RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 PAN2Q504Q3 1202 aaKnown RBP17.96■□□□□ 0.46
ERBB2-222ENST00000584908 ARSHQ5FYA8 562 aa17.96■□□□□ 0.46
ERBB2-222ENST00000584908 CNNM3Q8NE01 707 aa17.96■□□□□ 0.46
ERBB2-222ENST00000584908 RAD54LQ92698 747 aa17.96■□□□□ 0.46
ERBB2-222ENST00000584908 NTPCRQ9BSD7 190 aaKnown RBP17.96■□□□□ 0.46
ERBB2-222ENST00000584908 C11orf84Q9BUA3 381 aaPredicted RBP17.96■□□□□ 0.46
ERBB2-222ENST00000584908 CWH43Q9H720 699 aa17.96■□□□□ 0.46
ERBB2-222ENST00000584908 POLD4Q9HCU8 107 aa17.96■□□□□ 0.46
ERBB2-222ENST00000584908 TFIP11Q9UBB9 837 aaKnown RBP17.96■□□□□ 0.46
ERBB2-222ENST00000584908 ZDHHC9Q9Y397 364 aa17.96■□□□□ 0.46
ERBB2-222ENST00000584908 CNTNAP2Q9UHC6 1331 aa17.95■□□□□ 0.46
ERBB2-222ENST00000584908 PLXNA4Q9HCM2 1894 aa17.95■□□□□ 0.46
ERBB2-222ENST00000584908 UNC80Q8N2C7 3258 aa17.95■□□□□ 0.46
ERBB2-222ENST00000584908 ACKR2O00590 384 aa17.95■□□□□ 0.46
ERBB2-222ENST00000584908 GTPBP6O43824 516 aaPredicted RBP17.95■□□□□ 0.46
ERBB2-222ENST00000584908 NCLP19338 710 aaKnown RBP17.95■□□□□ 0.46
ERBB2-222ENST00000584908 IBSPP21815 317 aaPredicted RBP17.95■□□□□ 0.46
ERBB2-222ENST00000584908 DDIT3P35638 169 aa17.95■□□□□ 0.46
ERBB2-222ENST00000584908 NPTX2P47972 431 aa17.95■□□□□ 0.46
ERBB2-222ENST00000584908 SPECC1Q5M775 1068 aa17.95■□□□□ 0.46
ERBB2-222ENST00000584908 FOXD4L5Q5VV16 416 aaPredicted RBP17.95■□□□□ 0.46
ERBB2-222ENST00000584908 LRRC55Q6ZSA7 311 aa17.95■□□□□ 0.46
ERBB2-222ENST00000584908 DEPTORQ8TB45 409 aa17.95■□□□□ 0.46
ERBB2-222ENST00000584908 FOXD4L4Q8WXT5 416 aaPredicted RBP17.95■□□□□ 0.46
ERBB2-222ENST00000584908 KCNN1Q92952 543 aa17.95■□□□□ 0.46
ERBB2-222ENST00000584908 PGBD4Q96DM1 585 aa17.95■□□□□ 0.46
ERBB2-222ENST00000584908 TYW1Q9NV66 732 aaKnown RBP17.95■□□□□ 0.46
ERBB2-222ENST00000584908 ARHGAP28Q9P2N2 729 aa17.95■□□□□ 0.46
ERBB2-222ENST00000584908 STK17AQ9UEE5 414 aa17.95■□□□□ 0.46
ERBB2-222ENST00000584908 KCNG1Q9UIX4 513 aa17.95■□□□□ 0.46
ERBB2-222ENST00000584908 MEIS3P2A8K0S8 358 aa17.94■□□□□ 0.46
ERBB2-222ENST00000584908 B4GALT5O43286 388 aa17.94■□□□□ 0.46
ERBB2-222ENST00000584908 SSBP05455 408 aaKnown RBP eCLIP17.94■□□□□ 0.46
ERBB2-222ENST00000584908 GPM6BQ13491 265 aa17.94■□□□□ 0.46
ERBB2-222ENST00000584908 MAPK6Q16659 721 aa17.94■□□□□ 0.46
ERBB2-222ENST00000584908 SLC27A1Q6PCB7 646 aa17.94■□□□□ 0.46
ERBB2-222ENST00000584908 AGMOQ6ZNB7 445 aa17.94■□□□□ 0.46
ERBB2-222ENST00000584908 ABI1Q8IZP0 508 aa17.94■□□□□ 0.46
ERBB2-222ENST00000584908 LRRC43Q8N309 656 aa17.94■□□□□ 0.46
ERBB2-222ENST00000584908 SMG8Q8ND04 991 aaKnown RBP17.94■□□□□ 0.46
ERBB2-222ENST00000584908 HELQQ8TDG4 1101 aa17.94■□□□□ 0.46
ERBB2-222ENST00000584908 SPIRE2Q8WWL2 714 aa17.94■□□□□ 0.46
ERBB2-222ENST00000584908 LARP4BQ92615 738 aaKnown RBP17.94■□□□□ 0.46
ERBB2-222ENST00000584908 CPB2Q96IY4 423 aa17.94■□□□□ 0.46
ERBB2-222ENST00000584908 EIF2AQ9BY44 585 aaKnown RBP17.94■□□□□ 0.46
ERBB2-222ENST00000584908 MRPL9Q9BYD2 267 aaKnown RBP17.94■□□□□ 0.46
ERBB2-222ENST00000584908 LMAN2LQ9H0V9 348 aa17.94■□□□□ 0.46
ERBB2-222ENST00000584908 TMEM134Q9H6X4 195 aa17.94■□□□□ 0.46
ERBB2-222ENST00000584908 CCDC39Q9UFE4 941 aa17.94■□□□□ 0.46
ERBB2-222ENST00000584908 ODF2LQ9ULJ1 636 aa17.94■□□□□ 0.46
ERBB2-222ENST00000584908 RBM19Q9Y4C8 960 aaKnown RBP17.94■□□□□ 0.46
ERBB2-222ENST00000584908 PHLPP2Q6ZVD8 1323 aa17.94■□□□□ 0.46
ERBB2-222ENST00000584908 TCHHQ07283 1943 aa17.93■□□□□ 0.46
ERBB2-222ENST00000584908 A0A0C4DFX4 3053 aa17.93■□□□□ 0.46
ERBB2-222ENST00000584908 INPPL1O15357 1258 aa17.93■□□□□ 0.46
ERBB2-222ENST00000584908 PRKCBP05771 671 aa17.93■□□□□ 0.46
ERBB2-222ENST00000584908 PLS3P13797 630 aa17.93■□□□□ 0.46
ERBB2-222ENST00000584908 TXLNAP40222 546 aa17.93■□□□□ 0.46
ERBB2-222ENST00000584908 ZNF131P52739 623 aa17.93■□□□□ 0.46
ERBB2-222ENST00000584908 PEX3P56589 373 aa17.93■□□□□ 0.46
ERBB2-222ENST00000584908 DMP1Q13316 513 aaPredicted RBP17.93■□□□□ 0.46
ERBB2-222ENST00000584908 MCM6Q14566 821 aa17.93■□□□□ 0.46
ERBB2-222ENST00000584908 CSPP1Q1MSJ5 1256 aa17.93■□□□□ 0.46
ERBB2-222ENST00000584908 RNF169Q8NCN4 708 aa17.93■□□□□ 0.46
ERBB2-222ENST00000584908 RASSF8Q8NHQ8 419 aa17.93■□□□□ 0.46
ERBB2-222ENST00000584908 LPPQ93052 612 aa17.93■□□□□ 0.46
ERBB2-222ENST00000584908 MRPL38Q96DV4 380 aaKnown RBP17.93■□□□□ 0.46
ERBB2-222ENST00000584908 KIFC3Q9BVG8 833 aa17.93■□□□□ 0.46
ERBB2-222ENST00000584908 UBN1Q9NPG3 1134 aa17.93■□□□□ 0.46
ERBB2-222ENST00000584908 AAASQ9NRG9 546 aa17.93■□□□□ 0.46
ERBB2-222ENST00000584908 CFAP45Q9UL16 551 aa17.93■□□□□ 0.46
ERBB2-222ENST00000584908 IPPQ9Y573 584 aa17.93■□□□□ 0.46
ERBB2-222ENST00000584908 MYO7AQ13402 2215 aa17.93■□□□□ 0.46
ERBB2-222ENST00000584908 ZMYM2Q9UBW7 1377 aa17.93■□□□□ 0.46
ERBB2-222ENST00000584908 TTLL13PA6NNM8 815 aa17.92■□□□□ 0.46
ERBB2-222ENST00000584908 CUTAO60888 179 aa17.92■□□□□ 0.46
ERBB2-222ENST00000584908 OFD1O75665 1012 aa17.92■□□□□ 0.46
ERBB2-222ENST00000584908 EDN1P05305 212 aa17.92■□□□□ 0.46
ERBB2-222ENST00000584908 LAG3P18627 525 aa17.92■□□□□ 0.46
ERBB2-222ENST00000584908 PRPF4BQ13523 1007 aaKnown RBP17.92■□□□□ 0.46
ERBB2-222ENST00000584908 AXDND1Q5T1B0 1012 aaPredicted RBP17.92■□□□□ 0.46
ERBB2-222ENST00000584908 GLB1LQ6UWU2 654 aa17.92■□□□□ 0.46
ERBB2-222ENST00000584908 GPBP1Q86WP2 473 aa17.92■□□□□ 0.46
ERBB2-222ENST00000584908 KCNG4Q8TDN1 519 aa17.92■□□□□ 0.46
ERBB2-222ENST00000584908 REEP2Q9BRK0 252 aa17.92■□□□□ 0.46
ERBB2-222ENST00000584908 HCSTQ9UBK5 93 aa17.92■□□□□ 0.46
ERBB2-222ENST00000584908 RCOR1Q9UKL0 485 aa17.92■□□□□ 0.46
ERBB2-222ENST00000584908 PLAGL2Q9UPG8 496 aa17.92■□□□□ 0.46
ERBB2-222ENST00000584908 TDRD15B5MCY1 1934 aaKnown RBP17.92■□□□□ 0.46
ERBB2-222ENST00000584908 BRWD1Q9NSI6 2320 aa17.91■□□□□ 0.46
ERBB2-222ENST00000584908 CCDC169A6NNP5 214 aa17.91■□□□□ 0.46
ERBB2-222ENST00000584908 K7ERI5 159 aa17.91■□□□□ 0.46
ERBB2-222ENST00000584908 N4BP3O15049 544 aa17.91■□□□□ 0.46
ERBB2-222ENST00000584908 ITGB1P05556 798 aa17.91■□□□□ 0.46
ERBB2-222ENST00000584908 DNM1Q05193 864 aaKnown RBP17.91■□□□□ 0.46
ERBB2-222ENST00000584908 RAD51AP2Q09MP3 1159 aa17.91■□□□□ 0.46
ERBB2-222ENST00000584908 GIT2Q14161 759 aa17.91■□□□□ 0.46
ERBB2-222ENST00000584908 PTPROQ16827 1216 aa17.91■□□□□ 0.46
ERBB2-222ENST00000584908 NOMO2Q5JPE7 1267 aa17.91■□□□□ 0.46
ERBB2-222ENST00000584908 RRAGBQ5VZM2 374 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms