RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 TDRD15B5MCY1 1934 aaKnown RBP9.74□□□□□ -0.85
SSBP4-208ENST00000600628 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.73□□□□□ -0.85
SSBP4-208ENST00000600628 ARHGEF35A5YM69 484 aa9.73□□□□□ -0.85
SSBP4-208ENST00000600628 ABLIM1O14639 778 aa9.73□□□□□ -0.85
SSBP4-208ENST00000600628 GRM6O15303 877 aa9.73□□□□□ -0.85
SSBP4-208ENST00000600628 B4GALT3O60512 393 aa9.73□□□□□ -0.85
SSBP4-208ENST00000600628 OFD1O75665 1012 aa9.73□□□□□ -0.85
SSBP4-208ENST00000600628 ITGB1P05556 798 aa9.73□□□□□ -0.85
SSBP4-208ENST00000600628 SKIP12755 728 aa9.73□□□□□ -0.85
SSBP4-208ENST00000600628 DNAJB1P25685 340 aa9.73□□□□□ -0.85
SSBP4-208ENST00000600628 PLCB3Q01970 1234 aa9.73□□□□□ -0.85
SSBP4-208ENST00000600628 GPM6BQ13491 265 aa9.73□□□□□ -0.85
SSBP4-208ENST00000600628 PKP1Q13835 747 aa9.73□□□□□ -0.85
SSBP4-208ENST00000600628 CTC1Q2NKJ3 1217 aa9.73□□□□□ -0.85
SSBP4-208ENST00000600628 NOTUMQ6P988 496 aa9.73□□□□□ -0.85
SSBP4-208ENST00000600628 CABP7Q86V35 215 aa9.73□□□□□ -0.85
SSBP4-208ENST00000600628 HSCBQ8IWL3 235 aa9.73□□□□□ -0.85
SSBP4-208ENST00000600628 GSTCDQ8NEC7 633 aa9.73□□□□□ -0.85
SSBP4-208ENST00000600628 SPIRE2Q8WWL2 714 aa9.73□□□□□ -0.85
SSBP4-208ENST00000600628 FIZ1Q96SL8 496 aa9.73□□□□□ -0.85
SSBP4-208ENST00000600628 C11orf84Q9BUA3 381 aaPredicted RBP9.73□□□□□ -0.85
SSBP4-208ENST00000600628 COL25A1Q9BXS0 654 aaPredicted RBP9.73□□□□□ -0.85
SSBP4-208ENST00000600628 PTPRHQ9HD43 1115 aa9.73□□□□□ -0.85
SSBP4-208ENST00000600628 TYW1Q9NV66 732 aaKnown RBP9.73□□□□□ -0.85
SSBP4-208ENST00000600628 THEGQ9P2T0 379 aa9.73□□□□□ -0.85
SSBP4-208ENST00000600628 LRFN2Q9ULH4 789 aa9.73□□□□□ -0.85
SSBP4-208ENST00000600628 ACKR2O00590 384 aa9.72□□□□□ -0.85
SSBP4-208ENST00000600628 B4GALT5O43286 388 aa9.72□□□□□ -0.85
SSBP4-208ENST00000600628 HIP1RO75146 1068 aa9.72□□□□□ -0.85
SSBP4-208ENST00000600628 PPP6R2O75170 966 aa9.72□□□□□ -0.85
SSBP4-208ENST00000600628 BRD1O95696 1058 aa9.72□□□□□ -0.85
SSBP4-208ENST00000600628 ZSCAN22P10073 491 aaPredicted RBP9.72□□□□□ -0.85
SSBP4-208ENST00000600628 DDIT3P35638 169 aa9.72□□□□□ -0.85
SSBP4-208ENST00000600628 NPTX2P47972 431 aa9.72□□□□□ -0.85
SSBP4-208ENST00000600628 AFF1P51825 1210 aaKnown RBP9.72□□□□□ -0.85
SSBP4-208ENST00000600628 EFNA5P52803 228 aa9.72□□□□□ -0.85
SSBP4-208ENST00000600628 MRPS5P82675 430 aaKnown RBP9.72□□□□□ -0.85
SSBP4-208ENST00000600628 UBE3AQ05086 875 aa9.72□□□□□ -0.85
SSBP4-208ENST00000600628 PPP2R5AQ15172 486 aa9.72□□□□□ -0.85
SSBP4-208ENST00000600628 SKIV2LQ15477 1246 aaKnown RBP9.72□□□□□ -0.85
SSBP4-208ENST00000600628 PTPROQ16827 1216 aa9.72□□□□□ -0.85
SSBP4-208ENST00000600628 TJAP1Q5JTD0 557 aa9.72□□□□□ -0.85
SSBP4-208ENST00000600628 AXDND1Q5T1B0 1012 aaPredicted RBP9.72□□□□□ -0.85
SSBP4-208ENST00000600628 ATL3Q6DD88 541 aa9.72□□□□□ -0.85
SSBP4-208ENST00000600628 TWF2Q6IBS0 349 aaKnown RBP9.72□□□□□ -0.85
SSBP4-208ENST00000600628 KLHL23Q8NBE8 558 aa9.72□□□□□ -0.85
SSBP4-208ENST00000600628 COLGALT1Q8NBJ5 622 aa9.72□□□□□ -0.85
SSBP4-208ENST00000600628 CNNM3Q8NE01 707 aa9.72□□□□□ -0.85
SSBP4-208ENST00000600628 EPSTI1Q96J88 318 aa9.72□□□□□ -0.85
SSBP4-208ENST00000600628 SCLT1Q96NL6 688 aa9.72□□□□□ -0.85
SSBP4-208ENST00000600628 ASB2Q96Q27 587 aa9.72□□□□□ -0.85
SSBP4-208ENST00000600628 EIF2AQ9BY44 585 aaKnown RBP9.72□□□□□ -0.85
SSBP4-208ENST00000600628 C2orf40Q9H1Z8 148 aa9.72□□□□□ -0.85
SSBP4-208ENST00000600628 RNF39Q9H2S5 420 aa9.72□□□□□ -0.85
SSBP4-208ENST00000600628 TMEM134Q9H6X4 195 aa9.72□□□□□ -0.85
SSBP4-208ENST00000600628 FOXD4L1Q9NU39 408 aa9.72□□□□□ -0.85
SSBP4-208ENST00000600628 PRMT7Q9NVM4 692 aaPredicted RBP9.72□□□□□ -0.85
SSBP4-208ENST00000600628 LZTS1Q9Y250 596 aa9.72□□□□□ -0.85
SSBP4-208ENST00000600628 IPPQ9Y573 584 aa9.72□□□□□ -0.85
SSBP4-208ENST00000600628 PDCD11Q14690 1871 aaKnown RBP9.72□□□□□ -0.85
SSBP4-208ENST00000600628 CITO14578 2027 aa9.72□□□□□ -0.85
SSBP4-208ENST00000600628 A0A087X0B3 334 aa9.71□□□□□ -0.86
SSBP4-208ENST00000600628 TBKBP1A7MCY6 615 aa9.71□□□□□ -0.86
SSBP4-208ENST00000600628 FSCN2O14926 492 aa9.71□□□□□ -0.86
SSBP4-208ENST00000600628 YEATS4O95619 227 aa9.71□□□□□ -0.86
SSBP4-208ENST00000600628 F13A1P00488 732 aa9.71□□□□□ -0.86
SSBP4-208ENST00000600628 PLA2G4BP0C869 781 aa9.71□□□□□ -0.86
SSBP4-208ENST00000600628 PLCG1P19174 1290 aa9.71□□□□□ -0.86
SSBP4-208ENST00000600628 IBSPP21815 317 aaPredicted RBP9.71□□□□□ -0.86
SSBP4-208ENST00000600628 PROZP22891 400 aa9.71□□□□□ -0.86
SSBP4-208ENST00000600628 CTNNB1P35222 781 aa9.71□□□□□ -0.86
SSBP4-208ENST00000600628 UBA7P41226 1012 aa9.71□□□□□ -0.86
SSBP4-208ENST00000600628 DSC1Q08554 894 aa9.71□□□□□ -0.86
SSBP4-208ENST00000600628 KCNC3Q14003 757 aa9.71□□□□□ -0.86
SSBP4-208ENST00000600628 KARSQ15046 597 aaKnown RBP9.71□□□□□ -0.86
SSBP4-208ENST00000600628 NAB2Q15742 525 aa9.71□□□□□ -0.86
SSBP4-208ENST00000600628 CSPP1Q1MSJ5 1256 aa9.71□□□□□ -0.86
SSBP4-208ENST00000600628 PAN2Q504Q3 1202 aaKnown RBP9.71□□□□□ -0.86
SSBP4-208ENST00000600628 NT5DC1Q5TFE4 455 aa9.71□□□□□ -0.86
SSBP4-208ENST00000600628 SLC27A1Q6PCB7 646 aa9.71□□□□□ -0.86
SSBP4-208ENST00000600628 LRRC43Q8N309 656 aa9.71□□□□□ -0.86
SSBP4-208ENST00000600628 TMEM161BQ8NDZ6 487 aa9.71□□□□□ -0.86
SSBP4-208ENST00000600628 HELQQ8TDG4 1101 aa9.71□□□□□ -0.86
SSBP4-208ENST00000600628 RAD54LQ92698 747 aa9.71□□□□□ -0.86
SSBP4-208ENST00000600628 SYMPKQ92797 1274 aaKnown RBP9.71□□□□□ -0.86
SSBP4-208ENST00000600628 LPPQ93052 612 aa9.71□□□□□ -0.86
SSBP4-208ENST00000600628 DRC1Q96MC2 740 aa9.71□□□□□ -0.86
SSBP4-208ENST00000600628 CLIC6Q96NY7 704 aa9.71□□□□□ -0.86
SSBP4-208ENST00000600628 PDZD7Q9H5P4 517 aa9.71□□□□□ -0.86
SSBP4-208ENST00000600628 POLD4Q9HCU8 107 aa9.71□□□□□ -0.86
SSBP4-208ENST00000600628 TBC1D13Q9NVG8 400 aa9.71□□□□□ -0.86
SSBP4-208ENST00000600628 ODF2LQ9ULJ1 636 aa9.71□□□□□ -0.86
SSBP4-208ENST00000600628 COG5Q9UP83 839 aa9.71□□□□□ -0.86
SSBP4-208ENST00000600628 FRMD3A2A2Y4 597 aa9.7□□□□□ -0.86
SSBP4-208ENST00000600628 LRRIQ4A6NIV6 560 aa9.7□□□□□ -0.86
SSBP4-208ENST00000600628 INO80B-WBP1J3KQ70 363 aa9.7□□□□□ -0.86
SSBP4-208ENST00000600628 ERLIN2O94905 339 aa9.7□□□□□ -0.86
SSBP4-208ENST00000600628 LAG3P18627 525 aa9.7□□□□□ -0.86
SSBP4-208ENST00000600628 MARCKSP29966 332 aaPredicted RBP9.7□□□□□ -0.86
SSBP4-208ENST00000600628 LTBRP36941 435 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms