBE2HP62256 183 aa15.26■□□□□ 0.03
RNF40-212ENST00000602784 ASIC1P78348 528 aa15.26■□□□□ 0.03
RNF40-212ENST00000602784 GTF2BQ00403 316 aa15.26■□□□□ 0.03
RNF40-212ENST00000602784 ALCAMQ13740 583 aa15.26■□□□□ 0.03
RNF40-212ENST00000602784 HERC4Q5GLZ8 1057 aaPredicted RBP15.26■□□□□ 0.03
RNF40-212ENST00000602784 UBXN11Q5T124 520 aa15.26■□□□□ 0.03
RNF40-212ENST00000602784 NT5DC1Q5TFE4 455 aa15.26■□□□□ 0.03
RNF40-212ENST00000602784 SLC27A1Q6PCB7 646 aa15.26■□□□□ 0.03
RNF40-212ENST00000602784 UNC13DQ70J99 1090 aa15.26■□□□□ 0.03
RNF40-212ENST00000602784 MRPL10Q7Z7H8 261 aaKnown RBP15.26■□□□□ 0.03
RNF40-212ENST00000602784 ZNF598Q86UK7 904 aaKnown RBP15.26■□□□□ 0.03
RNF40-212ENST00000602784 SFR1Q86XK3 245 aa15.26■□□□□ 0.03
RNF40-212ENST00000602784 HVCN1Q96D96 273 aa15.26■□□□□ 0.03
RNF40-212ENST00000602784 CPB2Q96IY4 423 aa15.26■□□□□ 0.03
RNF40-212ENST00000602784 TIGD1Q96MW7 591 aa15.26■□□□□ 0.03
RNF40-212ENST00000602784 STRA6Q9BX79 667 aa15.26■□□□□ 0.03
RNF40-212ENST00000602784 MRPL4Q9BYD3 311 aaKnown RBP15.26■□□□□ 0.03
RNF40-212ENST00000602784 PBX4Q9BYU1 374 aa15.26■□□□□ 0.03
RNF40-212ENST00000602784 TBX20Q9UMR3 447 aa15.26■□□□□ 0.03
RNF40-212ENST00000602784 TNFSF13BQ9Y275 285 aa15.26■□□□□ 0.03
RNF40-212ENST00000602784 PCDHB2Q9Y5E7 798 aa15.26■□□□□ 0.03
RNF40-212ENST00000602784 TTLL13PA6NNM8 815 aa15.25■□□□□ 0.03
RNF40-212ENST00000602784 K7ENM7 598 aa15.25■□□□□ 0.03
RNF40-212ENST00000602784 GTPBP6O43824 516 aaPredicted RBP15.25■□□□□ 0.03
RNF40-212ENST00000602784 GADD45BO75293 160 aaPredicted RBP15.25■□□□□ 0.03
RNF40-212ENST00000602784 PPP1R37O75864 691 aa15.25■□□□□ 0.03
RNF40-212ENST00000602784 DNAJB2P25686 324 aa15.25■□□□□ 0.03
RNF40-212ENST00000602784 RABGGTBP53611 331 aa15.25■□□□□ 0.03
RNF40-212ENST00000602784 COASYQ13057 564 aa15.25■□□□□ 0.03
RNF40-212ENST00000602784 CUL4BQ13620 913 aa15.25■□□□□ 0.03
RNF40-212ENST00000602784 TPRNQ4KMQ1 711 aa15.25■□□□□ 0.03
RNF40-212ENST00000602784 ATF7IP2Q5U623 682 aa15.25■□□□□ 0.03
RNF40-212ENST00000602784 FAM117BQ6P1L5 589 aa15.25■□□□□ 0.03
RNF40-212ENST00000602784 ZPBP2Q6X784 338 aa15.25■□□□□ 0.03
RNF40-212ENST00000602784 APBB1IPQ7Z5R6 666 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms