RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 DZANK1Q9NVP4 752 aa9.74□□□□□ -0.85
PDLIM1P3-201ENST00000582370 CCDC39Q9UFE4 941 aa9.74□□□□□ -0.85
PDLIM1P3-201ENST00000582370 HOOK1Q9UJC3 728 aaKnown RBP9.74□□□□□ -0.85
PDLIM1P3-201ENST00000582370 PCDHB7Q9Y5E2 793 aa9.74□□□□□ -0.85
PDLIM1P3-201ENST00000582370 TRPV2Q9Y5S1 764 aa9.74□□□□□ -0.85
PDLIM1P3-201ENST00000582370 KDM3AQ9Y4C1 1321 aa9.74□□□□□ -0.85
PDLIM1P3-201ENST00000582370 ASPMQ8IZT6 3477 aa9.74□□□□□ -0.85
PDLIM1P3-201ENST00000582370 TBKBP1A7MCY6 615 aa9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 PRR5-ARHGAP8B1AHC4 643 aa9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 FAM86B1E9PN63 330 aa9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 GAS7O60861 476 aa9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 KINO60870 393 aaKnown RBP9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 FAM86B2P0C5J1 330 aa9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 ITGB5P18084 799 aa9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 ATP2B1P20020 1258 aa9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 RFX1P22670 979 aa9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 CMA1P23946 247 aa9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 SLC26A2P50443 739 aa9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 ATXN1P54253 815 aaKnown RBP9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 MRPS9P82933 396 aaKnown RBP9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 ARHGAP8P85298 464 aa9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 SEMA3FQ13275 785 aa9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 PPP2R5CQ13362 524 aa9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 SMC1AQ14683 1233 aaKnown RBP9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 GRIK4Q16099 956 aa9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 EARS2Q5JPH6 523 aaKnown RBP9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 ATAT1Q5SQI0 421 aa9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 LRCH2Q5VUJ6 765 aa9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 FOXD4L5Q5VV16 416 aaPredicted RBP9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 KRT79Q5XKE5 535 aa9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 ZNF746Q6NUN9 644 aaPredicted RBP9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 KANK3Q6NY19 840 aa9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 TMC7Q7Z402 723 aa9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 IGSF22Q8N9C0 903 aa9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 SUMF1Q8NBK3 374 aa9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 ETNPPLQ8TBG4 499 aa9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 FOXD4L4Q8WXT5 416 aaPredicted RBP9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 RIN2Q8WYP3 895 aaPredicted RBP9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 SYAP1Q96A49 352 aaPredicted RBP9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 LRRC27Q9C0I9 530 aa9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 BCAS3Q9H6U6 928 aa9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 CWH43Q9H720 699 aa9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 TTC12Q9H892 705 aaPredicted RBP9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 MAGEF1Q9HAY2 307 aa9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 AGO4Q9HCK5 861 aaKnown RBP9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 C1orf112Q9NSG2 853 aa9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 TYW1Q9NV66 732 aaKnown RBP9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 ERAP1Q9NZ08 941 aa9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 TFIP11Q9UBB9 837 aaKnown RBP9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 CDV3Q9UKY7 258 aaKnown RBP9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 CLIC4Q9Y696 253 aa9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 MYH9P35579 1960 aaKnown RBP9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 EVPLQ92817 2033 aa9.73□□□□□ -0.85
PDLIM1P3-201ENST00000582370 DOCK8Q8NF50 2099 aa9.72□□□□□ -0.85
PDLIM1P3-201ENST00000582370 WDR64B1ANS9 1081 aa9.72□□□□□ -0.85
PDLIM1P3-201ENST00000582370 MSH4O15457 936 aa9.72□□□□□ -0.85
PDLIM1P3-201ENST00000582370 TDP2O95551 362 aa9.72□□□□□ -0.85
PDLIM1P3-201ENST00000582370 MYL1P05976 194 aa9.72□□□□□ -0.85
PDLIM1P3-201ENST00000582370 SP9P0CG40 484 aa9.72□□□□□ -0.85
PDLIM1P3-201ENST00000582370 ARP10275 920 aa9.72□□□□□ -0.85
PDLIM1P3-201ENST00000582370 XRCC6P12956 609 aaKnown RBP eCLIP9.72□□□□□ -0.85
PDLIM1P3-201ENST00000582370 MCM4P33991 863 aa9.72□□□□□ -0.85
PDLIM1P3-201ENST00000582370 UBA7P41226 1012 aa9.72□□□□□ -0.85
PDLIM1P3-201ENST00000582370 LMNB2Q03252 620 aa9.72□□□□□ -0.85
PDLIM1P3-201ENST00000582370 KRT17Q04695 432 aa9.72□□□□□ -0.85
PDLIM1P3-201ENST00000582370 COL9A2Q14055 689 aaPredicted RBP9.72□□□□□ -0.85
PDLIM1P3-201ENST00000582370 MARCH8Q5T0T0 291 aa9.72□□□□□ -0.85
PDLIM1P3-201ENST00000582370 RARS2Q5T160 578 aaKnown RBP9.72□□□□□ -0.85
PDLIM1P3-201ENST00000582370 CCDC73Q6ZRK6 1079 aa9.72□□□□□ -0.85
PDLIM1P3-201ENST00000582370 CCDC149Q6ZUS6 474 aa9.72□□□□□ -0.85
PDLIM1P3-201ENST00000582370 OTOP3Q7RTS5 596 aa9.72□□□□□ -0.85
PDLIM1P3-201ENST00000582370 POTEDQ86YR6 584 aa9.72□□□□□ -0.85
PDLIM1P3-201ENST00000582370 ELOA2Q8IYF1 753 aaPredicted RBP9.72□□□□□ -0.85
PDLIM1P3-201ENST00000582370 EXOC8Q8IYI6 725 aa9.72□□□□□ -0.85
PDLIM1P3-201ENST00000582370 C4orf32Q8N8J7 132 aa9.72□□□□□ -0.85
PDLIM1P3-201ENST00000582370 LENG9Q96B70 501 aa9.72□□□□□ -0.85
PDLIM1P3-201ENST00000582370 CALML4Q96GE6 196 aa9.72□□□□□ -0.85
PDLIM1P3-201ENST00000582370 RTKNQ9BST9 563 aa9.72□□□□□ -0.85
PDLIM1P3-201ENST00000582370 CCSER1Q9C0I3 900 aa9.72□□□□□ -0.85
PDLIM1P3-201ENST00000582370 JPH1Q9HDC5 661 aaPredicted RBP9.72□□□□□ -0.85
PDLIM1P3-201ENST00000582370 NCDNQ9UBB6 729 aa9.72□□□□□ -0.85
PDLIM1P3-201ENST00000582370 WNT16Q9UBV4 365 aa9.72□□□□□ -0.85
PDLIM1P3-201ENST00000582370 LRWD1Q9UFC0 647 aa9.72□□□□□ -0.85
PDLIM1P3-201ENST00000582370 PPME1Q9Y570 386 aa9.72□□□□□ -0.85
PDLIM1P3-201ENST00000582370 WDR81Q562E7 1941 aa9.72□□□□□ -0.85
PDLIM1P3-201ENST00000582370 GPR179Q6PRD1 2367 aa9.71□□□□□ -0.85
PDLIM1P3-201ENST00000582370 FAM237AA0A1B0GTK4 181 aa9.71□□□□□ -0.86
PDLIM1P3-201ENST00000582370 FAM205CA6NFA0 338 aa9.71□□□□□ -0.86
PDLIM1P3-201ENST00000582370 C2orf71A6NGG8 1288 aa9.71□□□□□ -0.86
PDLIM1P3-201ENST00000582370 RRN3P2A6NIE6 340 aa9.71□□□□□ -0.86
PDLIM1P3-201ENST00000582370 STK25O00506 426 aa9.71□□□□□ -0.86
PDLIM1P3-201ENST00000582370 SPTLC1O15269 473 aa9.71□□□□□ -0.86
PDLIM1P3-201ENST00000582370 DTNBO60941 627 aa9.71□□□□□ -0.86
PDLIM1P3-201ENST00000582370 PSMD10O75832 226 aa9.71□□□□□ -0.86
PDLIM1P3-201ENST00000582370 WEE2P0C1S8 567 aa9.71□□□□□ -0.86
PDLIM1P3-201ENST00000582370 TCF7P36402 384 aaPredicted RBP9.71□□□□□ -0.86
PDLIM1P3-201ENST00000582370 TXKP42681 527 aa9.71□□□□□ -0.86
PDLIM1P3-201ENST00000582370 CEBPZQ03701 1054 aaKnown RBP9.71□□□□□ -0.86
PDLIM1P3-201ENST00000582370 ODR4Q5SWX8 454 aa9.71□□□□□ -0.86
PDLIM1P3-201ENST00000582370 FAM173BQ6P4H8 233 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms