RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 SRGAP2CP0DJJ0 459 aa16.41■□□□□ 0.22
IRF3-223ENST00000599223 GCFC2P16383 781 aaKnown RBP16.41■□□□□ 0.22
IRF3-223ENST00000599223 YWHABP31946 246 aaKnown RBP16.41■□□□□ 0.22
IRF3-223ENST00000599223 CYP4A11Q02928 519 aa16.41■□□□□ 0.22
IRF3-223ENST00000599223 LAMTOR4Q0VGL1 99 aa16.41■□□□□ 0.22
IRF3-223ENST00000599223 NR5A1Q13285 461 aa16.41■□□□□ 0.22
IRF3-223ENST00000599223 NCAPH2Q6IBW4 605 aa16.41■□□□□ 0.22
IRF3-223ENST00000599223 KREMEN2Q8NCW0 462 aa16.41■□□□□ 0.22
IRF3-223ENST00000599223 PSPC1Q8WXF1 523 aaKnown RBP16.41■□□□□ 0.22
IRF3-223ENST00000599223 TNFRSF25Q93038 417 aa16.41■□□□□ 0.22
IRF3-223ENST00000599223 INO80BQ9C086 356 aaPredicted RBP16.41■□□□□ 0.22
IRF3-223ENST00000599223 SLKQ9H2G2 1235 aaPredicted RBP16.41■□□□□ 0.22
IRF3-223ENST00000599223 XPNPEP1Q9NQW7 623 aa16.41■□□□□ 0.22
IRF3-223ENST00000599223 IRAK3Q9Y616 596 aa16.41■□□□□ 0.22
IRF3-223ENST00000599223 DMDP11532 3685 aa16.4■□□□□ 0.22
IRF3-223ENST00000599223 CDKL5O76039 1030 aa16.4■□□□□ 0.22
IRF3-223ENST00000599223 ASGR2P07307 311 aa16.4■□□□□ 0.22
IRF3-223ENST00000599223 SKIP12755 728 aa16.4■□□□□ 0.22
IRF3-223ENST00000599223 RFC5P40937 340 aa16.4■□□□□ 0.22
IRF3-223ENST00000599223 RNASELQ05823 741 aaKnown RBP16.4■□□□□ 0.22
IRF3-223ENST00000599223 ITIH3Q06033 890 aa16.4■□□□□ 0.22
IRF3-223ENST00000599223 CTTNQ14247 550 aaKnown RBP16.4■□□□□ 0.22
IRF3-223ENST00000599223 KIAA1841Q6NSI8 718 aa16.4■□□□□ 0.22
IRF3-223ENST00000599223 CES5AQ6NT32 575 aa16.4■□□□□ 0.22
IRF3-223ENST00000599223 C4orf19Q8IY42 314 aa16.4■□□□□ 0.22
IRF3-223ENST00000599223 DYDC2Q96IM9 177 aa16.4■□□□□ 0.22
IRF3-223ENST00000599223 NECTIN4Q96NY8 510 aa16.4■□□□□ 0.22
IRF3-223ENST00000599223 JPH2Q9BR39 696 aaPredicted RBP16.4■□□□□ 0.22
IRF3-223ENST00000599223 MARCH5Q9NX47 278 aa16.4■□□□□ 0.22
IRF3-223ENST00000599223 TBX3O15119 743 aa16.39■□□□□ 0.21
IRF3-223ENST00000599223 POMCP01189 267 aa16.39■□□□□ 0.21
IRF3-223ENST00000599223 SSBP05455 408 aaKnown RBP eCLIP16.39■□□□□ 0.21
IRF3-223ENST00000599223 FDPSP14324 419 aaKnown RBP16.39■□□□□ 0.21
IRF3-223ENST00000599223 EPHA7Q15375 998 aa16.39■□□□□ 0.21
IRF3-223ENST00000599223 TMC5Q6UXY8 1006 aa16.39■□□□□ 0.21
IRF3-223ENST00000599223 MRPL10Q7Z7H8 261 aaKnown RBP16.39■□□□□ 0.21
IRF3-223ENST00000599223 ZBTB33Q86T24 672 aa16.39■□□□□ 0.21
IRF3-223ENST00000599223 FERMT3Q86UX7 667 aa16.39■□□□□ 0.21
IRF3-223ENST00000599223 RNF149Q8NC42 400 aa16.39■□□□□ 0.21
IRF3-223ENST00000599223 SMG8Q8ND04 991 aaKnown RBP16.39■□□□□ 0.21
IRF3-223ENST00000599223 RSPH1Q8WYR4 309 aa16.39■□□□□ 0.21
IRF3-223ENST00000599223 EIF2AQ9BY44 585 aaKnown RBP16.39■□□□□ 0.21
IRF3-223ENST00000599223 RSAD1Q9HA92 442 aa16.39■□□□□ 0.21
IRF3-223ENST00000599223 FAM86C1Q9NVL1 165 aa16.39■□□□□ 0.21
IRF3-223ENST00000599223 DZANK1Q9NVP4 752 aa16.39■□□□□ 0.21
IRF3-223ENST00000599223 NR2E1Q9Y466 385 aa16.39■□□□□ 0.21
IRF3-223ENST00000599223 F8W810 466 aa16.38■□□□□ 0.21
IRF3-223ENST00000599223 TSPAN1O60635 241 aa16.38■□□□□ 0.21
IRF3-223ENST00000599223 MTHFRP42898 656 aa16.38■□□□□ 0.21
IRF3-223ENST00000599223 AK2P54819 239 aa16.38■□□□□ 0.21
IRF3-223ENST00000599223 PTPN5P54829 565 aa16.38■□□□□ 0.21
IRF3-223ENST00000599223 XKR9Q5GH70 373 aa16.38■□□□□ 0.21
IRF3-223ENST00000599223 SRGAP1Q7Z6B7 1085 aa16.38■□□□□ 0.21
IRF3-223ENST00000599223 NECAB1Q8N987 351 aa16.38■□□□□ 0.21
IRF3-223ENST00000599223 URGCPQ8TCY9 931 aa16.38■□□□□ 0.21
IRF3-223ENST00000599223 ASAP3Q8TDY4 903 aa16.38■□□□□ 0.21
IRF3-223ENST00000599223 ORC3Q9UBD5 711 aaPredicted RBP16.38■□□□□ 0.21
IRF3-223ENST00000599223 SORCS3Q9UPU3 1222 aa16.38■□□□□ 0.21
IRF3-223ENST00000599223 HES2Q9Y543 173 aa16.38■□□□□ 0.21
IRF3-223ENST00000599223 PPME1Q9Y570 386 aa16.38■□□□□ 0.21
IRF3-223ENST00000599223 DOCK8Q8NF50 2099 aa16.38■□□□□ 0.21
IRF3-223ENST00000599223 LILRB3O75022 631 aa16.37■□□□□ 0.21
IRF3-223ENST00000599223 CNPP09543 421 aaKnown RBP16.37■□□□□ 0.21
IRF3-223ENST00000599223 NCLP19338 710 aaKnown RBP16.37■□□□□ 0.21
IRF3-223ENST00000599223 AVPR2P30518 371 aa16.37■□□□□ 0.21
IRF3-223ENST00000599223 FOSBP53539 338 aa16.37■□□□□ 0.21
IRF3-223ENST00000599223 MTMR3Q13615 1198 aa16.37■□□□□ 0.21
IRF3-223ENST00000599223 TDRD5Q8NAT2 981 aaKnown RBP16.37■□□□□ 0.21
IRF3-223ENST00000599223 PGBD4Q96DM1 585 aa16.37■□□□□ 0.21
IRF3-223ENST00000599223 CPB2Q96IY4 423 aa16.37■□□□□ 0.21
IRF3-223ENST00000599223 RIPOR3Q96MK2 946 aa16.37■□□□□ 0.21
IRF3-223ENST00000599223 MTRQ99707 1265 aa16.37■□□□□ 0.21
IRF3-223ENST00000599223 RNF39Q9H2S5 420 aa16.37■□□□□ 0.21
IRF3-223ENST00000599223 ZSWIM4Q9H7M6 989 aa16.37■□□□□ 0.21
IRF3-223ENST00000599223 PRG3Q9Y2Y8 225 aaPredicted RBP16.37■□□□□ 0.21
IRF3-223ENST00000599223 IPPQ9Y573 584 aa16.37■□□□□ 0.21
IRF3-223ENST00000599223 CNTNAP2Q9UHC6 1331 aa16.37■□□□□ 0.21
IRF3-223ENST00000599223 NRP1O14786 923 aa16.36■□□□□ 0.21
IRF3-223ENST00000599223 DKC1O60832 514 aaKnown RBP eCLIP16.36■□□□□ 0.219e-9■■■□□ 15.7
IRF3-223ENST00000599223 SLITRK3O94933 977 aa16.36■□□□□ 0.21
IRF3-223ENST00000599223 KRT2P35908 639 aa16.36■□□□□ 0.21
IRF3-223ENST00000599223 MLH1P40692 756 aa16.36■□□□□ 0.21
IRF3-223ENST00000599223 CLCN4P51793 760 aa16.36■□□□□ 0.21
IRF3-223ENST00000599223 PTENP60484 403 aa16.36■□□□□ 0.21
IRF3-223ENST00000599223 MBTD1Q05BQ5 628 aa16.36■□□□□ 0.21
IRF3-223ENST00000599223 ST3GAL1Q11201 340 aa16.36■□□□□ 0.21
IRF3-223ENST00000599223 CAPSQ13938 189 aa16.36■□□□□ 0.21
IRF3-223ENST00000599223 GIT2Q14161 759 aa16.36■□□□□ 0.21
IRF3-223ENST00000599223 AMHR2Q16671 573 aa16.36■□□□□ 0.21
IRF3-223ENST00000599223 ME3Q16798 604 aa16.36■□□□□ 0.21
IRF3-223ENST00000599223 CABP7Q86V35 215 aa16.36■□□□□ 0.21
IRF3-223ENST00000599223 TPH2Q8IWU9 490 aa16.36■□□□□ 0.21
IRF3-223ENST00000599223 ZFP42Q96MM3 310 aa16.36■□□□□ 0.21
IRF3-223ENST00000599223 KLHL5Q96PQ7 755 aa16.36■□□□□ 0.21
IRF3-223ENST00000599223 GAD1Q99259 594 aa16.36■□□□□ 0.21
IRF3-223ENST00000599223 EIF2AK1Q9BQI3 630 aaKnown RBP16.36■□□□□ 0.21
IRF3-223ENST00000599223 NXF3Q9H4D5 531 aaKnown RBP16.36■□□□□ 0.21
IRF3-223ENST00000599223 SFXN1Q9H9B4 322 aa16.36■□□□□ 0.21
IRF3-223ENST00000599223 DBR1Q9UK59 544 aaKnown RBP16.36■□□□□ 0.21
IRF3-223ENST00000599223 A0A087WWV3 80 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms