RNA–Protein interactions for RNA: ENST00000587173.5

VAT1-205, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-205ENST00000587173 AGMOQ6ZNB7 445 aa17.54■□□□□ 0.4
VAT1-205ENST00000587173 ZNF280BQ86YH2 543 aa17.54■□□□□ 0.4
VAT1-205ENST00000587173 POTEDQ86YR6 584 aa17.54■□□□□ 0.4
VAT1-205ENST00000587173 C4orf19Q8IY42 314 aa17.54■□□□□ 0.4
VAT1-205ENST00000587173 KREMEN2Q8NCW0 462 aa17.54■□□□□ 0.4
VAT1-205ENST00000587173 MINDY3Q9H8M7 445 aa17.54■□□□□ 0.4
VAT1-205ENST00000587173 RSAD1Q9HA92 442 aa17.54■□□□□ 0.4
VAT1-205ENST00000587173 RGL1Q9NZL6 768 aa17.54■□□□□ 0.4
VAT1-205ENST00000587173 IRAK3Q9Y616 596 aa17.54■□□□□ 0.4
VAT1-205ENST00000587173 YWHABP31946 246 aaKnown RBP17.53■□□□□ 0.4
VAT1-205ENST00000587173 LAMTOR4Q0VGL1 99 aa17.53■□□□□ 0.4
VAT1-205ENST00000587173 EMC2Q15006 297 aa17.53■□□□□ 0.4
VAT1-205ENST00000587173 EARS2Q5JPH6 523 aaKnown RBP17.53■□□□□ 0.4
VAT1-205ENST00000587173 KIAA1841Q6NSI8 718 aa17.53■□□□□ 0.4
VAT1-205ENST00000587173 KANK3Q6NY19 840 aa17.53■□□□□ 0.4
VAT1-205ENST00000587173 MRPL10Q7Z7H8 261 aaKnown RBP17.53■□□□□ 0.4
VAT1-205ENST00000587173 SLFN12Q8IYM2 578 aa17.53■□□□□ 0.4
VAT1-205ENST00000587173 SLC22A17Q8WUG5 538 aa17.53■□□□□ 0.4
VAT1-205ENST00000587173 DYDC2Q96IM9 177 aa17.53■□□□□ 0.4
VAT1-205ENST00000587173 PHOX2BQ99453 314 aa17.53■□□□□ 0.4
VAT1-205ENST00000587173 VN1R3Q9BXE9 311 aa17.53■□□□□ 0.4
VAT1-205ENST00000587173 PIEZO1Q92508 2521 aa17.53■□□□□ 0.4
VAT1-205ENST00000587173 TRIOO75962 3097 aa17.52■□□□□ 0.4
VAT1-205ENST00000587173 WDFY4Q6ZS81 3184 aa17.52■□□□□ 0.4
VAT1-205ENST00000587173 GAS2O43903 313 aaKnown RBP17.52■□□□□ 0.4
VAT1-205ENST00000587173 DDHD2O94830 711 aa17.52■□□□□ 0.4
VAT1-205ENST00000587173 HOXA11P31270 313 aaPredicted RBP17.52■□□□□ 0.4
VAT1-205ENST00000587173 KRT2P35908 639 aa17.52■□□□□ 0.4
VAT1-205ENST00000587173 AFF1P51825 1210 aaKnown RBP17.52■□□□□ 0.4
VAT1-205ENST00000587173 AK2P54819 239 aa17.52■□□□□ 0.4
VAT1-205ENST00000587173 CYP4A11Q02928 519 aa17.52■□□□□ 0.4
VAT1-205ENST00000587173 TCF15Q12870 199 aa17.52■□□□□ 0.4
VAT1-205ENST00000587173 MTMR3Q13615 1198 aa17.52■□□□□ 0.4
VAT1-205ENST00000587173 CTTNQ14247 550 aaKnown RBP17.52■□□□□ 0.4
VAT1-205ENST00000587173 PTPN14Q15678 1187 aa17.52■□□□□ 0.4
VAT1-205ENST00000587173 XKR9Q5GH70 373 aa17.52■□□□□ 0.4
VAT1-205ENST00000587173 ATAT1Q5SQI0 421 aa17.52■□□□□ 0.4
VAT1-205ENST00000587173 UBXN11Q5T124 520 aa17.52■□□□□ 0.4
VAT1-205ENST00000587173 TDRD5Q8NAT2 981 aaKnown RBP17.52■□□□□ 0.4
VAT1-205ENST00000587173 RNF149Q8NC42 400 aa17.52■□□□□ 0.4
VAT1-205ENST00000587173 TCP11Q8WWU5 503 aa17.52■□□□□ 0.4
VAT1-205ENST00000587173 FAM193BQ96PV7 902 aaPredicted RBP17.52■□□□□ 0.4
VAT1-205ENST00000587173 ZSWIM4Q9H7M6 989 aa17.52■□□□□ 0.4
VAT1-205ENST00000587173 PPP4R2Q9NY27 417 aa17.52■□□□□ 0.4
VAT1-205ENST00000587173 DBR1Q9UK59 544 aaKnown RBP17.52■□□□□ 0.4
VAT1-205ENST00000587173 SORCS3Q9UPU3 1222 aa17.52■□□□□ 0.4
VAT1-205ENST00000587173 CNTNAP2Q9UHC6 1331 aa17.51■□□□□ 0.39
VAT1-205ENST00000587173 FAM205CA6NFA0 338 aa17.51■□□□□ 0.39
VAT1-205ENST00000587173 ASAP2O43150 1006 aa17.51■□□□□ 0.39
VAT1-205ENST00000587173 CTDNEP1O95476 244 aa17.51■□□□□ 0.39
VAT1-205ENST00000587173 PDGFBP01127 241 aaPredicted RBP17.51■□□□□ 0.39
VAT1-205ENST00000587173 SSBP05455 408 aaKnown RBP eCLIP17.51■□□□□ 0.39
VAT1-205ENST00000587173 AVPR2P30518 371 aa17.51■□□□□ 0.39
VAT1-205ENST00000587173 SPIRE1Q08AE8 756 aa17.51■□□□□ 0.39
VAT1-205ENST00000587173 FERMT3Q86UX7 667 aa17.51■□□□□ 0.39
VAT1-205ENST00000587173 CABP7Q86V35 215 aa17.51■□□□□ 0.39
VAT1-205ENST00000587173 PPFIBP1Q86W92 1011 aa17.51■□□□□ 0.39
VAT1-205ENST00000587173 UBALD2Q8IYN6 164 aa17.51■□□□□ 0.39
VAT1-205ENST00000587173 MTRQ99707 1265 aa17.51■□□□□ 0.39
VAT1-205ENST00000587173 TMEM175Q9BSA9 504 aa17.51■□□□□ 0.39
VAT1-205ENST00000587173 KANSL3Q9P2N6 904 aa17.51■□□□□ 0.39
VAT1-205ENST00000587173 STK39Q9UEW8 545 aa17.51■□□□□ 0.39
VAT1-205ENST00000587173 FAN1Q9Y2M0 1017 aa17.51■□□□□ 0.39
VAT1-205ENST00000587173 SPDYE4A6NLX3 237 aa17.5■□□□□ 0.39
VAT1-205ENST00000587173 ZBTB39O15060 712 aa17.5■□□□□ 0.39
VAT1-205ENST00000587173 ERLIN2O94905 339 aa17.5■□□□□ 0.39
VAT1-205ENST00000587173 BRD1O95696 1058 aa17.5■□□□□ 0.39
VAT1-205ENST00000587173 POMCP01189 267 aa17.5■□□□□ 0.39
VAT1-205ENST00000587173 NCLP19338 710 aaKnown RBP17.5■□□□□ 0.39
VAT1-205ENST00000587173 NR5A1Q13285 461 aa17.5■□□□□ 0.39
VAT1-205ENST00000587173 TRIM29Q14134 588 aa17.5■□□□□ 0.39
VAT1-205ENST00000587173 TMC5Q6UXY8 1006 aa17.5■□□□□ 0.39
VAT1-205ENST00000587173 TPH2Q8IWU9 490 aa17.5■□□□□ 0.39
VAT1-205ENST00000587173 EMILIN2Q9BXX0 1053 aa17.5■□□□□ 0.39
VAT1-205ENST00000587173 SFXN1Q9H9B4 322 aa17.5■□□□□ 0.39
VAT1-205ENST00000587173 PCDHA12Q9UN75 941 aa17.5■□□□□ 0.39
VAT1-205ENST00000587173 NRP1O14786 923 aa17.49■□□□□ 0.39
VAT1-205ENST00000587173 ALDH2P05091 517 aa17.49■□□□□ 0.39
VAT1-205ENST00000587173 ASGR2P07307 311 aa17.49■□□□□ 0.39
VAT1-205ENST00000587173 ITGA4P13612 1032 aa17.49■□□□□ 0.39
VAT1-205ENST00000587173 KLRC2P26717 231 aa17.49■□□□□ 0.39
VAT1-205ENST00000587173 NCBP1Q09161 790 aaKnown RBP17.49■□□□□ 0.39
VAT1-205ENST00000587173 ZDHHC14Q8IZN3 488 aa17.49■□□□□ 0.39
VAT1-205ENST00000587173 NECAB1Q8N987 351 aa17.49■□□□□ 0.39
VAT1-205ENST00000587173 SMG8Q8ND04 991 aaKnown RBP17.49■□□□□ 0.39
VAT1-205ENST00000587173 CNNM3Q8NE01 707 aa17.49■□□□□ 0.39
VAT1-205ENST00000587173 FEZF2Q8TBJ5 459 aa17.49■□□□□ 0.39
VAT1-205ENST00000587173 KLHL5Q96PQ7 755 aa17.49■□□□□ 0.39
VAT1-205ENST00000587173 EIF2AQ9BY44 585 aaKnown RBP17.49■□□□□ 0.39
VAT1-205ENST00000587173 SMOC2Q9H3U7 446 aa17.49■□□□□ 0.39
VAT1-205ENST00000587173 XPNPEP1Q9NQW7 623 aa17.49■□□□□ 0.39
VAT1-205ENST00000587173 IPPQ9Y573 584 aa17.49■□□□□ 0.39
VAT1-205ENST00000587173 TSPAN1O60635 241 aa17.48■□□□□ 0.39
VAT1-205ENST00000587173 SLITRK3O94933 977 aa17.48■□□□□ 0.39
VAT1-205ENST00000587173 CNPP09543 421 aaKnown RBP17.48■□□□□ 0.39
VAT1-205ENST00000587173 CLCN4P51793 760 aa17.48■□□□□ 0.39
VAT1-205ENST00000587173 PTENP60484 403 aa17.48■□□□□ 0.39
VAT1-205ENST00000587173 MXD4Q14582 209 aaPredicted RBP17.48■□□□□ 0.39
VAT1-205ENST00000587173 PLCD3Q8N3E9 789 aa17.48■□□□□ 0.39
VAT1-205ENST00000587173 TNFRSF25Q93038 417 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms