RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 CHMP5Q9NZZ3 219 aa7.15□□□□□ -1.26
VPS4B-205ENST00000591383 LRWD1Q9UFC0 647 aa7.15□□□□□ -1.26
VPS4B-205ENST00000591383 FOXD3Q9UJU5 478 aaPredicted RBP7.15□□□□□ -1.26
VPS4B-205ENST00000591383 MROH7Q68CQ1 1323 aa7.15□□□□□ -1.26
VPS4B-205ENST00000591383 KDM3AQ9Y4C1 1321 aa7.15□□□□□ -1.26
VPS4B-205ENST00000591383 C17orf102A2RUQ5 167 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 ARVCFO00192 962 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 SPTLC2O15270 562 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 GRIN2DO15399 1336 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 ZNF862O60290 1169 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 B4GALT4O60513 344 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 SIP14410 1827 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 QARSP47897 775 aaKnown RBP7.14□□□□□ -1.27
VPS4B-205ENST00000591383 NASPP49321 788 aaPredicted RBP7.14□□□□□ -1.27
VPS4B-205ENST00000591383 IDH3AP50213 366 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 SLC26A2P50443 739 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 PSMC5P62195 406 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 RACK1P63244 317 aaKnown RBP7.14□□□□□ -1.27
VPS4B-205ENST00000591383 TLE2Q04725 743 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 GRIN1Q05586 938 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 PLCB4Q15147 1175 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 PTPAQ15257 358 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 EPHA7Q15375 998 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 MTERF2Q49AM1 385 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 ZNF394Q53GI3 561 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 SPECC1Q5M775 1068 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 KRT79Q5XKE5 535 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 ARL6IP4Q66PJ3 421 aaKnown RBP7.14□□□□□ -1.27
VPS4B-205ENST00000591383 GDF6Q6KF10 455 aaPredicted RBP7.14□□□□□ -1.27
VPS4B-205ENST00000591383 NFRKBQ6P4R8 1299 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 B3GNT9Q6UX72 402 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 SLC39A5Q6ZMH5 540 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 DPH6Q7L8W6 267 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 UBE2Q1Q7Z7E8 422 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 CABP7Q86V35 215 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 MEIOBQ8N635 442 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 C4orf32Q8N8J7 132 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 KCNG4Q8TDN1 519 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 EPS8L3Q8TE67 593 aaKnown RBP7.14□□□□□ -1.27
VPS4B-205ENST00000591383 AFAP1L1Q8TED9 768 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 ATP8B4Q8TF62 1192 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 LMBR1Q8WVP7 490 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 DPF3Q92784 378 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 ZBTB10Q96DT7 871 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 HSH2DQ96JZ2 352 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 SPATA32Q96LK8 384 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 CLIC6Q96NY7 704 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 FAM49AQ9H0Q0 323 aaPredicted RBP7.14□□□□□ -1.27
VPS4B-205ENST00000591383 TRPV6Q9H1D0 765 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 C12orf49Q9H741 205 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 TRMT13Q9NUP7 481 aaKnown RBP7.14□□□□□ -1.27
VPS4B-205ENST00000591383 HDAC6Q9UBN7 1215 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 GTF2IRD1Q9UHL9 959 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 TUBE1Q9UJT0 475 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 FBXO2Q9UK22 296 aaPredicted RBP7.14□□□□□ -1.27
VPS4B-205ENST00000591383 USP20Q9Y2K6 914 aa7.14□□□□□ -1.27
VPS4B-205ENST00000591383 GPC6Q9Y625 555 aaPredicted RBP7.14□□□□□ -1.27
VPS4B-205ENST00000591383 COL1A2P08123 1366 aa7.13□□□□□ -1.27
VPS4B-205ENST00000591383 IGKV6D-21A0A0A0MT36 114 aa7.13□□□□□ -1.27
VPS4B-205ENST00000591383 DCDC2CA8MYV0 355 aa7.13□□□□□ -1.27
VPS4B-205ENST00000591383 HAS3O00219 553 aa7.13□□□□□ -1.27
VPS4B-205ENST00000591383 GIPC1O14908 333 aa7.13□□□□□ -1.27
VPS4B-205ENST00000591383 USO1O60763 962 aaKnown RBP7.13□□□□□ -1.27
VPS4B-205ENST00000591383 DKC1O60832 514 aaKnown RBP eCLIP7.13□□□□□ -1.27
VPS4B-205ENST00000591383 MED24O75448 989 aa7.13□□□□□ -1.27
VPS4B-205ENST00000591383 SSBP05455 408 aaKnown RBP eCLIP7.13□□□□□ -1.27
VPS4B-205ENST00000591383 CLTBP09497 229 aa7.13□□□□□ -1.27
VPS4B-205ENST00000591383 CYP2C9P11712 490 aa7.13□□□□□ -1.27
VPS4B-205ENST00000591383 INSRRP14616 1297 aa7.13□□□□□ -1.27
VPS4B-205ENST00000591383 CDC25AP30304 524 aa7.13□□□□□ -1.27
VPS4B-205ENST00000591383 IRS1P35568 1242 aa7.13□□□□□ -1.27
VPS4B-205ENST00000591383 LONP1P36776 959 aaKnown RBP7.13□□□□□ -1.27
VPS4B-205ENST00000591383 UBA7P41226 1012 aa7.13□□□□□ -1.27
VPS4B-205ENST00000591383 PHKA2P46019 1235 aa7.13□□□□□ -1.27
VPS4B-205ENST00000591383 ZNF200P98182 395 aaPredicted RBP7.13□□□□□ -1.27
VPS4B-205ENST00000591383 SNX17Q15036 470 aa7.13□□□□□ -1.27
VPS4B-205ENST00000591383 IL17AQ16552 155 aa7.13□□□□□ -1.27
VPS4B-205ENST00000591383 PTGISQ16647 500 aa7.13□□□□□ -1.27
VPS4B-205ENST00000591383 XKR9Q5GH70 373 aa7.13□□□□□ -1.27
VPS4B-205ENST00000591383 PLPPR4Q7Z2D5 763 aa7.13□□□□□ -1.27
VPS4B-205ENST00000591383 FAM126BQ8IXS8 530 aa7.13□□□□□ -1.27
VPS4B-205ENST00000591383 IGSF22Q8N9C0 903 aa7.13□□□□□ -1.27
VPS4B-205ENST00000591383 LINC00301Q8NCQ3 95 aa7.13□□□□□ -1.27
VPS4B-205ENST00000591383 LEO1Q8WVC0 666 aaPredicted RBP7.13□□□□□ -1.27
VPS4B-205ENST00000591383 DHX38Q92620 1227 aaKnown RBP7.13□□□□□ -1.27
VPS4B-205ENST00000591383 PPP1R16BQ96T49 567 aa7.13□□□□□ -1.27
VPS4B-205ENST00000591383 INSM2Q96T92 566 aaPredicted RBP7.13□□□□□ -1.27
VPS4B-205ENST00000591383 PLIN2Q99541 437 aa7.13□□□□□ -1.27
VPS4B-205ENST00000591383 SH2D3AQ9BRG2 576 aa7.13□□□□□ -1.27
VPS4B-205ENST00000591383 CSRNP2Q9H175 543 aa7.13□□□□□ -1.27
VPS4B-205ENST00000591383 RNPEPQ9H4A4 650 aa7.13□□□□□ -1.27
VPS4B-205ENST00000591383 ZSWIM4Q9H7M6 989 aa7.13□□□□□ -1.27
VPS4B-205ENST00000591383 TUFT1Q9NNX1 390 aa7.13□□□□□ -1.27
VPS4B-205ENST00000591383 PDLIM7Q9NR12 457 aa7.13□□□□□ -1.27
VPS4B-205ENST00000591383 DDX19AQ9NUU7 478 aaKnown RBP7.13□□□□□ -1.27
VPS4B-205ENST00000591383 SETD4Q9NVD3 440 aa7.13□□□□□ -1.27
VPS4B-205ENST00000591383 WRAP73Q9P2S5 460 aaPredicted RBP7.13□□□□□ -1.27
VPS4B-205ENST00000591383 CFAP45Q9UL16 551 aa7.13□□□□□ -1.27
VPS4B-205ENST00000591383 ZMYND8Q9ULU4 1186 aaPredicted RBP7.13□□□□□ -1.27
VPS4B-205ENST00000591383 PCDHGB7Q9Y5F8 929 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms