RNA–Protein interactions for RNA: ENST00000589541.5

MBD1-218, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-218ENST00000589541 CARNS1A5YM72 827 aa13.18□□□□□ -0.3
MBD1-218ENST00000589541 C2CD4DB7Z1M9 353 aa13.18□□□□□ -0.3
MBD1-218ENST00000589541 CTDNEP1O95476 244 aa13.18□□□□□ -0.3
MBD1-218ENST00000589541 SSBP05455 408 aaKnown RBP eCLIP13.18□□□□□ -0.3
MBD1-218ENST00000589541 HOXA11P31270 313 aaPredicted RBP13.18□□□□□ -0.3
MBD1-218ENST00000589541 MTHFRP42898 656 aa13.18□□□□□ -0.3
MBD1-218ENST00000589541 VCPP55072 806 aaKnown RBP13.18□□□□□ -0.3
MBD1-218ENST00000589541 NR5A1Q13285 461 aa13.18□□□□□ -0.3
MBD1-218ENST00000589541 GIT2Q14161 759 aa13.18□□□□□ -0.3
MBD1-218ENST00000589541 XKR9Q5GH70 373 aa13.18□□□□□ -0.3
MBD1-218ENST00000589541 OTUD6AQ7L8S5 288 aa13.18□□□□□ -0.3
MBD1-218ENST00000589541 SRGAP1Q7Z6B7 1085 aa13.18□□□□□ -0.3
MBD1-218ENST00000589541 TPH2Q8IWU9 490 aa13.18□□□□□ -0.3
MBD1-218ENST00000589541 C4orf19Q8IY42 314 aa13.18□□□□□ -0.3
MBD1-218ENST00000589541 RNF149Q8NC42 400 aa13.18□□□□□ -0.3
MBD1-218ENST00000589541 DYDC2Q96IM9 177 aa13.18□□□□□ -0.3
MBD1-218ENST00000589541 RIPOR3Q96MK2 946 aa13.18□□□□□ -0.3
MBD1-218ENST00000589541 PHOX2BQ99453 314 aa13.18□□□□□ -0.3
MBD1-218ENST00000589541 ZSWIM4Q9H7M6 989 aa13.18□□□□□ -0.3
MBD1-218ENST00000589541 RSAD1Q9HA92 442 aa13.18□□□□□ -0.3
MBD1-218ENST00000589541 DZANK1Q9NVP4 752 aa13.18□□□□□ -0.3
MBD1-218ENST00000589541 PPME1Q9Y570 386 aa13.18□□□□□ -0.3
MBD1-218ENST00000589541 IRAK3Q9Y616 596 aa13.18□□□□□ -0.3
MBD1-218ENST00000589541 GAS2O43903 313 aaKnown RBP13.17□□□□□ -0.3
MBD1-218ENST00000589541 DDHD2O94830 711 aa13.17□□□□□ -0.3
MBD1-218ENST00000589541 BAG4O95429 457 aaKnown RBP13.17□□□□□ -0.3
MBD1-218ENST00000589541 PDGFBP01127 241 aaPredicted RBP13.17□□□□□ -0.3
MBD1-218ENST00000589541 POMCP01189 267 aa13.17□□□□□ -0.3
MBD1-218ENST00000589541 PTPN5P54829 565 aa13.17□□□□□ -0.3
MBD1-218ENST00000589541 SPIRE1Q08AE8 756 aa13.17□□□□□ -0.3
MBD1-218ENST00000589541 MTMR3Q13615 1198 aa13.17□□□□□ -0.3
MBD1-218ENST00000589541 PTPN14Q15678 1187 aa13.17□□□□□ -0.3
MBD1-218ENST00000589541 ATAT1Q5SQI0 421 aa13.17□□□□□ -0.3
MBD1-218ENST00000589541 UBXN11Q5T124 520 aa13.17□□□□□ -0.3
MBD1-218ENST00000589541 TMC5Q6UXY8 1006 aa13.17□□□□□ -0.3
MBD1-218ENST00000589541 MRPL10Q7Z7H8 261 aaKnown RBP13.17□□□□□ -0.3
MBD1-218ENST00000589541 FERMT3Q86UX7 667 aa13.17□□□□□ -0.3
MBD1-218ENST00000589541 CABP7Q86V35 215 aa13.17□□□□□ -0.3
MBD1-218ENST00000589541 SLFN12Q8IYM2 578 aa13.17□□□□□ -0.3
MBD1-218ENST00000589541 NECAB1Q8N987 351 aa13.17□□□□□ -0.3
MBD1-218ENST00000589541 SLC22A17Q8WUG5 538 aa13.17□□□□□ -0.3
MBD1-218ENST00000589541 TCP11Q8WWU5 503 aa13.17□□□□□ -0.3
MBD1-218ENST00000589541 WASF1Q92558 559 aa13.17□□□□□ -0.3
MBD1-218ENST00000589541 FAM193BQ96PV7 902 aaPredicted RBP13.17□□□□□ -0.3
MBD1-218ENST00000589541 DBR1Q9UK59 544 aaKnown RBP13.17□□□□□ -0.3
MBD1-218ENST00000589541 CNTNAP2Q9UHC6 1331 aa13.16□□□□□ -0.3
MBD1-218ENST00000589541 SPDYE4A6NLX3 237 aa13.16□□□□□ -0.3
MBD1-218ENST00000589541 ASAP2O43150 1006 aa13.16□□□□□ -0.3
MBD1-218ENST00000589541 ERLIN2O94905 339 aa13.16□□□□□ -0.3
MBD1-218ENST00000589541 SLITRK3O94933 977 aa13.16□□□□□ -0.3
MBD1-218ENST00000589541 BRD1O95696 1058 aa13.16□□□□□ -0.3
MBD1-218ENST00000589541 ALDH2P05091 517 aa13.16□□□□□ -0.3
MBD1-218ENST00000589541 ASGR2P07307 311 aa13.16□□□□□ -0.3
MBD1-218ENST00000589541 FDPSP14324 419 aaKnown RBP13.16□□□□□ -0.3
MBD1-218ENST00000589541 KRT2P35908 639 aa13.16□□□□□ -0.3
MBD1-218ENST00000589541 AK2P54819 239 aa13.16□□□□□ -0.3
MBD1-218ENST00000589541 TCF15Q12870 199 aa13.16□□□□□ -0.3
MBD1-218ENST00000589541 KIAA1841Q6NSI8 718 aa13.16□□□□□ -0.3
MBD1-218ENST00000589541 TDRD5Q8NAT2 981 aaKnown RBP13.16□□□□□ -0.3
MBD1-218ENST00000589541 FEZF2Q8TBJ5 459 aa13.16□□□□□ -0.3
MBD1-218ENST00000589541 MTRQ99707 1265 aa13.16□□□□□ -0.3
MBD1-218ENST00000589541 PRRX2Q99811 253 aa13.16□□□□□ -0.3
MBD1-218ENST00000589541 SMOC2Q9H3U7 446 aa13.16□□□□□ -0.3
MBD1-218ENST00000589541 BRMS1Q9HCU9 246 aa13.16□□□□□ -0.3
MBD1-218ENST00000589541 KANSL3Q9P2N6 904 aa13.16□□□□□ -0.3
MBD1-218ENST00000589541 SORCS3Q9UPU3 1222 aa13.16□□□□□ -0.3
MBD1-218ENST00000589541 FAN1Q9Y2M0 1017 aa13.16□□□□□ -0.3
MBD1-218ENST00000589541 C2CD2LO14523 706 aa13.15□□□□□ -0.3
MBD1-218ENST00000589541 NRP1O14786 923 aa13.15□□□□□ -0.3
MBD1-218ENST00000589541 TSPAN1O60635 241 aa13.15□□□□□ -0.3
MBD1-218ENST00000589541 CNPP09543 421 aaKnown RBP13.15□□□□□ -0.3
MBD1-218ENST00000589541 ITGA4P13612 1032 aa13.15□□□□□ -0.3
MBD1-218ENST00000589541 NCLP19338 710 aaKnown RBP13.15□□□□□ -0.3
MBD1-218ENST00000589541 KLRC2P26717 231 aa13.15□□□□□ -0.3
MBD1-218ENST00000589541 AVPR2P30518 371 aa13.15□□□□□ -0.3
MBD1-218ENST00000589541 MXD4Q14582 209 aaPredicted RBP13.15□□□□□ -0.3
MBD1-218ENST00000589541 ANKRD1Q15327 319 aa13.15□□□□□ -0.3
MBD1-218ENST00000589541 CALCRLQ16602 461 aa13.15□□□□□ -0.3
MBD1-218ENST00000589541 PPFIBP1Q86W92 1011 aa13.15□□□□□ -0.3
MBD1-218ENST00000589541 UBALD2Q8IYN6 164 aa13.15□□□□□ -0.3
MBD1-218ENST00000589541 SMG8Q8ND04 991 aaKnown RBP13.15□□□□□ -0.3
MBD1-218ENST00000589541 TNFRSF25Q93038 417 aa13.15□□□□□ -0.3
MBD1-218ENST00000589541 CPB2Q96IY4 423 aa13.15□□□□□ -0.3
MBD1-218ENST00000589541 KLHL5Q96PQ7 755 aa13.15□□□□□ -0.3
MBD1-218ENST00000589541 EIF2AK1Q9BQI3 630 aaKnown RBP13.15□□□□□ -0.3
MBD1-218ENST00000589541 TMEM175Q9BSA9 504 aa13.15□□□□□ -0.3
MBD1-218ENST00000589541 EMILIN2Q9BXX0 1053 aa13.15□□□□□ -0.3
MBD1-218ENST00000589541 EIF2AQ9BY44 585 aaKnown RBP13.15□□□□□ -0.3
MBD1-218ENST00000589541 XPNPEP1Q9NQW7 623 aa13.15□□□□□ -0.3
MBD1-218ENST00000589541 MRPL17Q9NRX2 175 aaKnown RBP13.15□□□□□ -0.3
MBD1-218ENST00000589541 STK39Q9UEW8 545 aa13.15□□□□□ -0.3
MBD1-218ENST00000589541 LIMD1Q9UGP4 676 aa13.15□□□□□ -0.3
MBD1-218ENST00000589541 PCDHA12Q9UN75 941 aa13.15□□□□□ -0.3
MBD1-218ENST00000589541 PRG3Q9Y2Y8 225 aaPredicted RBP13.15□□□□□ -0.3
MBD1-218ENST00000589541 HES2Q9Y543 173 aa13.15□□□□□ -0.3
MBD1-218ENST00000589541 IPPQ9Y573 584 aa13.15□□□□□ -0.3
MBD1-218ENST00000589541 ARL5CA6NH57 179 aa13.14□□□□□ -0.31
MBD1-218ENST00000589541 INO80B-WBP1J3KQ70 363 aa13.14□□□□□ -0.31
MBD1-218ENST00000589541 LARGE1O95461 756 aa13.14□□□□□ -0.31
MBD1-218ENST00000589541 MLH1P40692 756 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms