RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 PDXDC2PQ6P474 469 aa9.39□□□□□ -0.91
NEDD4L-218ENST00000587547 POTEGQ6S5H5 508 aa9.39□□□□□ -0.91
NEDD4L-218ENST00000587547 CCDC73Q6ZRK6 1079 aa9.39□□□□□ -0.91
NEDD4L-218ENST00000587547 TRIM67Q6ZTA4 783 aa9.39□□□□□ -0.91
NEDD4L-218ENST00000587547 SUGP1Q8IWZ8 645 aaKnown RBP9.39□□□□□ -0.91
NEDD4L-218ENST00000587547 ATP6V0A1Q93050 837 aa9.39□□□□□ -0.91
NEDD4L-218ENST00000587547 KCTD12Q96CX2 325 aaKnown RBP9.39□□□□□ -0.91
NEDD4L-218ENST00000587547 PCYT2Q99447 389 aa9.39□□□□□ -0.91
NEDD4L-218ENST00000587547 PRRX2Q99811 253 aa9.39□□□□□ -0.91
NEDD4L-218ENST00000587547 POLR3CQ9BUI4 534 aaPredicted RBP9.39□□□□□ -0.91
NEDD4L-218ENST00000587547 GOLPH3LQ9H4A5 285 aa9.39□□□□□ -0.91
NEDD4L-218ENST00000587547 CLDND1Q9NY35 253 aa9.39□□□□□ -0.91
NEDD4L-218ENST00000587547 CCDC39Q9UFE4 941 aa9.39□□□□□ -0.91
NEDD4L-218ENST00000587547 FAM50BQ9Y247 325 aa9.39□□□□□ -0.91
NEDD4L-218ENST00000587547 EMSYQ7Z589 1322 aa9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 IGSF9BQ9UPX0 1349 aa9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 KDM3AQ9Y4C1 1321 aa9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 A0A1W2PQ27 194 aa9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 A0A1W2PQ64 194 aa9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 A0A1W2PQD8 194 aa9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 PPFIA4O75335 1185 aa9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 LGR5O75473 907 aa9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 KRT37O76014 449 aa9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 SLITRK3O94933 977 aa9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 SPATA31C1P0DKV0 1188 aa9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 PLCG1P19174 1290 aa9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 RPA1P27694 616 aa9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 QARSP47897 775 aaKnown RBP9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 MMP16P51512 607 aa9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 UBE2HP62256 183 aa9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 PRKCEQ02156 737 aa9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 BFSP2Q13515 415 aa9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 ECM1Q16610 540 aa9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 RPAINQ86UA6 219 aa9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 CATSPER3Q86XQ3 398 aa9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 FBXL6Q8N531 539 aa9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 DHX58Q96C10 678 aa9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 CCDC43Q96MW1 224 aaKnown RBP9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 PNMA5Q96PV4 448 aa9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 CTAGE1Q96RT6 745 aa9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 MTG1Q9BT17 334 aaPredicted RBP9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 CCSER1Q9C0I3 900 aa9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 SMARCAD1Q9H4L7 1026 aa9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 ZSWIM4Q9H7M6 989 aa9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 TUFT1Q9NNX1 390 aa9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 PRDM9Q9NQV7 894 aa9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 LMBRD1Q9NUN5 540 aa9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 DDX19AQ9NUU7 478 aaKnown RBP9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 WRAP73Q9P2S5 460 aaPredicted RBP9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 KIAA1024Q9UPX6 916 aa9.38□□□□□ -0.91
NEDD4L-218ENST00000587547 DMDP11532 3685 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 RIF1Q5UIP0 2472 aaKnown RBP9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 A0A087X0B3 334 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 IGKV6D-21A0A0A0MT36 114 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 TMEM150BA6NC51 233 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 E9PMD0 336 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 H0Y858 1186 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 H3BRB1 525 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 ZBTB39O15060 712 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 POLR2DO15514 142 aaKnown RBP9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 MBTPS2O43462 519 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 ZNF862O60290 1169 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 KPNA6O60684 536 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 DKC1O60832 514 aaKnown RBP eCLIP9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 NBNO60934 754 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 SSBP05455 408 aaKnown RBP eCLIP9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 CCNYL3P0C7X3 344 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 HOXD8P13378 290 aaPredicted RBP9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 LIG1P18858 919 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 STAT6P42226 847 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 SYKP43405 635 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 NDUFA8P51970 172 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 DHX8Q14562 1220 aaKnown RBP9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 PLCB4Q15147 1175 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 PTPROQ16827 1216 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 TMEM119Q4V9L6 283 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 EPC2Q52LR7 807 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 RRAGBQ5VZM2 374 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 PLA2G4FQ68DD2 849 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 NFRKBQ6P4R8 1299 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 CNKSR3Q6P9H4 555 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 KCNK18Q7Z418 384 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 AFAP1L1Q8TED9 768 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 PIGOQ8TEQ8 1089 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 DHX38Q92620 1227 aaKnown RBP9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 POP1Q99575 1024 aaKnown RBP9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 HSD17B14Q9BPX1 270 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 C16orf70Q9BSU1 422 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 NT5C3AQ9H0P0 336 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 TUT1Q9H6E5 874 aaKnown RBP9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 TLR9Q9NR96 1032 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 EVA1BQ9NVM1 165 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 ERAP1Q9NZ08 941 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 ZNF215Q9UL58 517 aaPredicted RBP9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 KCNH3Q9ULD8 1083 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 MAFBQ9Y5Q3 323 aaPredicted RBP9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 MYO7AQ13402 2215 aa9.37□□□□□ -0.91
NEDD4L-218ENST00000587547 FAM186AA6NE01 2351 aa9.36□□□□□ -0.91
NEDD4L-218ENST00000587547 PRR23AA6NEV1 266 aa9.36□□□□□ -0.91
NEDD4L-218ENST00000587547 PROB1E7EW31 1015 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms