RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 AGMOQ6ZNB7 445 aa23.31■■□□□ 1.32
PNKP-209ENST00000596726 LRRC43Q8N309 656 aa23.31■■□□□ 1.32
PNKP-209ENST00000596726 COLGALT1Q8NBJ5 622 aa23.31■■□□□ 1.32
PNKP-209ENST00000596726 CNNM3Q8NE01 707 aa23.31■■□□□ 1.32
PNKP-209ENST00000596726 SPPL3Q8TCT6 385 aa23.31■■□□□ 1.32
PNKP-209ENST00000596726 LRRC15Q8TF66 581 aa23.31■■□□□ 1.32
PNKP-209ENST00000596726 CALML4Q96GE6 196 aa23.31■■□□□ 1.32
PNKP-209ENST00000596726 IFT74Q96LB3 600 aa23.31■■□□□ 1.32
PNKP-209ENST00000596726 TIPINQ9BVW5 301 aa23.31■■□□□ 1.32
PNKP-209ENST00000596726 CCDC113Q9H0I3 377 aa23.31■■□□□ 1.32
PNKP-209ENST00000596726 AAASQ9NRG9 546 aa23.31■■□□□ 1.32
PNKP-209ENST00000596726 PCDHB12Q9Y5F1 795 aa23.31■■□□□ 1.32
PNKP-209ENST00000596726 A0A1B0GUA9 196 aa23.3■■□□□ 1.32
PNKP-209ENST00000596726 HIP1RO75146 1068 aa23.3■■□□□ 1.32
PNKP-209ENST00000596726 OFD1O75665 1012 aa23.3■■□□□ 1.32
PNKP-209ENST00000596726 PLA2G4BP0C869 781 aa23.3■■□□□ 1.32
PNKP-209ENST00000596726 LAG3P18627 525 aa23.3■■□□□ 1.32
PNKP-209ENST00000596726 NASPP49321 788 aaPredicted RBP23.3■■□□□ 1.32
PNKP-209ENST00000596726 CEBPZQ03701 1054 aaKnown RBP23.3■■□□□ 1.32
PNKP-209ENST00000596726 CAMK1Q14012 370 aa23.3■■□□□ 1.32
PNKP-209ENST00000596726 LONRF3Q496Y0 759 aa23.3■■□□□ 1.32
PNKP-209ENST00000596726 SPOUT1Q5T280 376 aaKnown RBP23.3■■□□□ 1.32
PNKP-209ENST00000596726 SMG8Q8ND04 991 aaKnown RBP23.3■■□□□ 1.32
PNKP-209ENST00000596726 DEPTORQ8TB45 409 aa23.3■■□□□ 1.32
PNKP-209ENST00000596726 EIF2AQ9BY44 585 aaKnown RBP23.3■■□□□ 1.32
PNKP-209ENST00000596726 MRPL9Q9BYD2 267 aaKnown RBP23.3■■□□□ 1.32
PNKP-209ENST00000596726 ALG13Q9NP73 1137 aaKnown RBP23.3■■□□□ 1.32
PNKP-209ENST00000596726 BLOC1S4Q9NUP1 217 aa23.3■■□□□ 1.32
PNKP-209ENST00000596726 ZSCAN22P10073 491 aaPredicted RBP23.29■■□□□ 1.32
PNKP-209ENST00000596726 KARSQ15046 597 aaKnown RBP23.29■■□□□ 1.32
PNKP-209ENST00000596726 CSPP1Q1MSJ5 1256 aa23.29■■□□□ 1.32
PNKP-209ENST00000596726 SPRYD3Q8NCJ5 442 aa23.29■■□□□ 1.32
PNKP-209ENST00000596726 DRC1Q96MC2 740 aa23.29■■□□□ 1.32
PNKP-209ENST00000596726 KCND2Q9NZV8 630 aa23.29■■□□□ 1.32
PNKP-209ENST00000596726 IPPQ9Y573 584 aa23.29■■□□□ 1.32
PNKP-209ENST00000596726 CNTNAP2Q9UHC6 1331 aa23.29■■□□□ 1.32
PNKP-209ENST00000596726 DNAJB1P25685 340 aa23.28■■□□□ 1.32
PNKP-209ENST00000596726 NPTX2P47972 431 aa23.28■■□□□ 1.32
PNKP-209ENST00000596726 EFNA5P52803 228 aa23.28■■□□□ 1.32
PNKP-209ENST00000596726 MAPK6Q16659 721 aa23.28■■□□□ 1.32
PNKP-209ENST00000596726 TIGD5Q53EQ6 642 aa23.28■■□□□ 1.32
PNKP-209ENST00000596726 ARSHQ5FYA8 562 aa23.28■■□□□ 1.32
PNKP-209ENST00000596726 GLB1LQ6UWU2 654 aa23.28■■□□□ 1.32
PNKP-209ENST00000596726 USP49Q70CQ1 688 aa23.28■■□□□ 1.32
PNKP-209ENST00000596726 EPSTI1Q96J88 318 aa23.28■■□□□ 1.32
PNKP-209ENST00000596726 CLIC6Q96NY7 704 aa23.28■■□□□ 1.32
PNKP-209ENST00000596726 KIFC3Q9BVG8 833 aa23.28■■□□□ 1.32
PNKP-209ENST00000596726 C17orf75Q9HAS0 396 aa23.28■■□□□ 1.32
PNKP-209ENST00000596726 BRWD1Q9NSI6 2320 aa23.27■■□□□ 1.32
PNKP-209ENST00000596726 TTLL13PA6NNM8 815 aa23.27■■□□□ 1.32
PNKP-209ENST00000596726 ACKR2O00590 384 aa23.27■■□□□ 1.32
PNKP-209ENST00000596726 F13A1P00488 732 aa23.27■■□□□ 1.32
PNKP-209ENST00000596726 EDN1P05305 212 aa23.27■■□□□ 1.32
PNKP-209ENST00000596726 SSBP05455 408 aaKnown RBP eCLIP23.27■■□□□ 1.32
PNKP-209ENST00000596726 PRKCBP05771 671 aa23.27■■□□□ 1.32
PNKP-209ENST00000596726 PLCG1P19174 1290 aa23.27■■□□□ 1.32
PNKP-209ENST00000596726 PEX3P56589 373 aa23.27■■□□□ 1.32
PNKP-209ENST00000596726 PKP1Q13835 747 aa23.27■■□□□ 1.32
PNKP-209ENST00000596726 NOMO2Q5JPE7 1267 aa23.27■■□□□ 1.32
PNKP-209ENST00000596726 SPECC1Q5M775 1068 aa23.27■■□□□ 1.32
PNKP-209ENST00000596726 SLC27A1Q6PCB7 646 aa23.27■■□□□ 1.32
PNKP-209ENST00000596726 KCNT2Q6UVM3 1135 aa23.27■■□□□ 1.32
PNKP-209ENST00000596726 LINC00301Q8NCQ3 95 aa23.27■■□□□ 1.32
PNKP-209ENST00000596726 RNF39Q9H2S5 420 aa23.27■■□□□ 1.32
PNKP-209ENST00000596726 NSUN3Q9H649 340 aaKnown RBP23.27■■□□□ 1.32
PNKP-209ENST00000596726 RSAD1Q9HA92 442 aa23.27■■□□□ 1.32
PNKP-209ENST00000596726 TBC1D13Q9NVG8 400 aa23.27■■□□□ 1.32
PNKP-209ENST00000596726 THEGQ9P2T0 379 aa23.27■■□□□ 1.32
PNKP-209ENST00000596726 FGF18O76093 207 aa23.26■■□□□ 1.31
PNKP-209ENST00000596726 ITGA4P13612 1032 aa23.26■■□□□ 1.31
PNKP-209ENST00000596726 PLCB3Q01970 1234 aa23.26■■□□□ 1.31
PNKP-209ENST00000596726 UBE3AQ05086 875 aa23.26■■□□□ 1.31
PNKP-209ENST00000596726 PRPF4BQ13523 1007 aaKnown RBP23.26■■□□□ 1.31
PNKP-209ENST00000596726 SKIV2LQ15477 1246 aaKnown RBP23.26■■□□□ 1.31
PNKP-209ENST00000596726 FOXD4L5Q5VV16 416 aaPredicted RBP23.26■■□□□ 1.31
PNKP-209ENST00000596726 CDR2LQ86X02 465 aaPredicted RBP23.26■■□□□ 1.31
PNKP-209ENST00000596726 POF1BQ8WVV4 589 aa23.26■■□□□ 1.31
PNKP-209ENST00000596726 FOXD4L4Q8WXT5 416 aaPredicted RBP23.26■■□□□ 1.31
PNKP-209ENST00000596726 RAD54LQ92698 747 aa23.26■■□□□ 1.31
PNKP-209ENST00000596726 ZNF396Q96N95 335 aaPredicted RBP23.26■■□□□ 1.31
PNKP-209ENST00000596726 ZNF558Q96NG5 402 aa23.26■■□□□ 1.31
PNKP-209ENST00000596726 NTPCRQ9BSD7 190 aaKnown RBP23.26■■□□□ 1.31
PNKP-209ENST00000596726 UBN1Q9NPG3 1134 aa23.26■■□□□ 1.31
PNKP-209ENST00000596726 ARHGAP28Q9P2N2 729 aa23.26■■□□□ 1.31
PNKP-209ENST00000596726 TFIP11Q9UBB9 837 aaKnown RBP23.26■■□□□ 1.31
PNKP-209ENST00000596726 CCDC169A6NNP5 214 aa23.25■■□□□ 1.31
PNKP-209ENST00000596726 INPPL1O15357 1258 aa23.25■■□□□ 1.31
PNKP-209ENST00000596726 AFF1P51825 1210 aaKnown RBP23.25■■□□□ 1.31
PNKP-209ENST00000596726 TCEAL5Q5H9L2 206 aa23.25■■□□□ 1.31
PNKP-209ENST00000596726 THNSL1Q8IYQ7 743 aa23.25■■□□□ 1.31
PNKP-209ENST00000596726 KRI1Q8N9T8 703 aaKnown RBP23.25■■□□□ 1.31
PNKP-209ENST00000596726 ATXN2LQ8WWM7 1075 aaKnown RBP23.25■■□□□ 1.31
PNKP-209ENST00000596726 SYMPKQ92797 1274 aaKnown RBP23.25■■□□□ 1.31
PNKP-209ENST00000596726 PDZD7Q9H5P4 517 aa23.25■■□□□ 1.31
PNKP-209ENST00000596726 TMEM134Q9H6X4 195 aa23.25■■□□□ 1.31
PNKP-209ENST00000596726 NRDE2Q9H7Z3 1164 aa23.25■■□□□ 1.31
PNKP-209ENST00000596726 INPP5FQ9Y2H2 1132 aa23.25■■□□□ 1.31
PNKP-209ENST00000596726 HES2Q9Y543 173 aa23.25■■□□□ 1.31
PNKP-209ENST00000596726 XIRP2A4UGR9 3374 aa23.25■■□□□ 1.31
PNKP-209ENST00000596726 TDRD15B5MCY1 1934 aaKnown RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms