RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 SH2D3AQ9BRG2 576 aa13.82□□□□□ -0.2
TOP3A-215ENST00000583328 TMEM175Q9BSA9 504 aa13.82□□□□□ -0.2
TOP3A-215ENST00000583328 ESYT1Q9BSJ8 1104 aa13.82□□□□□ -0.2
TOP3A-215ENST00000583328 NIFKQ9BYG3 293 aaKnown RBP13.82□□□□□ -0.2
TOP3A-215ENST00000583328 UNC45AQ9H3U1 944 aa13.82□□□□□ -0.2
TOP3A-215ENST00000583328 RSAD1Q9HA92 442 aa13.82□□□□□ -0.2
TOP3A-215ENST00000583328 PIDD1Q9HB75 910 aa13.82□□□□□ -0.2
TOP3A-215ENST00000583328 KANSL3Q9P2N6 904 aa13.82□□□□□ -0.2
TOP3A-215ENST00000583328 PCDHB2Q9Y5E7 798 aa13.82□□□□□ -0.2
TOP3A-215ENST00000583328 CLUHO75153 1309 aa13.82□□□□□ -0.2
TOP3A-215ENST00000583328 IGKV6-21A0A0C4DH24 114 aa13.81□□□□□ -0.2
TOP3A-215ENST00000583328 DDX11L8A8MPP1 907 aa13.81□□□□□ -0.2
TOP3A-215ENST00000583328 GLUD1P00367 558 aa13.81□□□□□ -0.2
TOP3A-215ENST00000583328 LRCH2Q5VUJ6 765 aa13.81□□□□□ -0.2
TOP3A-215ENST00000583328 PHLDB3Q6NSJ2 640 aa13.81□□□□□ -0.2
TOP3A-215ENST00000583328 AGMOQ6ZNB7 445 aa13.81□□□□□ -0.2
TOP3A-215ENST00000583328 BICD2Q8TD16 824 aa13.81□□□□□ -0.2
TOP3A-215ENST00000583328 GPR152Q8TDT2 470 aa13.81□□□□□ -0.2
TOP3A-215ENST00000583328 RPS6KC1Q96S38 1066 aa13.81□□□□□ -0.2
TOP3A-215ENST00000583328 PRG3Q9Y2Y8 225 aaPredicted RBP13.81□□□□□ -0.2
TOP3A-215ENST00000583328 CCDC196A0A1B0GTZ2 297 aa13.8□□□□□ -0.2
TOP3A-215ENST00000583328 TMEM150BA6NC51 233 aa13.8□□□□□ -0.2
TOP3A-215ENST00000583328 TEX28O15482 410 aa13.8□□□□□ -0.2
TOP3A-215ENST00000583328 RFPL2O75678 378 aa13.8□□□□□ -0.2
TOP3A-215ENST00000583328 POMCP01189 267 aa13.8□□□□□ -0.2
TOP3A-215ENST00000583328 OR1G1P47890 313 aa13.8□□□□□ -0.2
TOP3A-215ENST00000583328 AFF1P51825 1210 aaKnown RBP13.8□□□□□ -0.2
TOP3A-215ENST00000583328 BMP2KLQ5H9B9 411 aa13.8□□□□□ -0.2
TOP3A-215ENST00000583328 DCLRE1AQ6PJP8 1040 aa13.8□□□□□ -0.2
TOP3A-215ENST00000583328 TAS1R1Q7RTX1 841 aa13.8□□□□□ -0.2
TOP3A-215ENST00000583328 MRPL10Q7Z7H8 261 aaKnown RBP13.8□□□□□ -0.2
TOP3A-215ENST00000583328 KSR1Q8IVT5 923 aa13.8□□□□□ -0.2
TOP3A-215ENST00000583328 RDM1Q8NG50 284 aa13.8□□□□□ -0.2
TOP3A-215ENST00000583328 SLC5A5Q92911 643 aa13.8□□□□□ -0.2
TOP3A-215ENST00000583328 GJA10Q969M2 543 aa13.8□□□□□ -0.2
TOP3A-215ENST00000583328 CEP89Q96ST8 783 aa13.8□□□□□ -0.2
TOP3A-215ENST00000583328 HERC2P3Q9BVR0 1158 aa13.8□□□□□ -0.2
TOP3A-215ENST00000583328 RHOBTB2Q9BYZ6 727 aa13.8□□□□□ -0.2
TOP3A-215ENST00000583328 ARHGEF3Q9NR81 526 aa13.8□□□□□ -0.2
TOP3A-215ENST00000583328 GTF3C3Q9Y5Q9 886 aa13.8□□□□□ -0.2
TOP3A-215ENST00000583328 MYH9P35579 1960 aaKnown RBP13.8□□□□□ -0.2
TOP3A-215ENST00000583328 DCHS1Q96JQ0 3298 aa13.79□□□□□ -0.2
TOP3A-215ENST00000583328 MAFO75444 373 aaPredicted RBP13.79□□□□□ -0.2
TOP3A-215ENST00000583328 SPATA31D3P0C874 917 aa13.79□□□□□ -0.2
TOP3A-215ENST00000583328 LAMP2P13473 410 aa13.79□□□□□ -0.2
TOP3A-215ENST00000583328 USP11P51784 963 aa13.79□□□□□ -0.2
TOP3A-215ENST00000583328 RCAN1P53805 252 aa13.79□□□□□ -0.2
TOP3A-215ENST00000583328 FGD1P98174 961 aa13.79□□□□□ -0.2
TOP3A-215ENST00000583328 AKAP17AQ02040 695 aaKnown RBP13.79□□□□□ -0.2
TOP3A-215ENST00000583328 SPATA31D4Q6ZUB0 917 aa13.79□□□□□ -0.2
TOP3A-215ENST00000583328 JPH2Q9BR39 696 aaPredicted RBP13.79□□□□□ -0.2
TOP3A-215ENST00000583328 NT5C3AQ9H0P0 336 aa13.79□□□□□ -0.2
TOP3A-215ENST00000583328 AGPAT5Q9NUQ2 364 aa13.79□□□□□ -0.2
TOP3A-215ENST00000583328 DLL3Q9NYJ7 618 aa13.79□□□□□ -0.2
TOP3A-215ENST00000583328 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.79□□□□□ -0.2
TOP3A-215ENST00000583328 DLGAP2Q9P1A6 1054 aa13.79□□□□□ -0.2
TOP3A-215ENST00000583328 CNTNAP2Q9UHC6 1331 aa13.79□□□□□ -0.2
TOP3A-215ENST00000583328 VPS13AQ96RL7 3174 aa13.79□□□□□ -0.2
TOP3A-215ENST00000583328 PRPF3O43395 683 aaKnown RBP13.78□□□□□ -0.2
TOP3A-215ENST00000583328 EDIL3O43854 480 aa13.78□□□□□ -0.2
TOP3A-215ENST00000583328 GAS2O43903 313 aaKnown RBP13.78□□□□□ -0.2
TOP3A-215ENST00000583328 KINO60870 393 aaKnown RBP13.78□□□□□ -0.2
TOP3A-215ENST00000583328 STBD1O95210 358 aa13.78□□□□□ -0.2
TOP3A-215ENST00000583328 GLUD2P49448 558 aa13.78□□□□□ -0.2
TOP3A-215ENST00000583328 RSPO4Q2I0M5 234 aaPredicted RBP13.78□□□□□ -0.2
TOP3A-215ENST00000583328 KIAA0319Q5VV43 1072 aa13.78□□□□□ -0.2
TOP3A-215ENST00000583328 GET4Q7L5D6 327 aaPredicted RBP13.78□□□□□ -0.2
TOP3A-215ENST00000583328 PALB2Q86YC2 1186 aa13.78□□□□□ -0.2
TOP3A-215ENST00000583328 ST13P5Q8NFI4 369 aaPredicted RBP13.78□□□□□ -0.2
TOP3A-215ENST00000583328 HDAC7Q8WUI4 952 aa13.78□□□□□ -0.2
TOP3A-215ENST00000583328 ZNF707Q96C28 371 aaPredicted RBP13.78□□□□□ -0.2
TOP3A-215ENST00000583328 FOXQ1Q9C009 403 aa13.78□□□□□ -0.2
TOP3A-215ENST00000583328 PLEKHA4Q9H4M7 779 aa13.78□□□□□ -0.2
TOP3A-215ENST00000583328 RXFP1Q9HBX9 757 aa13.78□□□□□ -0.2
TOP3A-215ENST00000583328 UBN1Q9NPG3 1134 aa13.78□□□□□ -0.2
TOP3A-215ENST00000583328 MARCH5Q9NX47 278 aa13.78□□□□□ -0.2
TOP3A-215ENST00000583328 NR1I2O75469 434 aa13.77□□□□□ -0.21
TOP3A-215ENST00000583328 PSMD10O75832 226 aa13.77□□□□□ -0.21
TOP3A-215ENST00000583328 SRGAP2CP0DJJ0 459 aa13.77□□□□□ -0.21
TOP3A-215ENST00000583328 ITGA4P13612 1032 aa13.77□□□□□ -0.21
TOP3A-215ENST00000583328 ADCK5Q3MIX3 580 aa13.77□□□□□ -0.21
TOP3A-215ENST00000583328 UBXN11Q5T124 520 aa13.77□□□□□ -0.21
TOP3A-215ENST00000583328 SRGAP1Q7Z6B7 1085 aa13.77□□□□□ -0.21
TOP3A-215ENST00000583328 COLGALT2Q8IYK4 626 aa13.77□□□□□ -0.21
TOP3A-215ENST00000583328 CCDC148Q8NFR7 591 aa13.77□□□□□ -0.21
TOP3A-215ENST00000583328 PJA1Q8NG27 643 aa13.77□□□□□ -0.21
TOP3A-215ENST00000583328 PHKBQ93100 1093 aa13.77□□□□□ -0.21
TOP3A-215ENST00000583328 SHDQ96IW2 340 aa13.77□□□□□ -0.21
TOP3A-215ENST00000583328 CNTNAP3BQ96NU0 1288 aa13.77□□□□□ -0.21
TOP3A-215ENST00000583328 CNTNAP3Q9BZ76 1288 aa13.77□□□□□ -0.21
TOP3A-215ENST00000583328 IFT122Q9HBG6 1241 aa13.77□□□□□ -0.21
TOP3A-215ENST00000583328 SLC2A4RGQ9NR83 387 aa13.77□□□□□ -0.21
TOP3A-215ENST00000583328 COL4A3BPQ9Y5P4 624 aa13.77□□□□□ -0.21
TOP3A-215ENST00000583328 NUMBLQ9Y6R0 609 aa13.77□□□□□ -0.21
TOP3A-215ENST00000583328 NCOR2Q9Y618 2525 aa13.77□□□□□ -0.21
TOP3A-215ENST00000583328 POTEMA6NI47 508 aa13.76□□□□□ -0.21
TOP3A-215ENST00000583328 ANHXE9PGG2 379 aa13.76□□□□□ -0.21
TOP3A-215ENST00000583328 LRRN2O75325 713 aa13.76□□□□□ -0.21
TOP3A-215ENST00000583328 KRT37O76014 449 aa13.76□□□□□ -0.21
TOP3A-215ENST00000583328 GLULP15104 373 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms