RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 ACADVLP49748 655 aa12.95□□□□□ -0.34
SHANK2-218ENST00000601538 CYGBQ8WWM9 190 aa12.95□□□□□ -0.34
SHANK2-218ENST00000601538 MXD3Q9BW11 206 aa12.95□□□□□ -0.34
SHANK2-218ENST00000601538 ADAM30Q9UKF2 790 aa12.95□□□□□ -0.34
SHANK2-218ENST00000601538 CFBP00751 764 aa12.95□□□□□ -0.34
SHANK2-218ENST00000601538 SPDYCQ5MJ68 293 aa12.95□□□□□ -0.34
SHANK2-218ENST00000601538 CDH24Q86UP0 819 aa12.95□□□□□ -0.34
SHANK2-218ENST00000601538 A0A1W2PQC6 194 aa12.95□□□□□ -0.34
SHANK2-218ENST00000601538 ZBTB22O15209 634 aa12.95□□□□□ -0.34
SHANK2-218ENST00000601538 GSPT1P15170 499 aaKnown RBP12.95□□□□□ -0.34
SHANK2-218ENST00000601538 FAM47EQ6ZV65 393 aa12.95□□□□□ -0.34
SHANK2-218ENST00000601538 KRT27Q7Z3Y8 459 aa12.95□□□□□ -0.34
SHANK2-218ENST00000601538 GINM1Q9NU53 330 aa12.95□□□□□ -0.34
SHANK2-218ENST00000601538 MAP3K15Q6ZN16 1313 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 SMIM31A0A1B0GVY4 71 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 A8MXQ7 604 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 EPHB1P54762 984 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 XKR9Q5GH70 373 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 PLBD2Q8NHP8 589 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 ATXN10Q9UBB4 475 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 PCDHGB4Q9UN71 923 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 SUGT1Q9Y2Z0 365 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 SNTNA6NMZ2 147 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 LSM1O15116 133 aaKnown RBP12.94□□□□□ -0.34
SHANK2-218ENST00000601538 CCDC166P0CW27 439 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 HPS5Q9UPZ3 1129 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 ITM2BQ9Y287 266 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 ARHGEF40Q8TER5 1519 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 Q4G0T1 1027 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 FAM133AQ8N9E0 248 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 SPATA5Q8NB90 893 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 RNF26Q9BY78 433 aaPredicted RBP12.94□□□□□ -0.34
SHANK2-218ENST00000601538 RSL24D1Q9UHA3 163 aaKnown RBP12.94□□□□□ -0.34
SHANK2-218ENST00000601538 SAP30BPQ9UHR5 308 aaKnown RBP12.94□□□□□ -0.34
SHANK2-218ENST00000601538 DNAJC12Q9UKB3 198 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 TNNQ9UQP3 1299 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 USP19O94966 1318 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 ADCY10Q96PN6 1610 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 STX7O15400 261 aaKnown RBP12.94□□□□□ -0.34
SHANK2-218ENST00000601538 HIBADHP31937 336 aaKnown RBP12.94□□□□□ -0.34
SHANK2-218ENST00000601538 FBXW4P57775 412 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 NAALADL2Q58DX5 795 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 ARMCX2Q7L311 632 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 OMA1Q96E52 524 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 GORASP1Q9BQQ3 440 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.94□□□□□ -0.341e-7■■□□□ 11.4
SHANK2-218ENST00000601538 CLEC4MQ9H2X3 399 aaPredicted RBP12.94□□□□□ -0.34
SHANK2-218ENST00000601538 DCTN4Q9UJW0 460 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 PFASO15067 1338 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 TRIM13O60858 407 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 SEC16BQ96JE7 1060 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 MMADHCQ9H3L0 296 aaPredicted RBP12.94□□□□□ -0.34
SHANK2-218ENST00000601538 ABHD10Q9NUJ1 306 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 AURKCQ9UQB9 309 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 POLR2MP0CAP2 368 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 GSTA3Q16772 222 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 GPR141Q7Z602 305 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 STAMQ92783 540 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 BIN2Q9UBW5 565 aaPredicted RBP12.94□□□□□ -0.34
SHANK2-218ENST00000601538 CFAP69A5D8W1 941 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 GCLCP48506 637 aaPredicted RBP12.94□□□□□ -0.34
SHANK2-218ENST00000601538 LRRC49Q8IUZ0 686 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 LMCD1Q9NZU5 365 aa12.94□□□□□ -0.34
SHANK2-218ENST00000601538 MTRF1O75570 445 aaKnown RBP12.93□□□□□ -0.34
SHANK2-218ENST00000601538 TRIM49P0CI25 452 aa12.93□□□□□ -0.34
SHANK2-218ENST00000601538 TRIM49CP0CI26 452 aa12.93□□□□□ -0.34
SHANK2-218ENST00000601538 KCNA1Q09470 495 aa12.93□□□□□ -0.34
SHANK2-218ENST00000601538 STAT4Q14765 748 aa12.93□□□□□ -0.34
SHANK2-218ENST00000601538 CLEC4FQ8N1N0 589 aa12.93□□□□□ -0.34
SHANK2-218ENST00000601538 FTCDO95954 541 aa12.93□□□□□ -0.34
SHANK2-218ENST00000601538 DPCR1Q3MIW9 517 aa12.93□□□□□ -0.34
SHANK2-218ENST00000601538 FANCBQ8NB91 859 aa12.93□□□□□ -0.34
SHANK2-218ENST00000601538 CDC26Q8NHZ8 85 aa12.93□□□□□ -0.34
SHANK2-218ENST00000601538 ULK4Q96C45 1275 aa12.93□□□□□ -0.34
SHANK2-218ENST00000601538 VPS50Q96JG6 964 aa12.93□□□□□ -0.34
SHANK2-218ENST00000601538 DCAF5Q96JK2 942 aa12.93□□□□□ -0.34
SHANK2-218ENST00000601538 ANO3Q9BYT9 981 aa12.93□□□□□ -0.34
SHANK2-218ENST00000601538 RHBDL2Q9NX52 303 aa12.93□□□□□ -0.34
SHANK2-218ENST00000601538 ATXN3P54252 364 aaPredicted RBP12.93□□□□□ -0.34
SHANK2-218ENST00000601538 ZCWPW2Q504Y3 356 aa12.93□□□□□ -0.34
SHANK2-218ENST00000601538 WNT8AQ9H1J5 351 aa12.93□□□□□ -0.34
SHANK2-218ENST00000601538 PCDH11XQ9BZA7 1347 aa12.93□□□□□ -0.34
SHANK2-218ENST00000601538 PCDH11YQ9BZA8 1340 aa12.93□□□□□ -0.34
SHANK2-218ENST00000601538 LRRN2O75325 713 aa12.93□□□□□ -0.34
SHANK2-218ENST00000601538 SCTRP47872 440 aa12.93□□□□□ -0.34
SHANK2-218ENST00000601538 PURAQ00577 322 aaKnown RBP12.93□□□□□ -0.34
SHANK2-218ENST00000601538 TRMT5Q32P41 509 aaKnown RBP12.93□□□□□ -0.34
SHANK2-218ENST00000601538 IRGCQ6NXR0 463 aa12.93□□□□□ -0.34
SHANK2-218ENST00000601538 GJA10Q969M2 543 aa12.93□□□□□ -0.34
SHANK2-218ENST00000601538 TRIM54Q9BYV2 358 aa12.93□□□□□ -0.34
SHANK2-218ENST00000601538 TRPC7Q9HCX4 862 aa12.93□□□□□ -0.34
SHANK2-218ENST00000601538 PARP3Q9Y6F1 533 aa12.93□□□□□ -0.34
SHANK2-218ENST00000601538 FMNL1O95466 1100 aaPredicted RBP12.93□□□□□ -0.34
SHANK2-218ENST00000601538 BRAFP15056 766 aa12.93□□□□□ -0.34
SHANK2-218ENST00000601538 PPARAQ07869 468 aa12.93□□□□□ -0.34
SHANK2-218ENST00000601538 IL17RAQ96F46 866 aa12.93□□□□□ -0.34
SHANK2-218ENST00000601538 NFKBIL1Q9UBC1 381 aaPredicted RBP12.93□□□□□ -0.34
SHANK2-218ENST00000601538 NSFL1CQ9UNZ2 370 aaKnown RBP12.93□□□□□ -0.34
SHANK2-218ENST00000601538 RCAN1P53805 252 aa12.93□□□□□ -0.34
SHANK2-218ENST00000601538 SZRD1Q7Z422 152 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms