RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 ME3Q16798 604 aa16.97■□□□□ 0.31
PRKCSH-204ENST00000587290 PTPN21Q16825 1174 aa16.97■□□□□ 0.31
PRKCSH-204ENST00000587290 TPH2Q8IWU9 490 aa16.97■□□□□ 0.31
PRKCSH-204ENST00000587290 C4orf19Q8IY42 314 aa16.97■□□□□ 0.31
PRKCSH-204ENST00000587290 TNFRSF25Q93038 417 aa16.97■□□□□ 0.31
PRKCSH-204ENST00000587290 ASIC4Q96FT7 647 aa16.97■□□□□ 0.31
PRKCSH-204ENST00000587290 CPB2Q96IY4 423 aa16.97■□□□□ 0.31
PRKCSH-204ENST00000587290 JPH2Q9BR39 696 aaPredicted RBP16.97■□□□□ 0.31
PRKCSH-204ENST00000587290 XPNPEP1Q9NQW7 623 aa16.97■□□□□ 0.31
PRKCSH-204ENST00000587290 ZNF623O75123 536 aa16.96■□□□□ 0.31
PRKCSH-204ENST00000587290 POMCP01189 267 aa16.96■□□□□ 0.31
PRKCSH-204ENST00000587290 CTSAP10619 480 aa16.96■□□□□ 0.31
PRKCSH-204ENST00000587290 SKIP12755 728 aa16.96■□□□□ 0.31
PRKCSH-204ENST00000587290 KRT2P35908 639 aa16.96■□□□□ 0.31
PRKCSH-204ENST00000587290 RFC5P40937 340 aa16.96■□□□□ 0.31
PRKCSH-204ENST00000587290 RAB27AP51159 221 aa16.96■□□□□ 0.31
PRKCSH-204ENST00000587290 TPRNQ4KMQ1 711 aa16.96■□□□□ 0.31
PRKCSH-204ENST00000587290 ZBTB33Q86T24 672 aa16.96■□□□□ 0.31
PRKCSH-204ENST00000587290 DDX53Q86TM3 631 aaKnown RBP16.96■□□□□ 0.31
PRKCSH-204ENST00000587290 FERMT3Q86UX7 667 aa16.96■□□□□ 0.31
PRKCSH-204ENST00000587290 EIF2AQ9BY44 585 aaKnown RBP16.96■□□□□ 0.31
PRKCSH-204ENST00000587290 ADAM7Q9H2U9 754 aa16.96■□□□□ 0.31
PRKCSH-204ENST00000587290 RSAD1Q9HA92 442 aa16.96■□□□□ 0.31
PRKCSH-204ENST00000587290 HES2Q9Y543 173 aa16.96■□□□□ 0.31
PRKCSH-204ENST00000587290 F8W810 466 aa16.95■□□□□ 0.3
PRKCSH-204ENST00000587290 TBX3O15119 743 aa16.95■□□□□ 0.3
PRKCSH-204ENST00000587290 DKC1O60832 514 aaKnown RBP eCLIP16.95■□□□□ 0.3
PRKCSH-204ENST00000587290 ASGR2P07307 311 aa16.95■□□□□ 0.3
PRKCSH-204ENST00000587290 SIGLEC14Q08ET2 396 aa16.95■□□□□ 0.3
PRKCSH-204ENST00000587290 PTPN14Q15678 1187 aa16.95■□□□□ 0.3
PRKCSH-204ENST00000587290 CES5AQ6NT32 575 aa16.95■□□□□ 0.3
PRKCSH-204ENST00000587290 BMP8AQ7Z5Y6 402 aa16.95■□□□□ 0.3
PRKCSH-204ENST00000587290 SRGAP1Q7Z6B7 1085 aa16.95■□□□□ 0.3
PRKCSH-204ENST00000587290 SUGP1Q8IWZ8 645 aaKnown RBP16.95■□□□□ 0.3
PRKCSH-204ENST00000587290 SMG8Q8ND04 991 aaKnown RBP16.95■□□□□ 0.3
PRKCSH-204ENST00000587290 URGCPQ8TCY9 931 aa16.95■□□□□ 0.3
PRKCSH-204ENST00000587290 ASAP3Q8TDY4 903 aa16.95■□□□□ 0.3
PRKCSH-204ENST00000587290 SLC22A17Q8WUG5 538 aa16.95■□□□□ 0.3
PRKCSH-204ENST00000587290 GTF3C6Q969F1 213 aa16.95■□□□□ 0.3
PRKCSH-204ENST00000587290 MTRQ99707 1265 aa16.95■□□□□ 0.3
PRKCSH-204ENST00000587290 EIF2AK1Q9BQI3 630 aaKnown RBP16.95■□□□□ 0.3
PRKCSH-204ENST00000587290 RNF39Q9H2S5 420 aa16.95■□□□□ 0.3
PRKCSH-204ENST00000587290 PRG3Q9Y2Y8 225 aaPredicted RBP16.95■□□□□ 0.3
PRKCSH-204ENST00000587290 BTBD18B2RXH4 712 aa16.94■□□□□ 0.3
PRKCSH-204ENST00000587290 C2CD2LO14523 706 aa16.94■□□□□ 0.3
PRKCSH-204ENST00000587290 TSPAN1O60635 241 aa16.94■□□□□ 0.3
PRKCSH-204ENST00000587290 SLITRK3O94933 977 aa16.94■□□□□ 0.3
PRKCSH-204ENST00000587290 MYBP10242 640 aa16.94■□□□□ 0.3
PRKCSH-204ENST00000587290 ST3GAL1Q11201 340 aa16.94■□□□□ 0.3
PRKCSH-204ENST00000587290 CALCRLQ16602 461 aa16.94■□□□□ 0.3
PRKCSH-204ENST00000587290 TMC5Q6UXY8 1006 aa16.94■□□□□ 0.3
PRKCSH-204ENST00000587290 MRPL10Q7Z7H8 261 aaKnown RBP16.94■□□□□ 0.3
PRKCSH-204ENST00000587290 CDR2LQ86X02 465 aaPredicted RBP16.94■□□□□ 0.3
PRKCSH-204ENST00000587290 FBXL6Q8N531 539 aa16.94■□□□□ 0.3
PRKCSH-204ENST00000587290 TMEM87AQ8NBN3 555 aa16.94■□□□□ 0.3
PRKCSH-204ENST00000587290 KREMEN2Q8NCW0 462 aa16.94■□□□□ 0.3
PRKCSH-204ENST00000587290 NSUN7Q8NE18 718 aaKnown RBP16.94■□□□□ 0.3
PRKCSH-204ENST00000587290 PGBD4Q96DM1 585 aa16.94■□□□□ 0.3
PRKCSH-204ENST00000587290 APOL6Q9BWW8 343 aa16.94■□□□□ 0.3
PRKCSH-204ENST00000587290 ZSWIM4Q9H7M6 989 aa16.94■□□□□ 0.3
PRKCSH-204ENST00000587290 USP34Q70CQ2 3546 aa16.94■□□□□ 0.3
PRKCSH-204ENST00000587290 CACNA1HO95180 2353 aa16.94■□□□□ 0.3
PRKCSH-204ENST00000587290 ERLIN2O94905 339 aa16.93■□□□□ 0.3
PRKCSH-204ENST00000587290 BRD1O95696 1058 aa16.93■□□□□ 0.3
PRKCSH-204ENST00000587290 MLH1P40692 756 aa16.93■□□□□ 0.3
PRKCSH-204ENST00000587290 GUCY1B3Q02153 619 aa16.93■□□□□ 0.3
PRKCSH-204ENST00000587290 CAPSQ13938 189 aa16.93■□□□□ 0.3
PRKCSH-204ENST00000587290 OTUD6AQ7L8S5 288 aa16.93■□□□□ 0.3
PRKCSH-204ENST00000587290 SLFN12Q8IYM2 578 aa16.93■□□□□ 0.3
PRKCSH-204ENST00000587290 PIGOQ8TEQ8 1089 aa16.93■□□□□ 0.3
PRKCSH-204ENST00000587290 ZFP42Q96MM3 310 aa16.93■□□□□ 0.3
PRKCSH-204ENST00000587290 GAD1Q99259 594 aa16.93■□□□□ 0.3
PRKCSH-204ENST00000587290 MARCH5Q9NX47 278 aa16.93■□□□□ 0.3
PRKCSH-204ENST00000587290 NR2E1Q9Y466 385 aa16.93■□□□□ 0.3
PRKCSH-204ENST00000587290 IPPQ9Y573 584 aa16.93■□□□□ 0.3
PRKCSH-204ENST00000587290 POTEMA6NI47 508 aa16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 INO80B-WBP1J3KQ70 363 aa16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 NRP1O14786 923 aa16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 B4GALT5O43286 388 aa16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 BAG4O95429 457 aaKnown RBP16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 NEFLP07196 543 aa16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 CNPP09543 421 aaKnown RBP16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 ATP2B1P20020 1258 aa16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 TXKP42681 527 aa16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 ANAPC15P60006 121 aa16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 ITIH3Q06033 890 aa16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 TCF15Q12870 199 aa16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 BMS1Q14692 1282 aaKnown RBP16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 ANKRD1Q15327 319 aa16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 KIAA1841Q6NSI8 718 aa16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 MAEAQ7L5Y9 396 aa16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 TAS1R1Q7RTX1 841 aa16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 CABP7Q86V35 215 aa16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 DIS3L2Q8IYB7 885 aaKnown RBP16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 TCP11Q8WWU5 503 aa16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 WASF1Q92558 559 aa16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 KLHL5Q96PQ7 755 aa16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 NAP1L4Q99733 375 aaKnown RBP16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 KCNH6Q9H252 994 aa16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 TMEM60Q9H2L4 133 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms