RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 TGM1P22735 817 aa12.54□□□□□ -0.4
CASC3-208ENST00000583649 CNR2P34972 360 aa12.54□□□□□ -0.4
CASC3-208ENST00000583649 CCR3P51677 355 aa12.54□□□□□ -0.4
CASC3-208ENST00000583649 NAPAP54920 295 aa12.54□□□□□ -0.4
CASC3-208ENST00000583649 ADCY1Q08828 1119 aa12.54□□□□□ -0.4
CASC3-208ENST00000583649 LONRF3Q496Y0 759 aa12.54□□□□□ -0.4
CASC3-208ENST00000583649 LIN9Q5TKA1 542 aa12.54□□□□□ -0.4
CASC3-208ENST00000583649 PPP1R18Q6NYC8 613 aa12.54□□□□□ -0.4
CASC3-208ENST00000583649 PRR23CQ6ZRP0 262 aa12.54□□□□□ -0.4
CASC3-208ENST00000583649 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.54□□□□□ -0.4
CASC3-208ENST00000583649 ZNF410Q86VK4 478 aa12.54□□□□□ -0.4
CASC3-208ENST00000583649 BCL7CQ8WUZ0 217 aaPredicted RBP12.54□□□□□ -0.4
CASC3-208ENST00000583649 RUFY2Q8WXA3 655 aa12.54□□□□□ -0.4
CASC3-208ENST00000583649 LPPQ93052 612 aa12.54□□□□□ -0.4
CASC3-208ENST00000583649 CLDN23Q96B33 292 aa12.54□□□□□ -0.4
CASC3-208ENST00000583649 MTA3Q9BTC8 594 aa12.54□□□□□ -0.4
CASC3-208ENST00000583649 PHF20Q9BVI0 1012 aa12.54□□□□□ -0.4
CASC3-208ENST00000583649 RSAD1Q9HA92 442 aa12.54□□□□□ -0.4
CASC3-208ENST00000583649 RXFP1Q9HBX9 757 aa12.54□□□□□ -0.4
CASC3-208ENST00000583649 PARD6AQ9NPB6 346 aa12.54□□□□□ -0.4
CASC3-208ENST00000583649 PRMT8Q9NR22 394 aaPredicted RBP12.54□□□□□ -0.4
CASC3-208ENST00000583649 SEMA4GQ9NTN9 838 aa12.54□□□□□ -0.4
CASC3-208ENST00000583649 FAM217BQ9NTX9 383 aaPredicted RBP12.54□□□□□ -0.4
CASC3-208ENST00000583649 GABBR1Q9UBS5 961 aa12.54□□□□□ -0.4
CASC3-208ENST00000583649 BAZ2BQ9UIF8 2168 aaKnown RBP12.54□□□□□ -0.4
CASC3-208ENST00000583649 CFAP47Q6ZTR5 3102 aa12.54□□□□□ -0.4
CASC3-208ENST00000583649 WDR64B1ANS9 1081 aa12.53□□□□□ -0.4
CASC3-208ENST00000583649 MAN2B1O00754 1011 aa12.53□□□□□ -0.4
CASC3-208ENST00000583649 XYLBO75191 536 aa12.53□□□□□ -0.4
CASC3-208ENST00000583649 PAPLNO95428 1278 aa12.53□□□□□ -0.4
CASC3-208ENST00000583649 OATP04181 439 aa12.53□□□□□ -0.4
CASC3-208ENST00000583649 ATP4AP20648 1035 aa12.53□□□□□ -0.4
CASC3-208ENST00000583649 FGFR4P22455 802 aa12.53□□□□□ -0.4
CASC3-208ENST00000583649 SREBF1P36956 1147 aa12.53□□□□□ -0.4
CASC3-208ENST00000583649 OR1G1P47890 313 aa12.53□□□□□ -0.4
CASC3-208ENST00000583649 ADCY7P51828 1080 aa12.53□□□□□ -0.4
CASC3-208ENST00000583649 PARM1Q6UWI2 310 aa12.53□□□□□ -0.4
CASC3-208ENST00000583649 SYNE3Q6ZMZ3 975 aa12.53□□□□□ -0.4
CASC3-208ENST00000583649 TPRG1Q6ZUI0 275 aa12.53□□□□□ -0.4
CASC3-208ENST00000583649 CATSPER4Q7RTX7 472 aa12.53□□□□□ -0.4
CASC3-208ENST00000583649 PALB2Q86YC2 1186 aa12.53□□□□□ -0.4
CASC3-208ENST00000583649 GPR65Q8IYL9 337 aa12.53□□□□□ -0.4
CASC3-208ENST00000583649 SRBD1Q8N5C6 995 aaKnown RBP12.53□□□□□ -0.4
CASC3-208ENST00000583649 CNNM3Q8NE01 707 aa12.53□□□□□ -0.4
CASC3-208ENST00000583649 JPH2Q9BR39 696 aaPredicted RBP12.53□□□□□ -0.4
CASC3-208ENST00000583649 COLEC11Q9BWP8 271 aa12.53□□□□□ -0.4
CASC3-208ENST00000583649 VN1R3Q9BXE9 311 aa12.53□□□□□ -0.4
CASC3-208ENST00000583649 ANO3Q9BYT9 981 aa12.53□□□□□ -0.4
CASC3-208ENST00000583649 RIC8AQ9NPQ8 531 aa12.53□□□□□ -0.4
CASC3-208ENST00000583649 BAHCC1Q9P281 2608 aa12.53□□□□□ -0.4
CASC3-208ENST00000583649 MAP1BP46821 2468 aaKnown RBP12.52□□□□□ -0.4
CASC3-208ENST00000583649 hCG_1984214I3L0E3 225 aa12.52□□□□□ -0.41
CASC3-208ENST00000583649 HNRNPA1P09651 372 aaKnown RBP eCLIP12.52□□□□□ -0.41
CASC3-208ENST00000583649 PMLP29590 882 aa12.52□□□□□ -0.41
CASC3-208ENST00000583649 DSG1Q02413 1049 aa12.52□□□□□ -0.41
CASC3-208ENST00000583649 NCBP1Q09161 790 aaKnown RBP12.52□□□□□ -0.41
CASC3-208ENST00000583649 SIM2Q14190 667 aaPredicted RBP12.52□□□□□ -0.41
CASC3-208ENST00000583649 LPAL2Q16609 132 aa12.52□□□□□ -0.41
CASC3-208ENST00000583649 AASDHQ4L235 1098 aaPredicted RBP12.52□□□□□ -0.41
CASC3-208ENST00000583649 TSSK4Q6SA08 328 aa12.52□□□□□ -0.41
CASC3-208ENST00000583649 MAMSTRQ6ZN01 415 aa12.52□□□□□ -0.41
CASC3-208ENST00000583649 ZNF280BQ86YH2 543 aa12.52□□□□□ -0.41
CASC3-208ENST00000583649 ZNF713Q8N859 430 aaPredicted RBP12.52□□□□□ -0.41
CASC3-208ENST00000583649 C12orf50Q8NA57 414 aaPredicted RBP12.52□□□□□ -0.41
CASC3-208ENST00000583649 FEZF2Q8TBJ5 459 aa12.52□□□□□ -0.41
CASC3-208ENST00000583649 IGDCC4Q8TDY8 1250 aa12.52□□□□□ -0.41
CASC3-208ENST00000583649 FGF14Q92915 247 aa12.52□□□□□ -0.41
CASC3-208ENST00000583649 ZNF707Q96C28 371 aaPredicted RBP12.52□□□□□ -0.41
CASC3-208ENST00000583649 ZNF668Q96K58 619 aaPredicted RBP12.52□□□□□ -0.41
CASC3-208ENST00000583649 LNPKQ9C0E8 428 aa12.52□□□□□ -0.41
CASC3-208ENST00000583649 SENP2Q9HC62 589 aa12.52□□□□□ -0.41
CASC3-208ENST00000583649 FNIP2Q9P278 1114 aa12.52□□□□□ -0.41
CASC3-208ENST00000583649 MTF2Q9Y483 593 aaPredicted RBP12.52□□□□□ -0.41
CASC3-208ENST00000583649 PCDHB2Q9Y5E7 798 aa12.52□□□□□ -0.41
CASC3-208ENST00000583649 SLC12A7Q9Y666 1083 aa12.52□□□□□ -0.41
CASC3-208ENST00000583649 MIA3Q5JRA6 1907 aa12.52□□□□□ -0.41
CASC3-208ENST00000583649 C2orf16Q68DN1 1984 aa12.51□□□□□ -0.41
CASC3-208ENST00000583649 E7EWF7 191 aa12.51□□□□□ -0.41
CASC3-208ENST00000583649 TGM5O43548 720 aa12.51□□□□□ -0.41
CASC3-208ENST00000583649 ZMYND10O75800 440 aa12.51□□□□□ -0.41
CASC3-208ENST00000583649 PLEKHA8P1O95397 391 aa12.51□□□□□ -0.41
CASC3-208ENST00000583649 SPATA31D3P0C874 917 aa12.51□□□□□ -0.41
CASC3-208ENST00000583649 MYBP10242 640 aa12.51□□□□□ -0.41
CASC3-208ENST00000583649 USP41Q3LFD5 358 aa12.51□□□□□ -0.41
CASC3-208ENST00000583649 PPM1LQ5SGD2 360 aa12.51□□□□□ -0.41
CASC3-208ENST00000583649 SPATA31D4Q6ZUB0 917 aa12.51□□□□□ -0.41
CASC3-208ENST00000583649 HACE1Q8IYU2 909 aa12.51□□□□□ -0.41
CASC3-208ENST00000583649 CCDC82Q8N4S0 544 aa12.51□□□□□ -0.41
CASC3-208ENST00000583649 LINC01465Q8N7H1 131 aa12.51□□□□□ -0.41
CASC3-208ENST00000583649 TMEM87BQ96K49 555 aa12.51□□□□□ -0.41
CASC3-208ENST00000583649 RALYQ9UKM9 306 aaKnown RBP12.51□□□□□ -0.41
CASC3-208ENST00000583649 PRG3Q9Y2Y8 225 aaPredicted RBP12.51□□□□□ -0.41
CASC3-208ENST00000583649 CHD8Q9HCK8 2581 aa12.51□□□□□ -0.41
CASC3-208ENST00000583649 EVPLQ92817 2033 aa12.5□□□□□ -0.41
CASC3-208ENST00000583649 CACNA1IQ9P0X4 2223 aa12.5□□□□□ -0.41
CASC3-208ENST00000583649 A0A087WZ62 844 aa12.5□□□□□ -0.41
CASC3-208ENST00000583649 TMEM8BA6NDV4 472 aa12.5□□□□□ -0.41
CASC3-208ENST00000583649 SOBPA7XYQ1 873 aa12.5□□□□□ -0.41
CASC3-208ENST00000583649 DDHD2O94830 711 aa12.5□□□□□ -0.41
CASC3-208ENST00000583649 POMCP01189 267 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms