RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 AGPAT5Q9NUQ2 364 aa17.07■□□□□ 0.32
ACTN4-211ENST00000589528 MTCL1Q9Y4B5 1905 aaKnown RBP17.07■□□□□ 0.32
ACTN4-211ENST00000589528 DOCK8Q8NF50 2099 aa17.06■□□□□ 0.32
ACTN4-211ENST00000589528 GVINP1Q7Z2Y8 2422 aa17.06■□□□□ 0.32
ACTN4-211ENST00000589528 CCDC195A0A1B0GUA6 201 aa17.06■□□□□ 0.32
ACTN4-211ENST00000589528 NRP1O14786 923 aa17.06■□□□□ 0.32
ACTN4-211ENST00000589528 NARSO43776 548 aaKnown RBP17.06■□□□□ 0.32
ACTN4-211ENST00000589528 DDHD2O94830 711 aa17.06■□□□□ 0.32
ACTN4-211ENST00000589528 GLUD1P00367 558 aa17.06■□□□□ 0.32
ACTN4-211ENST00000589528 POMCP01189 267 aa17.06■□□□□ 0.32
ACTN4-211ENST00000589528 SOD2P04179 222 aa17.06■□□□□ 0.32
ACTN4-211ENST00000589528 PSMC5P62195 406 aa17.06■□□□□ 0.32
ACTN4-211ENST00000589528 Q4G0T1 1027 aa17.06■□□□□ 0.32
ACTN4-211ENST00000589528 BMP2KLQ5H9B9 411 aa17.06■□□□□ 0.32
ACTN4-211ENST00000589528 PLA2G4FQ68DD2 849 aa17.06■□□□□ 0.32
ACTN4-211ENST00000589528 BLOC1S2Q6QNY1 142 aa17.06■□□□□ 0.32
ACTN4-211ENST00000589528 AGMOQ6ZNB7 445 aa17.06■□□□□ 0.32
ACTN4-211ENST00000589528 JAKMIP1Q96N16 626 aaKnown RBP17.06■□□□□ 0.32
ACTN4-211ENST00000589528 HINFPQ9BQA5 517 aa17.06■□□□□ 0.32
ACTN4-211ENST00000589528 COL4A3BPQ9Y5P4 624 aa17.06■□□□□ 0.32
ACTN4-211ENST00000589528 NID2Q14112 1375 aa17.05■□□□□ 0.32
ACTN4-211ENST00000589528 CLUHO75153 1309 aa17.05■□□□□ 0.32
ACTN4-211ENST00000589528 INPPL1O15357 1258 aa17.05■□□□□ 0.32
ACTN4-211ENST00000589528 B4GALT3O60512 393 aa17.05■□□□□ 0.32
ACTN4-211ENST00000589528 LMNAP02545 664 aaKnown RBP17.05■□□□□ 0.32
ACTN4-211ENST00000589528 OR1G1P47890 313 aa17.05■□□□□ 0.32
ACTN4-211ENST00000589528 SRGAP1Q7Z6B7 1085 aa17.05■□□□□ 0.32
ACTN4-211ENST00000589528 EXOC8Q8IYI6 725 aa17.05■□□□□ 0.32
ACTN4-211ENST00000589528 TRIM22Q8IYM9 498 aa17.05■□□□□ 0.32
ACTN4-211ENST00000589528 RSAD2Q8WXG1 361 aa17.05■□□□□ 0.32
ACTN4-211ENST00000589528 SMG7Q92540 1137 aaKnown RBP17.05■□□□□ 0.32
ACTN4-211ENST00000589528 CEP89Q96ST8 783 aa17.05■□□□□ 0.32
ACTN4-211ENST00000589528 SLKQ9H2G2 1235 aaPredicted RBP17.05■□□□□ 0.32
ACTN4-211ENST00000589528 SEMA4AQ9H3S1 761 aa17.05■□□□□ 0.32
ACTN4-211ENST00000589528 PIDD1Q9HB75 910 aa17.05■□□□□ 0.32
ACTN4-211ENST00000589528 IFT122Q9HBG6 1241 aa17.05■□□□□ 0.32
ACTN4-211ENST00000589528 SH3GLB2Q9NR46 395 aa17.05■□□□□ 0.32
ACTN4-211ENST00000589528 WNT16Q9UBV4 365 aa17.05■□□□□ 0.32
ACTN4-211ENST00000589528 CA14Q9ULX7 337 aa17.05■□□□□ 0.32
ACTN4-211ENST00000589528 PRG3Q9Y2Y8 225 aaPredicted RBP17.05■□□□□ 0.32
ACTN4-211ENST00000589528 EP300Q09472 2414 aaPredicted RBP17.04■□□□□ 0.32
ACTN4-211ENST00000589528 DKC1O60832 514 aaKnown RBP eCLIP17.04■□□□□ 0.32
ACTN4-211ENST00000589528 NR1I2O75469 434 aa17.04■□□□□ 0.32
ACTN4-211ENST00000589528 ERLIN2O94905 339 aa17.04■□□□□ 0.32
ACTN4-211ENST00000589528 TDP2O95551 362 aa17.04■□□□□ 0.32
ACTN4-211ENST00000589528 SRGAP2CP0DJJ0 459 aa17.04■□□□□ 0.32
ACTN4-211ENST00000589528 MYBP10242 640 aa17.04■□□□□ 0.32
ACTN4-211ENST00000589528 GLUD2P49448 558 aa17.04■□□□□ 0.32
ACTN4-211ENST00000589528 CCT2P78371 535 aaKnown RBP17.04■□□□□ 0.32
ACTN4-211ENST00000589528 CYP26C1Q6V0L0 522 aa17.04■□□□□ 0.32
ACTN4-211ENST00000589528 ANO5Q75V66 913 aa17.04■□□□□ 0.32
ACTN4-211ENST00000589528 CMASQ8NFW8 434 aaPredicted RBP17.04■□□□□ 0.32
ACTN4-211ENST00000589528 PSPC1Q8WXF1 523 aaKnown RBP17.04■□□□□ 0.32
ACTN4-211ENST00000589528 CEP170P1Q96L14 293 aa17.04■□□□□ 0.32
ACTN4-211ENST00000589528 RPS6KC1Q96S38 1066 aa17.04■□□□□ 0.32
ACTN4-211ENST00000589528 HERC2P3Q9BVR0 1158 aa17.04■□□□□ 0.32
ACTN4-211ENST00000589528 WDR6Q9NNW5 1121 aaKnown RBP17.04■□□□□ 0.32
ACTN4-211ENST00000589528 UBN1Q9NPG3 1134 aa17.04■□□□□ 0.32
ACTN4-211ENST00000589528 TEX28O15482 410 aa17.03■□□□□ 0.32
ACTN4-211ENST00000589528 CDC45O75419 566 aa17.03■□□□□ 0.32
ACTN4-211ENST00000589528 STBD1O95210 358 aa17.03■□□□□ 0.32
ACTN4-211ENST00000589528 ITGA4P13612 1032 aa17.03■□□□□ 0.32
ACTN4-211ENST00000589528 IFNAR1P17181 557 aa17.03■□□□□ 0.32
ACTN4-211ENST00000589528 AFF1P51825 1210 aaKnown RBP17.03■□□□□ 0.32
ACTN4-211ENST00000589528 SPECC1Q5M775 1068 aa17.03■□□□□ 0.32
ACTN4-211ENST00000589528 ZC3H14Q6PJT7 736 aaKnown RBP17.03■□□□□ 0.32
ACTN4-211ENST00000589528 MRPL10Q7Z7H8 261 aaKnown RBP17.03■□□□□ 0.32
ACTN4-211ENST00000589528 CNNM3Q8NE01 707 aa17.03■□□□□ 0.32
ACTN4-211ENST00000589528 RIN2Q8WYP3 895 aaPredicted RBP17.03■□□□□ 0.32
ACTN4-211ENST00000589528 NXPE3Q969Y0 559 aa17.03■□□□□ 0.32
ACTN4-211ENST00000589528 TBC1D17Q9HA65 648 aa17.03■□□□□ 0.32
ACTN4-211ENST00000589528 DDX25Q9UHL0 483 aaKnown RBP17.03■□□□□ 0.32
ACTN4-211ENST00000589528 PCDHA4Q9UN74 947 aa17.03■□□□□ 0.32
ACTN4-211ENST00000589528 MIA3Q5JRA6 1907 aa17.02■□□□□ 0.32
ACTN4-211ENST00000589528 KRBA1A5PL33 1030 aa17.02■□□□□ 0.32
ACTN4-211ENST00000589528 EDIL3O43854 480 aa17.02■□□□□ 0.32
ACTN4-211ENST00000589528 LILRB3O75022 631 aa17.02■□□□□ 0.32
ACTN4-211ENST00000589528 N4BP1O75113 896 aaKnown RBP17.02■□□□□ 0.32
ACTN4-211ENST00000589528 SRFP11831 508 aa17.02■□□□□ 0.32
ACTN4-211ENST00000589528 NCLP19338 710 aaKnown RBP17.02■□□□□ 0.32
ACTN4-211ENST00000589528 QARSP47897 775 aaKnown RBP17.02■□□□□ 0.32
ACTN4-211ENST00000589528 NPEPPSP55786 919 aa17.02■□□□□ 0.32
ACTN4-211ENST00000589528 SSRP1Q08945 709 aaKnown RBP17.02■□□□□ 0.32
ACTN4-211ENST00000589528 NCBP1Q09161 790 aaKnown RBP17.02■□□□□ 0.32
ACTN4-211ENST00000589528 NTRK3Q16288 839 aa17.02■□□□□ 0.32
ACTN4-211ENST00000589528 SLC44A3Q8N4M1 653 aa17.02■□□□□ 0.32
ACTN4-211ENST00000589528 ETNPPLQ8TBG4 499 aa17.02■□□□□ 0.32
ACTN4-211ENST00000589528 TMEM143Q96AN5 459 aa17.02■□□□□ 0.32
ACTN4-211ENST00000589528 NCOA5Q9HCD5 579 aaKnown RBP17.02■□□□□ 0.32
ACTN4-211ENST00000589528 BMP2KQ9NSY1 1161 aaPredicted RBP17.02■□□□□ 0.32
ACTN4-211ENST00000589528 EPS15L1Q9UBC2 864 aa17.02■□□□□ 0.32
ACTN4-211ENST00000589528 R4GN57 208 aa17.02■□□□□ 0.32
ACTN4-211ENST00000589528 CYP3A7-CYP3A51PA0A087WV96 503 aa17.01■□□□□ 0.31
ACTN4-211ENST00000589528 CPLX1O14810 134 aa17.01■□□□□ 0.31
ACTN4-211ENST00000589528 MARCH6O60337 910 aa17.01■□□□□ 0.31
ACTN4-211ENST00000589528 RFPL2O75678 378 aa17.01■□□□□ 0.31
ACTN4-211ENST00000589528 SPATA31D3P0C874 917 aa17.01■□□□□ 0.31
ACTN4-211ENST00000589528 CYP3A7P24462 503 aa17.01■□□□□ 0.31
ACTN4-211ENST00000589528 RFC5P40937 340 aa17.01■□□□□ 0.31
ACTN4-211ENST00000589528 LAMTOR4Q0VGL1 99 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms