RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 POTEJP0CG39 1038 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 KCNA2P16389 499 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 EIF4A3P38919 411 aaKnown RBP13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 MAGEA1P43355 309 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 KIF11P52732 1056 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 MAGOHP61326 146 aaKnown RBP13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 CCDC153Q494R4 210 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 NEPROQ6NW34 567 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 OTUD6AQ7L8S5 288 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 GATA6Q92908 595 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 MAGOHBQ96A72 148 aaKnown RBP13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 EPB41L5Q9HCM4 733 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 BTBD7Q9P203 1132 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 SEC63Q9UGP8 760 aaKnown RBP13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 TDRKHQ9Y2W6 561 aaKnown RBP13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 PCDHA13Q9Y5I0 950 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 TOGARAM1Q9Y4F4 1720 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 POTEFA5A3E0 1075 aa13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 MARCH6O60337 910 aa13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 SHBGP04278 402 aa13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 POTEIP0CG38 1075 aa13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 C6orf183Q5T699 404 aa13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 NFRKBQ6P4R8 1299 aa13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 GDAP1Q8TB36 358 aa13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 MDM1Q8TC05 714 aa13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 TGFBRAP1Q8WUH2 860 aa13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 MPP4Q96JB8 637 aa13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 CNOT10Q9H9A5 744 aaKnown RBP13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 LARSQ9P2J5 1176 aaKnown RBP13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 SNX12Q9UMY4 172 aa13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 BUB1O43683 1085 aa13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 GLI1P08151 1106 aa13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 DAB2IPQ5VWQ8 1189 aa13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 SV2BQ7L1I2 683 aa13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 RBM46Q8TBY0 533 aaKnown RBP13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 IRGQQ8WZA9 623 aa13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 PBKQ96KB5 322 aa13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 CEP295NLQ96MC4 621 aa13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 C6orf50Q9HD87 102 aa13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 GDF3Q9NR23 364 aa13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 BARHL2Q9NY43 387 aa13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 EHD2Q9NZN4 543 aa13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 DUOX1Q9NRD9 1551 aa13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 NUP98P52948 1817 aa13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 ZSCAN5CA6NGD5 496 aaPredicted RBP13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 LAD1O00515 517 aa13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 NKRFO15226 690 aaKnown RBP eCLIP13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 CYTH3O43739 400 aa13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 TTLL12Q14166 644 aaPredicted RBP13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 DIXDC1Q155Q3 683 aa13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 FBXO33Q7Z6M2 555 aa13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 LRRC34Q8IZ02 419 aa13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 CUEDC2Q9H467 287 aa13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 QPCTLQ9NXS2 382 aa13.11□□□□□ -0.31
SMARCA4-217ENST00000591595 ZPR1O75312 459 aa13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 SLIT2O94813 1529 aa13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 HEXIM1O94992 359 aaKnown RBP13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 VAV1P15498 845 aa13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 ZNF844Q08AG5 666 aa13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 GRM4Q14833 912 aa13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 TMEM259Q4ZIN3 620 aa13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 AGBL2Q5U5Z8 902 aa13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 KRT25Q7Z3Z0 450 aa13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 NEK8Q86SG6 692 aa13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 RSPH3Q86UC2 560 aa13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 MAPKAPK5Q8IW41 473 aa13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 ENDOVQ8N8Q3 282 aaKnown RBP13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 FAM133AQ8N9E0 248 aa13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 LRRC15Q8TF66 581 aa13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 AK8Q96MA6 479 aa13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 TTYH3Q9C0H2 523 aa13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 NLRC4Q9NPP4 1024 aa13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 TBCCD1Q9NVR7 557 aa13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 EURLQ9NYK6 297 aa13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 MAD2L2Q9UI95 211 aa13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 FADS3Q9Y5Q0 445 aa13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 UNCXA6NJT0 531 aa13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 DCDC2CA8MYV0 355 aa13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 NCK2O43639 380 aa13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 TBC1D12O60347 775 aa13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 LDHBP07195 334 aaKnown RBP13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 GNA11P29992 359 aa13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 HSPA9P38646 679 aaKnown RBP13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 KRT27Q7Z3Y8 459 aa13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 CENPTQ96BT3 561 aa13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 DDX50Q9BQ39 737 aaKnown RBP13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 TMEM47Q9BQJ4 181 aa13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 NDEL1Q9GZM8 345 aa13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 CCDC68Q9H2F9 335 aa13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 FAM32AQ9Y421 112 aaKnown RBP13.1□□□□□ -0.31
SMARCA4-217ENST00000591595 ZNF335Q9H4Z2 1342 aaPredicted RBP13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 ZNF263O14978 683 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 S100A1P23297 94 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 CTNNA1P35221 906 aaKnown RBP13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 RTP1P59025 263 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 ARID5AQ03989 594 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 KPNB1Q14974 876 aaKnown RBP13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 SEPT7Q16181 437 aaKnown RBP13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 VWA3BQ502W6 1294 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 SBK1Q52WX2 424 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms