RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 PCDHA6Q9UN73 950 aa10.92□□□□□ -0.66
MKS1-212ENST00000583577 PLAGL2Q9UPG8 496 aa10.92□□□□□ -0.66
MKS1-212ENST00000583577 PCDHA8Q9Y5H6 950 aa10.92□□□□□ -0.66
MKS1-212ENST00000583577 MAST4O15021 2626 aa10.92□□□□□ -0.66
MKS1-212ENST00000583577 MYH9P35579 1960 aaKnown RBP10.92□□□□□ -0.66
MKS1-212ENST00000583577 FRMPD4Q14CM0 1322 aa10.91□□□□□ -0.66
MKS1-212ENST00000583577 ADGRA3Q8IWK6 1321 aa10.91□□□□□ -0.66
MKS1-212ENST00000583577 A0A1B0GTH6 734 aa10.91□□□□□ -0.66
MKS1-212ENST00000583577 PER2O15055 1255 aa10.91□□□□□ -0.66
MKS1-212ENST00000583577 PI15O43692 258 aa10.91□□□□□ -0.66
MKS1-212ENST00000583577 EIF3JO75822 258 aaKnown RBP10.91□□□□□ -0.66
MKS1-212ENST00000583577 ARIH2O95376 493 aa10.91□□□□□ -0.66
MKS1-212ENST00000583577 CCDC175P0C221 793 aa10.91□□□□□ -0.66
MKS1-212ENST00000583577 SLFN14P0C7P3 912 aa10.91□□□□□ -0.66
MKS1-212ENST00000583577 CDK11BP21127 795 aaKnown RBP10.91□□□□□ -0.66
MKS1-212ENST00000583577 FECHP22830 423 aa10.91□□□□□ -0.66
MKS1-212ENST00000583577 MARCKSP29966 332 aaPredicted RBP10.91□□□□□ -0.66
MKS1-212ENST00000583577 CASQ1P31415 396 aa10.91□□□□□ -0.66
MKS1-212ENST00000583577 PPP1R2P41236 205 aa10.91□□□□□ -0.66
MKS1-212ENST00000583577 AP3B2Q13367 1082 aa10.91□□□□□ -0.66
MKS1-212ENST00000583577 TERF2Q15554 542 aa10.91□□□□□ -0.66
MKS1-212ENST00000583577 LONRF3Q496Y0 759 aa10.91□□□□□ -0.66
MKS1-212ENST00000583577 SPATA1Q5VX52 437 aa10.91□□□□□ -0.66
MKS1-212ENST00000583577 XRRA1Q6P2D8 792 aa10.91□□□□□ -0.66
MKS1-212ENST00000583577 FBXO38Q6PIJ6 1188 aa10.91□□□□□ -0.66
MKS1-212ENST00000583577 TRIM65Q6PJ69 517 aa10.91□□□□□ -0.66
MKS1-212ENST00000583577 CNGA4Q8IV77 575 aa10.91□□□□□ -0.66
MKS1-212ENST00000583577 REXO1L1PQ8IX06 675 aa10.91□□□□□ -0.66
MKS1-212ENST00000583577 DHX37Q8IY37 1157 aaKnown RBP10.91□□□□□ -0.66
MKS1-212ENST00000583577 CCDC105Q8IYK2 499 aa10.91□□□□□ -0.66
MKS1-212ENST00000583577 REXO1Q8N1G1 1221 aaKnown RBP10.91□□□□□ -0.66
MKS1-212ENST00000583577 ANKRD20A12PQ8NF67 263 aa10.91□□□□□ -0.66
MKS1-212ENST00000583577 RABGGTAQ92696 567 aa10.91□□□□□ -0.66
MKS1-212ENST00000583577 AIFM3Q96NN9 605 aa10.91□□□□□ -0.66
MKS1-212ENST00000583577 APOL5Q9BWW9 433 aa10.91□□□□□ -0.66
MKS1-212ENST00000583577 OSBPL7Q9BZF2 842 aa10.91□□□□□ -0.66
MKS1-212ENST00000583577 SEMA4AQ9H3S1 761 aa10.91□□□□□ -0.66
MKS1-212ENST00000583577 TLE6Q9H808 572 aa10.91□□□□□ -0.66
MKS1-212ENST00000583577 RMND1Q9NWS8 449 aa10.91□□□□□ -0.66
MKS1-212ENST00000583577 MAN1B1Q9UKM7 699 aa10.91□□□□□ -0.66
MKS1-212ENST00000583577 PPP2R2CQ9Y2T4 447 aa10.91□□□□□ -0.66
MKS1-212ENST00000583577 AKR1B15C9JRZ8 316 aaPredicted RBP10.9□□□□□ -0.66
MKS1-212ENST00000583577 BIN1O00499 593 aa10.9□□□□□ -0.66
MKS1-212ENST00000583577 TADA3O75528 432 aa10.9□□□□□ -0.66
MKS1-212ENST00000583577 STAM2O75886 525 aa10.9□□□□□ -0.66
MKS1-212ENST00000583577 ITGB1P05556 798 aa10.9□□□□□ -0.66
MKS1-212ENST00000583577 KRT2P35908 639 aa10.9□□□□□ -0.66
MKS1-212ENST00000583577 CLK2P49760 499 aaKnown RBP10.9□□□□□ -0.66
MKS1-212ENST00000583577 GPS2Q13227 327 aa10.9□□□□□ -0.66
MKS1-212ENST00000583577 PNOCQ13519 176 aa10.9□□□□□ -0.66
MKS1-212ENST00000583577 BTG3Q14201 252 aaPredicted RBP10.9□□□□□ -0.66
MKS1-212ENST00000583577 MFSD10Q14728 455 aa10.9□□□□□ -0.66
MKS1-212ENST00000583577 NR1I3Q14994 352 aa10.9□□□□□ -0.66
MKS1-212ENST00000583577 BRD3Q15059 726 aa10.9□□□□□ -0.66
MKS1-212ENST00000583577 ELF2Q15723 593 aa10.9□□□□□ -0.66
MKS1-212ENST00000583577 KIAA0753Q2KHM9 967 aa10.9□□□□□ -0.66
MKS1-212ENST00000583577 KIAA0319Q5VV43 1072 aa10.9□□□□□ -0.66
MKS1-212ENST00000583577 PCNX4Q63HM2 1172 aa10.9□□□□□ -0.66
MKS1-212ENST00000583577 GALNT17Q6IS24 598 aa10.9□□□□□ -0.66
MKS1-212ENST00000583577 SEPT14Q6ZU15 432 aa10.9□□□□□ -0.66
MKS1-212ENST00000583577 VSIG10LQ86VR7 867 aa10.9□□□□□ -0.66
MKS1-212ENST00000583577 TMEM139Q8IV31 216 aa10.9□□□□□ -0.66
MKS1-212ENST00000583577 CEP112Q8N8E3 955 aa10.9□□□□□ -0.66
MKS1-212ENST00000583577 DTWD2Q8NBA8 298 aa10.9□□□□□ -0.66
MKS1-212ENST00000583577 IL31RAQ8NI17 732 aa10.9□□□□□ -0.66
MKS1-212ENST00000583577 RUBCNQ92622 972 aa10.9□□□□□ -0.66
MKS1-212ENST00000583577 CLP1Q92989 425 aaKnown RBP10.9□□□□□ -0.66
MKS1-212ENST00000583577 IQCDQ96DY2 449 aa10.9□□□□□ -0.66
MKS1-212ENST00000583577 PLVAPQ9BX97 442 aa10.9□□□□□ -0.66
MKS1-212ENST00000583577 ANO3Q9BYT9 981 aa10.9□□□□□ -0.66
MKS1-212ENST00000583577 FANCLQ9NW38 375 aa10.9□□□□□ -0.66
MKS1-212ENST00000583577 NFE2L3Q9Y4A8 694 aa10.9□□□□□ -0.66
MKS1-212ENST00000583577 DSPP15924 2871 aaKnown RBP10.9□□□□□ -0.67
MKS1-212ENST00000583577 IGF2RP11717 2491 aa10.9□□□□□ -0.67
MKS1-212ENST00000583577 LOXHD1Q8IVV2 1947 aa10.9□□□□□ -0.67
MKS1-212ENST00000583577 NAV2Q8IVL1 2488 aa10.89□□□□□ -0.67
MKS1-212ENST00000583577 LRRC10BA6NIK2 292 aa10.89□□□□□ -0.67
MKS1-212ENST00000583577 ZRANB2O95218 330 aaKnown RBP eCLIP10.89□□□□□ -0.67
MKS1-212ENST00000583577 ASGR2P07307 311 aa10.89□□□□□ -0.67
MKS1-212ENST00000583577 CTSHP09668 335 aa10.89□□□□□ -0.67
MKS1-212ENST00000583577 ZNF286BP0CG31 522 aa10.89□□□□□ -0.67
MKS1-212ENST00000583577 ATXN1P54253 815 aaKnown RBP10.89□□□□□ -0.67
MKS1-212ENST00000583577 LY6KQ17RY6 165 aa10.89□□□□□ -0.67
MKS1-212ENST00000583577 GNPTABQ3T906 1256 aa10.89□□□□□ -0.67
MKS1-212ENST00000583577 ARL6IP4Q66PJ3 421 aaKnown RBP10.89□□□□□ -0.67
MKS1-212ENST00000583577 CWF19L1Q69YN2 538 aaKnown RBP10.89□□□□□ -0.67
MKS1-212ENST00000583577 KCNV1Q6PIU1 500 aa10.89□□□□□ -0.67
MKS1-212ENST00000583577 ZNF771Q7L3S4 317 aaPredicted RBP10.89□□□□□ -0.67
MKS1-212ENST00000583577 NLRX1Q86UT6 975 aa10.89□□□□□ -0.67
MKS1-212ENST00000583577 PPFIBP1Q86W92 1011 aa10.89□□□□□ -0.67
MKS1-212ENST00000583577 BLIDQ8IZY5 108 aa10.89□□□□□ -0.67
MKS1-212ENST00000583577 DAGLBQ8NCG7 672 aa10.89□□□□□ -0.67
MKS1-212ENST00000583577 SPPL3Q8TCT6 385 aa10.89□□□□□ -0.67
MKS1-212ENST00000583577 MICAL1Q8TDZ2 1067 aa10.89□□□□□ -0.67
MKS1-212ENST00000583577 POF1BQ8WVV4 589 aa10.89□□□□□ -0.67
MKS1-212ENST00000583577 HNRNPLLQ8WVV9 542 aaKnown RBP10.89□□□□□ -0.67
MKS1-212ENST00000583577 PHF20Q9BVI0 1012 aa10.89□□□□□ -0.67
MKS1-212ENST00000583577 GBP3Q9H0R5 595 aa10.89□□□□□ -0.67
MKS1-212ENST00000583577 TMEM260Q9NX78 707 aa10.89□□□□□ -0.67
MKS1-212ENST00000583577 CALCOCO1Q9P1Z2 691 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms