RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 LARP4BQ92615 738 aaKnown RBP14.14□□□□□ -0.15
USE1-209ENST00000601592 RAD54LQ92698 747 aa14.14□□□□□ -0.15
USE1-209ENST00000601592 TIPINQ9BVW5 301 aa14.14□□□□□ -0.15
USE1-209ENST00000601592 PANK2Q9BZ23 570 aa14.14□□□□□ -0.15
USE1-209ENST00000601592 TMEM117Q9H0C3 514 aa14.14□□□□□ -0.15
USE1-209ENST00000601592 ZHX3Q9H4I2 956 aa14.14□□□□□ -0.15
USE1-209ENST00000601592 BLOC1S4Q9NUP1 217 aa14.14□□□□□ -0.15
USE1-209ENST00000601592 PRMT7Q9NVM4 692 aaPredicted RBP14.14□□□□□ -0.15
USE1-209ENST00000601592 HCSTQ9UBK5 93 aa14.14□□□□□ -0.15
USE1-209ENST00000601592 CFAP45Q9UL16 551 aa14.14□□□□□ -0.15
USE1-209ENST00000601592 INPP5FQ9Y2H2 1132 aa14.14□□□□□ -0.15
USE1-209ENST00000601592 PCDHB2Q9Y5E7 798 aa14.14□□□□□ -0.15
USE1-209ENST00000601592 PPP6R2O75170 966 aa14.13□□□□□ -0.15
USE1-209ENST00000601592 ARF4P18085 180 aaPredicted RBP14.13□□□□□ -0.15
USE1-209ENST00000601592 HOXA11P31270 313 aaPredicted RBP14.13□□□□□ -0.15
USE1-209ENST00000601592 STAT6P42226 847 aa14.13□□□□□ -0.15
USE1-209ENST00000601592 NPTX2P47972 431 aa14.13□□□□□ -0.15
USE1-209ENST00000601592 GPM6BQ13491 265 aa14.13□□□□□ -0.15
USE1-209ENST00000601592 PRPF4BQ13523 1007 aaKnown RBP14.13□□□□□ -0.15
USE1-209ENST00000601592 CCDC85BQ15834 202 aaPredicted RBP14.13□□□□□ -0.15
USE1-209ENST00000601592 AMHR2Q16671 573 aa14.13□□□□□ -0.15
USE1-209ENST00000601592 CLLU1OSQ5K130 101 aa14.13□□□□□ -0.15
USE1-209ENST00000601592 CCDC73Q6ZRK6 1079 aa14.13□□□□□ -0.15
USE1-209ENST00000601592 ZNF598Q86UK7 904 aaKnown RBP14.13□□□□□ -0.15
USE1-209ENST00000601592 DAW1Q8N136 415 aa14.13□□□□□ -0.15
USE1-209ENST00000601592 PDILTQ8N807 584 aa14.13□□□□□ -0.15
USE1-209ENST00000601592 KCNG4Q8TDN1 519 aa14.13□□□□□ -0.15
USE1-209ENST00000601592 PGBD4Q96DM1 585 aa14.13□□□□□ -0.15
USE1-209ENST00000601592 CCDC51Q96ER9 411 aa14.13□□□□□ -0.15
USE1-209ENST00000601592 APOL6Q9BWW8 343 aa14.13□□□□□ -0.15
USE1-209ENST00000601592 EIF2AQ9BY44 585 aaKnown RBP14.13□□□□□ -0.15
USE1-209ENST00000601592 KMT5AQ9NQR1 393 aa14.13□□□□□ -0.15
USE1-209ENST00000601592 RNF19AQ9NV58 838 aa14.13□□□□□ -0.15
USE1-209ENST00000601592 KCND2Q9NZV8 630 aa14.13□□□□□ -0.15
USE1-209ENST00000601592 STK17AQ9UEE5 414 aa14.13□□□□□ -0.15
USE1-209ENST00000601592 RWDD3Q9Y3V2 267 aa14.13□□□□□ -0.15
USE1-209ENST00000601592 MORC2Q9Y6X9 1032 aaPredicted RBP14.13□□□□□ -0.15
USE1-209ENST00000601592 TRANK1O15050 2925 aa14.13□□□□□ -0.15
USE1-209ENST00000601592 TRIP11Q15643 1979 aa14.13□□□□□ -0.15
USE1-209ENST00000601592 MEIS3P2A8K0S8 358 aa14.12□□□□□ -0.15
USE1-209ENST00000601592 K7ERI5 159 aa14.12□□□□□ -0.15
USE1-209ENST00000601592 CUTAO60888 179 aa14.12□□□□□ -0.15
USE1-209ENST00000601592 TBCAO75347 108 aaKnown RBP14.12□□□□□ -0.15
USE1-209ENST00000601592 FAM13AO94988 1023 aa14.12□□□□□ -0.15
USE1-209ENST00000601592 NPTXRO95502 500 aa14.12□□□□□ -0.15
USE1-209ENST00000601592 BMPR1AP36894 532 aa14.12□□□□□ -0.15
USE1-209ENST00000601592 EFNA5P52803 228 aa14.12□□□□□ -0.15
USE1-209ENST00000601592 MAPK7Q13164 816 aa14.12□□□□□ -0.15
USE1-209ENST00000601592 UBXN11Q5T124 520 aa14.12□□□□□ -0.15
USE1-209ENST00000601592 ATL3Q6DD88 541 aa14.12□□□□□ -0.15
USE1-209ENST00000601592 GLB1LQ6UWU2 654 aa14.12□□□□□ -0.15
USE1-209ENST00000601592 LRRC43Q8N309 656 aa14.12□□□□□ -0.15
USE1-209ENST00000601592 CLP1Q92989 425 aaKnown RBP14.12□□□□□ -0.15
USE1-209ENST00000601592 PRIMPOLQ96LW4 560 aa14.12□□□□□ -0.15
USE1-209ENST00000601592 CASD1Q96PB1 797 aa14.12□□□□□ -0.15
USE1-209ENST00000601592 REEP2Q9BRK0 252 aa14.12□□□□□ -0.15
USE1-209ENST00000601592 C11orf84Q9BUA3 381 aaPredicted RBP14.12□□□□□ -0.15
USE1-209ENST00000601592 TRAIPQ9BWF2 469 aa14.12□□□□□ -0.15
USE1-209ENST00000601592 USP20Q9Y2K6 914 aa14.12□□□□□ -0.15
USE1-209ENST00000601592 ZDHHC9Q9Y397 364 aa14.12□□□□□ -0.15
USE1-209ENST00000601592 PHLPP2Q6ZVD8 1323 aa14.12□□□□□ -0.15
USE1-209ENST00000601592 CNTNAP2Q9UHC6 1331 aa14.12□□□□□ -0.15
USE1-209ENST00000601592 CITO14578 2027 aa14.11□□□□□ -0.15
USE1-209ENST00000601592 N4BP3O15049 544 aa14.11□□□□□ -0.15
USE1-209ENST00000601592 SLC16A4O15374 487 aa14.11□□□□□ -0.15
USE1-209ENST00000601592 ITGA4P13612 1032 aa14.11□□□□□ -0.15
USE1-209ENST00000601592 PLS3P13797 630 aa14.11□□□□□ -0.15
USE1-209ENST00000601592 KRT85P78386 507 aa14.11□□□□□ -0.15
USE1-209ENST00000601592 RNASELQ05823 741 aaKnown RBP14.11□□□□□ -0.15
USE1-209ENST00000601592 FAM187BQ17R55 369 aa14.11□□□□□ -0.15
USE1-209ENST00000601592 TPRNQ4KMQ1 711 aa14.11□□□□□ -0.15
USE1-209ENST00000601592 ARSHQ5FYA8 562 aa14.11□□□□□ -0.15
USE1-209ENST00000601592 SLC27A1Q6PCB7 646 aa14.11□□□□□ -0.15
USE1-209ENST00000601592 PPP4R3CPQ6ZMV5 832 aa14.11□□□□□ -0.15
USE1-209ENST00000601592 HACE1Q8IYU2 909 aa14.11□□□□□ -0.15
USE1-209ENST00000601592 URGCPQ8TCY9 931 aa14.11□□□□□ -0.15
USE1-209ENST00000601592 CHAMP1Q96JM3 812 aa14.11□□□□□ -0.15
USE1-209ENST00000601592 ADPGKQ9BRR6 497 aa14.11□□□□□ -0.15
USE1-209ENST00000601592 CCDC113Q9H0I3 377 aa14.11□□□□□ -0.15
USE1-209ENST00000601592 FZD8Q9H461 694 aa14.11□□□□□ -0.15
USE1-209ENST00000601592 NXF3Q9H4D5 531 aaKnown RBP14.11□□□□□ -0.15
USE1-209ENST00000601592 RSAD1Q9HA92 442 aa14.11□□□□□ -0.15
USE1-209ENST00000601592 C17orf75Q9HAS0 396 aa14.11□□□□□ -0.15
USE1-209ENST00000601592 AAASQ9NRG9 546 aa14.11□□□□□ -0.15
USE1-209ENST00000601592 TYW1Q9NV66 732 aaKnown RBP14.11□□□□□ -0.15
USE1-209ENST00000601592 HES2Q9Y543 173 aa14.11□□□□□ -0.15
USE1-209ENST00000601592 IPPQ9Y573 584 aa14.11□□□□□ -0.15
USE1-209ENST00000601592 PCDHB12Q9Y5F1 795 aa14.11□□□□□ -0.15
USE1-209ENST00000601592 ATP6V1DQ9Y5K8 247 aa14.11□□□□□ -0.15
USE1-209ENST00000601592 MYO7AQ13402 2215 aa14.11□□□□□ -0.15
USE1-209ENST00000601592 COL6A3P12111 3177 aa14.1□□□□□ -0.15
USE1-209ENST00000601592 A0A087X0B3 334 aa14.1□□□□□ -0.15
USE1-209ENST00000601592 TTLL13PA6NNM8 815 aa14.1□□□□□ -0.15
USE1-209ENST00000601592 H3BNC9 293 aa14.1□□□□□ -0.15
USE1-209ENST00000601592 ACKR2O00590 384 aa14.1□□□□□ -0.15
USE1-209ENST00000601592 LPXNO60711 386 aa14.1□□□□□ -0.15
USE1-209ENST00000601592 ZNF623O75123 536 aa14.1□□□□□ -0.15
USE1-209ENST00000601592 EDN1P05305 212 aa14.1□□□□□ -0.15
USE1-209ENST00000601592 RB1P06400 928 aa14.1□□□□□ -0.15
USE1-209ENST00000601592 LINC00271P0C7V0 271 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms