RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 POMCP01189 267 aa12.25□□□□□ -0.45
SEH1L-208ENST00000590843 TUBB4AP04350 444 aa12.25□□□□□ -0.45
SEH1L-208ENST00000590843 MBL2P11226 248 aaPredicted RBP12.25□□□□□ -0.45
SEH1L-208ENST00000590843 CPA1P15085 419 aa12.25□□□□□ -0.45
SEH1L-208ENST00000590843 PTGS1P23219 599 aa12.25□□□□□ -0.45
SEH1L-208ENST00000590843 HERC6Q8IVU3 1022 aa12.25□□□□□ -0.45
SEH1L-208ENST00000590843 CLSTN2Q9H4D0 955 aa12.25□□□□□ -0.45
SEH1L-208ENST00000590843 MYO1AQ9UBC5 1043 aa12.25□□□□□ -0.45
SEH1L-208ENST00000590843 MRPS23Q9Y3D9 190 aaKnown RBP12.25□□□□□ -0.45
SEH1L-208ENST00000590843 SCINQ9Y6U3 715 aa12.25□□□□□ -0.45
SEH1L-208ENST00000590843 DDTLA6NHG4 134 aaPredicted RBP12.25□□□□□ -0.45
SEH1L-208ENST00000590843 MYO1FO00160 1098 aa12.25□□□□□ -0.45
SEH1L-208ENST00000590843 ACTN4O43707 911 aaKnown RBP12.25□□□□□ -0.45
SEH1L-208ENST00000590843 SLC10A3P09131 477 aa12.25□□□□□ -0.45
SEH1L-208ENST00000590843 CFAP157Q5JU67 520 aa12.25□□□□□ -0.45
SEH1L-208ENST00000590843 PCNX4Q63HM2 1172 aa12.25□□□□□ -0.45
SEH1L-208ENST00000590843 ERICH1Q86X53 443 aa12.25□□□□□ -0.45
SEH1L-208ENST00000590843 SPON2Q9BUD6 331 aa12.25□□□□□ -0.45
SEH1L-208ENST00000590843 SRRTQ9BXP5 876 aaKnown RBP12.25□□□□□ -0.45
SEH1L-208ENST00000590843 SP110Q9HB58 689 aa12.25□□□□□ -0.45
SEH1L-208ENST00000590843 SPG21Q9NZD8 308 aa12.25□□□□□ -0.45
SEH1L-208ENST00000590843 SLC25A13Q9UJS0 675 aa12.25□□□□□ -0.45
SEH1L-208ENST00000590843 ANGPTL3Q9Y5C1 460 aa12.25□□□□□ -0.45
SEH1L-208ENST00000590843 DNAJB2P25686 324 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 KLRC1P26715 233 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 ETFBP38117 255 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 PTH1RQ03431 593 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 GRK7Q8WTQ7 553 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 USP13Q92995 863 aaPredicted RBP12.24□□□□□ -0.45
SEH1L-208ENST00000590843 CYP4F11Q9HBI6 524 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 ABCC6O95255 1503 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 PGK1P00558 417 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 ACADSBP45954 432 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 SGO2Q562F6 1265 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 AFAP1L1Q8TED9 768 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 IFT43Q96FT9 208 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 MED15Q96RN5 788 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 GMEB2Q9UKD1 530 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.24□□□□□ -0.45
SEH1L-208ENST00000590843 FOSL2P15408 326 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 DDX5P17844 614 aaKnown RBP12.24□□□□□ -0.45
SEH1L-208ENST00000590843 TUBB4BP68371 445 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 ARHGEF7Q14155 803 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 PXMP2Q9NR77 195 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 MAPK8IP1Q9UQF2 711 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 ZNF202O95125 648 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 PLEKHA8P1O95397 391 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 GSE1Q14687 1217 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 PPP2R5EQ16537 467 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 PIGOQ8TEQ8 1089 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 SLC39A2Q9NP94 309 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 TMEM260Q9NX78 707 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 NFKBIEO00221 500 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 LMNB2Q03252 620 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 LONRF3Q496Y0 759 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 EFHC2Q5JST6 749 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 RASAL3Q86YV0 1011 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 TRIM48Q8IWZ4 208 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 AOPEPQ8N6M6 819 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 FAM213AQ9BRX8 229 aa12.24□□□□□ -0.45
SEH1L-208ENST00000590843 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.23□□□□□ -0.45
SEH1L-208ENST00000590843 PPP6R2O75170 966 aa12.23□□□□□ -0.45
SEH1L-208ENST00000590843 IVLP07476 585 aa12.23□□□□□ -0.45
SEH1L-208ENST00000590843 PTPN14Q15678 1187 aa12.23□□□□□ -0.45
SEH1L-208ENST00000590843 CCNYQ8ND76 341 aa12.23□□□□□ -0.45
SEH1L-208ENST00000590843 TRIM56Q9BRZ2 755 aaKnown RBP12.23□□□□□ -0.45
SEH1L-208ENST00000590843 OXCT2Q9BYC2 517 aaPredicted RBP12.23□□□□□ -0.45
SEH1L-208ENST00000590843 DCLK3Q9C098 648 aa12.23□□□□□ -0.45
SEH1L-208ENST00000590843 RSAD1Q9HA92 442 aa12.23□□□□□ -0.45
SEH1L-208ENST00000590843 PPANQ9NQ55 473 aaKnown RBP12.23□□□□□ -0.45
SEH1L-208ENST00000590843 LUC7L3O95232 432 aaKnown RBP12.23□□□□□ -0.45
SEH1L-208ENST00000590843 ASMTLO95671 621 aa12.23□□□□□ -0.45
SEH1L-208ENST00000590843 VCLP18206 1134 aa12.23□□□□□ -0.45
SEH1L-208ENST00000590843 GARTP22102 1010 aa12.23□□□□□ -0.45
SEH1L-208ENST00000590843 APOBEC3HQ6NTF7 200 aaKnown RBP12.23□□□□□ -0.45
SEH1L-208ENST00000590843 ZFP91Q96JP5 570 aaPredicted RBP12.23□□□□□ -0.45
SEH1L-208ENST00000590843 AGAP1Q9UPQ3 857 aa12.23□□□□□ -0.45
SEH1L-208ENST00000590843 LHX1P48742 406 aa12.23□□□□□ -0.45
SEH1L-208ENST00000590843 MRPS6P82932 125 aaKnown RBP12.23□□□□□ -0.45
SEH1L-208ENST00000590843 PRKCZQ05513 592 aa12.23□□□□□ -0.45
SEH1L-208ENST00000590843 DPYDQ12882 1025 aa12.23□□□□□ -0.45
SEH1L-208ENST00000590843 SEMA3FQ13275 785 aa12.23□□□□□ -0.45
SEH1L-208ENST00000590843 ERCC6LQ2NKX8 1250 aa12.23□□□□□ -0.45
SEH1L-208ENST00000590843 CCDC144BQ3MJ40 725 aa12.23□□□□□ -0.45
SEH1L-208ENST00000590843 NOL9Q5SY16 702 aaKnown RBP12.23□□□□□ -0.45
SEH1L-208ENST00000590843 CYP26C1Q6V0L0 522 aa12.23□□□□□ -0.45
SEH1L-208ENST00000590843 ANKLE1Q8NAG6 615 aa12.23□□□□□ -0.45
SEH1L-208ENST00000590843 ARNTL2Q8WYA1 636 aa12.23□□□□□ -0.45
SEH1L-208ENST00000590843 BLZF1Q9H2G9 400 aa12.23□□□□□ -0.45
SEH1L-208ENST00000590843 FBXO28Q9NVF7 368 aa12.23□□□□□ -0.45
SEH1L-208ENST00000590843 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.23□□□□□ -0.45
SEH1L-208ENST00000590843 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.23□□□□□ -0.45
SEH1L-208ENST00000590843 GLUD1P00367 558 aa12.23□□□□□ -0.45
SEH1L-208ENST00000590843 U2AF1L4Q8WU68 220 aaKnown RBP12.23□□□□□ -0.45
SEH1L-208ENST00000590843 ZNF296Q8WUU4 475 aaPredicted RBP12.23□□□□□ -0.45
SEH1L-208ENST00000590843 UBXN4Q92575 508 aa12.23□□□□□ -0.45
SEH1L-208ENST00000590843 GSDMAQ96QA5 445 aa12.23□□□□□ -0.45
SEH1L-208ENST00000590843 SERTAD1Q9UHV2 236 aa12.23□□□□□ -0.45
SEH1L-208ENST00000590843 KPNA2P52292 529 aaKnown RBP12.22□□□□□ -0.45
SEH1L-208ENST00000590843 ZNF235Q14590 738 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms