RNA–Protein interactions for RNA: ENST00000586718.1

NPC1-204, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-204ENST00000586718 TCERG1LQ5VWI1 586 aa9.33□□□□□ -0.92
NPC1-204ENST00000586718 SLFN12LQ6IEE8 588 aa9.33□□□□□ -0.92
NPC1-204ENST00000586718 CXCL17Q6UXB2 119 aa9.33□□□□□ -0.92
NPC1-204ENST00000586718 ZPBP2Q6X784 338 aa9.33□□□□□ -0.92
NPC1-204ENST00000586718 APBB1IPQ7Z5R6 666 aaPredicted RBP9.33□□□□□ -0.92
NPC1-204ENST00000586718 FRMD5Q7Z6J6 570 aa9.33□□□□□ -0.92
NPC1-204ENST00000586718 KSR1Q8IVT5 923 aa9.33□□□□□ -0.92
NPC1-204ENST00000586718 VSTM4Q8IW00 320 aa9.33□□□□□ -0.92
NPC1-204ENST00000586718 LINC01465Q8N7H1 131 aa9.33□□□□□ -0.92
NPC1-204ENST00000586718 XXYLT1Q8NBI6 393 aa9.33□□□□□ -0.92
NPC1-204ENST00000586718 SPC24Q8NBT2 197 aa9.33□□□□□ -0.92
NPC1-204ENST00000586718 ARRDC4Q8NCT1 418 aa9.33□□□□□ -0.92
NPC1-204ENST00000586718 CCDC150Q8NCX0 1101 aa9.33□□□□□ -0.92
NPC1-204ENST00000586718 KLHDC9Q8NEP7 349 aa9.33□□□□□ -0.92
NPC1-204ENST00000586718 POMGNT1Q8WZA1 660 aa9.33□□□□□ -0.92
NPC1-204ENST00000586718 PCMTD1Q96MG8 357 aaPredicted RBP9.33□□□□□ -0.92
NPC1-204ENST00000586718 GLT1D1Q96MS3 346 aa9.33□□□□□ -0.92
NPC1-204ENST00000586718 INO80BQ9C086 356 aaPredicted RBP9.33□□□□□ -0.92
NPC1-204ENST00000586718 FAM49AQ9H0Q0 323 aaPredicted RBP9.33□□□□□ -0.92
NPC1-204ENST00000586718 IMPACTQ9P2X3 320 aa9.33□□□□□ -0.92
NPC1-204ENST00000586718 NOD1Q9Y239 953 aa9.33□□□□□ -0.92
NPC1-204ENST00000586718 PTPN22Q9Y2R2 807 aa9.33□□□□□ -0.92
NPC1-204ENST00000586718 PCNTO95613 3336 aa9.33□□□□□ -0.92
NPC1-204ENST00000586718 ITIH6Q6UXX5 1313 aa9.32□□□□□ -0.92
NPC1-204ENST00000586718 MBLAC1A4D2B0 266 aaPredicted RBP9.32□□□□□ -0.92
NPC1-204ENST00000586718 MAPK13O15264 365 aa9.32□□□□□ -0.92
NPC1-204ENST00000586718 STX10O60499 249 aa9.32□□□□□ -0.92
NPC1-204ENST00000586718 ERLIN2O94905 339 aa9.32□□□□□ -0.92
NPC1-204ENST00000586718 VTNP04004 478 aa9.32□□□□□ -0.92
NPC1-204ENST00000586718 GPC3P51654 580 aa9.32□□□□□ -0.92
NPC1-204ENST00000586718 PTENP60484 403 aa9.32□□□□□ -0.92
NPC1-204ENST00000586718 UBXN1Q04323 297 aa9.32□□□□□ -0.92
NPC1-204ENST00000586718 PTPN11Q06124 597 aaPredicted RBP9.32□□□□□ -0.92
NPC1-204ENST00000586718 NCBP1Q09161 790 aaKnown RBP9.32□□□□□ -0.92
NPC1-204ENST00000586718 MKRN4PQ13434 485 aaPredicted RBP9.32□□□□□ -0.92
NPC1-204ENST00000586718 PRPF4BQ13523 1007 aaKnown RBP9.32□□□□□ -0.92
NPC1-204ENST00000586718 VWA3BQ502W6 1294 aa9.32□□□□□ -0.92
NPC1-204ENST00000586718 SPECC1LQ69YQ0 1117 aa9.32□□□□□ -0.92
NPC1-204ENST00000586718 INTS8Q75QN2 995 aaKnown RBP9.32□□□□□ -0.92
NPC1-204ENST00000586718 CTU1Q7Z7A3 348 aaKnown RBP9.32□□□□□ -0.92
NPC1-204ENST00000586718 IFNLR1Q8IU57 520 aaPredicted RBP9.32□□□□□ -0.92
NPC1-204ENST00000586718 IRF2BP1Q8IU81 584 aa9.32□□□□□ -0.92
NPC1-204ENST00000586718 TRIM59Q8IWR1 403 aa9.32□□□□□ -0.92
NPC1-204ENST00000586718 SH3TC2Q8TF17 1288 aa9.32□□□□□ -0.92
NPC1-204ENST00000586718 TMEM174Q8WUU8 243 aa9.32□□□□□ -0.92
NPC1-204ENST00000586718 IQCDQ96DY2 449 aa9.32□□□□□ -0.92
NPC1-204ENST00000586718 EEF2KMTQ96G04 330 aa9.32□□□□□ -0.92
NPC1-204ENST00000586718 PRIMPOLQ96LW4 560 aa9.32□□□□□ -0.92
NPC1-204ENST00000586718 TSEN34Q9BSV6 310 aaKnown RBP9.32□□□□□ -0.92
NPC1-204ENST00000586718 MSTO1Q9BUK6 570 aa9.32□□□□□ -0.92
NPC1-204ENST00000586718 GCOM2Q9BZD3 368 aaPredicted RBP9.32□□□□□ -0.92
NPC1-204ENST00000586718 CCDC113Q9H0I3 377 aa9.32□□□□□ -0.92
NPC1-204ENST00000586718 KIAA1586Q9HCI6 787 aa9.32□□□□□ -0.92
NPC1-204ENST00000586718 RTN4Q9NQC3 1192 aaKnown RBP9.32□□□□□ -0.92
NPC1-204ENST00000586718 HSPBP1Q9NZL4 362 aa9.32□□□□□ -0.92
NPC1-204ENST00000586718 ANKFY1Q9P2R3 1169 aa9.32□□□□□ -0.92
NPC1-204ENST00000586718 HDAC6Q9UBN7 1215 aa9.32□□□□□ -0.92
NPC1-204ENST00000586718 GTF2IRD1Q9UHL9 959 aa9.32□□□□□ -0.92
NPC1-204ENST00000586718 CNTNAP2Q9UHC6 1331 aa9.31□□□□□ -0.92
NPC1-204ENST00000586718 HTTP42858 3142 aa9.31□□□□□ -0.92
NPC1-204ENST00000586718 A0A1W2PQC6 194 aa9.31□□□□□ -0.92
NPC1-204ENST00000586718 LRRC10BA6NIK2 292 aa9.31□□□□□ -0.92
NPC1-204ENST00000586718 ACKR2O00590 384 aa9.31□□□□□ -0.92
NPC1-204ENST00000586718 N4BP1O75113 896 aaKnown RBP9.31□□□□□ -0.92
NPC1-204ENST00000586718 AKAP3O75969 853 aa9.31□□□□□ -0.92
NPC1-204ENST00000586718 LDHAP00338 332 aaKnown RBP9.31□□□□□ -0.92
NPC1-204ENST00000586718 AFPP02771 609 aaKnown RBP9.31□□□□□ -0.92
NPC1-204ENST00000586718 HARSP12081 509 aaKnown RBP9.31□□□□□ -0.92
NPC1-204ENST00000586718 SFPQP23246 707 aaKnown RBP eCLIP9.31□□□□□ -0.92
NPC1-204ENST00000586718 ACLYP53396 1101 aa9.31□□□□□ -0.92
NPC1-204ENST00000586718 IRX5P78411 483 aaPredicted RBP9.31□□□□□ -0.92
NPC1-204ENST00000586718 MBTD1Q05BQ5 628 aa9.31□□□□□ -0.92
NPC1-204ENST00000586718 CETN1Q12798 172 aa9.31□□□□□ -0.92
NPC1-204ENST00000586718 BFSP1Q12934 665 aa9.31□□□□□ -0.92
NPC1-204ENST00000586718 NOLC1Q14978 699 aaKnown RBP eCLIP9.31□□□□□ -0.928e-6■■□□□ 11.9
NPC1-204ENST00000586718 PCBP1Q15365 356 aaKnown RBP eCLIP9.31□□□□□ -0.92
NPC1-204ENST00000586718 KCNA10Q16322 511 aa9.31□□□□□ -0.92
NPC1-204ENST00000586718 SNRNP35Q16560 246 aaKnown RBP9.31□□□□□ -0.92
NPC1-204ENST00000586718 NBPF20Q3BBV1 942 aa9.31□□□□□ -0.92
NPC1-204ENST00000586718 ZNF568Q3ZCX4 644 aa9.31□□□□□ -0.92
NPC1-204ENST00000586718 MARCH8Q5T0T0 291 aa9.31□□□□□ -0.92
NPC1-204ENST00000586718 APTXQ7Z2E3 356 aaKnown RBP9.31□□□□□ -0.92
NPC1-204ENST00000586718 SRGAP1Q7Z6B7 1085 aa9.31□□□□□ -0.92
NPC1-204ENST00000586718 SESTD1Q86VW0 696 aa9.31□□□□□ -0.92
NPC1-204ENST00000586718 PPFIBP1Q86W92 1011 aa9.31□□□□□ -0.92
NPC1-204ENST00000586718 GPD1LQ8N335 351 aa9.31□□□□□ -0.92
NPC1-204ENST00000586718 NME8Q8N427 588 aa9.31□□□□□ -0.92
NPC1-204ENST00000586718 VTI1AQ96AJ9 217 aa9.31□□□□□ -0.92
NPC1-204ENST00000586718 ZBTB10Q96DT7 871 aa9.31□□□□□ -0.92
NPC1-204ENST00000586718 NAP1L5Q96NT1 182 aaPredicted RBP9.31□□□□□ -0.92
NPC1-204ENST00000586718 CBWD1Q9BRT8 395 aa9.31□□□□□ -0.92
NPC1-204ENST00000586718 SEZ6LQ9BYH1 1024 aa9.31□□□□□ -0.92
NPC1-204ENST00000586718 NDST4Q9H3R1 872 aa9.31□□□□□ -0.92
NPC1-204ENST00000586718 PCIF1Q9H4Z3 704 aa9.31□□□□□ -0.92
NPC1-204ENST00000586718 DMAC2Q9NW81 257 aa9.31□□□□□ -0.92
NPC1-204ENST00000586718 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.31□□□□□ -0.92
NPC1-204ENST00000586718 RALGAPA2Q2PPJ7 1873 aa9.31□□□□□ -0.92
NPC1-204ENST00000586718 A0A087WZ62 844 aa9.3□□□□□ -0.92
NPC1-204ENST00000586718 A0A0U1RQG5 324 aaPredicted RBP9.3□□□□□ -0.92
NPC1-204ENST00000586718 CLDN3O15551 220 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms