RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 LRRC43Q8N309 656 aa12.83□□□□□ -0.36
RFX1-204ENST00000588885 ERMNQ8TAM6 284 aa12.83□□□□□ -0.36
RFX1-204ENST00000588885 CPB2Q96IY4 423 aa12.83□□□□□ -0.36
RFX1-204ENST00000588885 ZNF558Q96NG5 402 aa12.83□□□□□ -0.36
RFX1-204ENST00000588885 NACC1Q96RE7 527 aa12.83□□□□□ -0.36
RFX1-204ENST00000588885 POLR3CQ9BUI4 534 aaPredicted RBP12.83□□□□□ -0.36
RFX1-204ENST00000588885 GBP3Q9H0R5 595 aa12.83□□□□□ -0.36
RFX1-204ENST00000588885 TLE6Q9H808 572 aa12.83□□□□□ -0.36
RFX1-204ENST00000588885 TUFT1Q9NNX1 390 aa12.83□□□□□ -0.36
RFX1-204ENST00000588885 AGPAT5Q9NUQ2 364 aa12.83□□□□□ -0.36
RFX1-204ENST00000588885 LRWD1Q9UFC0 647 aa12.83□□□□□ -0.36
RFX1-204ENST00000588885 FAM50BQ9Y247 325 aa12.83□□□□□ -0.36
RFX1-204ENST00000588885 FNDC1Q4ZHG4 1894 aaPredicted RBP12.82□□□□□ -0.36
RFX1-204ENST00000588885 PP2D1A8MPX8 630 aa12.82□□□□□ -0.36
RFX1-204ENST00000588885 ERLIN2O94905 339 aa12.82□□□□□ -0.36
RFX1-204ENST00000588885 XRCC6P12956 609 aaKnown RBP eCLIP12.82□□□□□ -0.36
RFX1-204ENST00000588885 IL9P15248 144 aa12.82□□□□□ -0.36
RFX1-204ENST00000588885 PDCP20941 246 aa12.82□□□□□ -0.36
RFX1-204ENST00000588885 LTBRP36941 435 aa12.82□□□□□ -0.36
RFX1-204ENST00000588885 PTENP60484 403 aa12.82□□□□□ -0.36
RFX1-204ENST00000588885 ORC2Q13416 577 aaPredicted RBP12.82□□□□□ -0.36
RFX1-204ENST00000588885 CAPSQ13938 189 aa12.82□□□□□ -0.36
RFX1-204ENST00000588885 TFDP1Q14186 410 aa12.82□□□□□ -0.36
RFX1-204ENST00000588885 ECM1Q16610 540 aa12.82□□□□□ -0.36
RFX1-204ENST00000588885 UBXN11Q5T124 520 aa12.82□□□□□ -0.36
RFX1-204ENST00000588885 PLPP4Q5VZY2 271 aa12.82□□□□□ -0.36
RFX1-204ENST00000588885 PADI6Q6TGC4 694 aa12.82□□□□□ -0.36
RFX1-204ENST00000588885 GLB1LQ6UWU2 654 aa12.82□□□□□ -0.36
RFX1-204ENST00000588885 TLR9Q9NR96 1032 aa12.82□□□□□ -0.36
RFX1-204ENST00000588885 SPG21Q9NZD8 308 aa12.82□□□□□ -0.36
RFX1-204ENST00000588885 PLXNA4Q9HCM2 1894 aa12.82□□□□□ -0.36
RFX1-204ENST00000588885 C5orf42Q9H799 3197 aa12.81□□□□□ -0.36
RFX1-204ENST00000588885 ARHGEF35A5YM69 484 aa12.81□□□□□ -0.36
RFX1-204ENST00000588885 GRXCR2A6NFK2 248 aa12.81□□□□□ -0.36
RFX1-204ENST00000588885 LRRIQ4A6NIV6 560 aa12.81□□□□□ -0.36
RFX1-204ENST00000588885 B4GALT5O43286 388 aa12.81□□□□□ -0.36
RFX1-204ENST00000588885 NCK2O43639 380 aa12.81□□□□□ -0.36
RFX1-204ENST00000588885 TSPAN1O60635 241 aa12.81□□□□□ -0.36
RFX1-204ENST00000588885 ZC3H11AO75152 810 aaKnown RBP eCLIP12.81□□□□□ -0.36
RFX1-204ENST00000588885 OFD1O75665 1012 aa12.81□□□□□ -0.36
RFX1-204ENST00000588885 F13A1P00488 732 aa12.81□□□□□ -0.36
RFX1-204ENST00000588885 ZSCAN22P10073 491 aaPredicted RBP12.81□□□□□ -0.36
RFX1-204ENST00000588885 SKIP12755 728 aa12.81□□□□□ -0.36
RFX1-204ENST00000588885 LIG1P18858 919 aa12.81□□□□□ -0.36
RFX1-204ENST00000588885 RPA1P27694 616 aa12.81□□□□□ -0.36
RFX1-204ENST00000588885 CDC25AP30304 524 aa12.81□□□□□ -0.36
RFX1-204ENST00000588885 RAB27AP51159 221 aa12.81□□□□□ -0.36
RFX1-204ENST00000588885 AFF1P51825 1210 aaKnown RBP12.81□□□□□ -0.36
RFX1-204ENST00000588885 BCAR1P56945 870 aa12.81□□□□□ -0.36
RFX1-204ENST00000588885 RBM10P98175 930 aaKnown RBP12.81□□□□□ -0.36
RFX1-204ENST00000588885 KRT17Q04695 432 aa12.81□□□□□ -0.36
RFX1-204ENST00000588885 RNASELQ05823 741 aaKnown RBP12.81□□□□□ -0.36
RFX1-204ENST00000588885 RESTQ13127 1097 aa12.81□□□□□ -0.36
RFX1-204ENST00000588885 ADAM15Q13444 863 aa12.81□□□□□ -0.36
RFX1-204ENST00000588885 ZRSR1Q15695 479 aaKnown RBP12.81□□□□□ -0.36
RFX1-204ENST00000588885 IL17AQ16552 155 aa12.81□□□□□ -0.36
RFX1-204ENST00000588885 NOMO2Q5JPE7 1267 aa12.81□□□□□ -0.36
RFX1-204ENST00000588885 CDR2LQ86X02 465 aaPredicted RBP12.81□□□□□ -0.36
RFX1-204ENST00000588885 MRPS27Q92552 414 aaKnown RBP12.81□□□□□ -0.36
RFX1-204ENST00000588885 PPP2R3CQ969Q6 453 aa12.81□□□□□ -0.36
RFX1-204ENST00000588885 TRAIPQ9BWF2 469 aa12.81□□□□□ -0.36
RFX1-204ENST00000588885 APOL6Q9BWW8 343 aa12.81□□□□□ -0.36
RFX1-204ENST00000588885 EIF2AQ9BY44 585 aaKnown RBP12.81□□□□□ -0.36
RFX1-204ENST00000588885 RAPGEFL1Q9UHV5 662 aa12.81□□□□□ -0.36
RFX1-204ENST00000588885 PUF60Q9UHX1 559 aaKnown RBP12.81□□□□□ -0.36
RFX1-204ENST00000588885 DBR1Q9UK59 544 aaKnown RBP12.81□□□□□ -0.36
RFX1-204ENST00000588885 KIAA1024Q9UPX6 916 aa12.81□□□□□ -0.36
RFX1-204ENST00000588885 HCN4Q9Y3Q4 1203 aa12.81□□□□□ -0.36
RFX1-204ENST00000588885 ZNF623O75123 536 aa12.8□□□□□ -0.36
RFX1-204ENST00000588885 TBX10O75333 385 aa12.8□□□□□ -0.36
RFX1-204ENST00000588885 CA8P35219 290 aa12.8□□□□□ -0.36
RFX1-204ENST00000588885 ALDH7A1P49419 539 aaKnown RBP12.8□□□□□ -0.36
RFX1-204ENST00000588885 NDUFV1P49821 464 aa12.8□□□□□ -0.36
RFX1-204ENST00000588885 UBE3AQ05086 875 aa12.8□□□□□ -0.36
RFX1-204ENST00000588885 MBTD1Q05BQ5 628 aa12.8□□□□□ -0.36
RFX1-204ENST00000588885 NCBP1Q09161 790 aaKnown RBP12.8□□□□□ -0.36
RFX1-204ENST00000588885 COL19A1Q14993 1142 aa12.8□□□□□ -0.36
RFX1-204ENST00000588885 CSPP1Q1MSJ5 1256 aa12.8□□□□□ -0.36
RFX1-204ENST00000588885 CTC1Q2NKJ3 1217 aa12.8□□□□□ -0.36
RFX1-204ENST00000588885 PUS10Q3MIT2 529 aaKnown RBP12.8□□□□□ -0.36
RFX1-204ENST00000588885 AGMOQ6ZNB7 445 aa12.8□□□□□ -0.36
RFX1-204ENST00000588885 TMC7Q7Z402 723 aa12.8□□□□□ -0.36
RFX1-204ENST00000588885 MRPL10Q7Z7H8 261 aaKnown RBP12.8□□□□□ -0.36
RFX1-204ENST00000588885 ZNF280BQ86YH2 543 aa12.8□□□□□ -0.36
RFX1-204ENST00000588885 SNX29Q8TEQ0 813 aa12.8□□□□□ -0.36
RFX1-204ENST00000588885 BSNDQ8WZ55 320 aa12.8□□□□□ -0.36
RFX1-204ENST00000588885 PGBD4Q96DM1 585 aa12.8□□□□□ -0.36
RFX1-204ENST00000588885 TCF25Q9BQ70 676 aa12.8□□□□□ -0.36
RFX1-204ENST00000588885 MRPL9Q9BYD2 267 aaKnown RBP12.8□□□□□ -0.36
RFX1-204ENST00000588885 CD320Q9NPF0 282 aa12.8□□□□□ -0.36
RFX1-204ENST00000588885 ENTPD7Q9NQZ7 604 aa12.8□□□□□ -0.36
RFX1-204ENST00000588885 DDX19AQ9NUU7 478 aaKnown RBP12.8□□□□□ -0.36
RFX1-204ENST00000588885 TBC1D13Q9NVG8 400 aa12.8□□□□□ -0.36
RFX1-204ENST00000588885 USP20Q9Y2K6 914 aa12.8□□□□□ -0.36
RFX1-204ENST00000588885 HES2Q9Y543 173 aa12.8□□□□□ -0.36
RFX1-204ENST00000588885 HIDE1A8MVS5 230 aa12.79□□□□□ -0.36
RFX1-204ENST00000588885 FSCN2O14926 492 aa12.79□□□□□ -0.36
RFX1-204ENST00000588885 POMCP01189 267 aa12.79□□□□□ -0.36
RFX1-204ENST00000588885 ITGA4P13612 1032 aa12.79□□□□□ -0.36
RFX1-204ENST00000588885 CYP11B2P19099 503 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms