RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 MRPS5P82675 430 aaKnown RBP10.82□□□□□ -0.68
TOP3A-211ENST00000581536 PUS10Q3MIT2 529 aaKnown RBP10.82□□□□□ -0.68
TOP3A-211ENST00000581536 MCTP1Q6DN14 999 aa10.82□□□□□ -0.68
TOP3A-211ENST00000581536 SCUBE3Q8IX30 993 aa10.82□□□□□ -0.68
TOP3A-211ENST00000581536 RNF169Q8NCN4 708 aa10.82□□□□□ -0.68
TOP3A-211ENST00000581536 SPPL3Q8TCT6 385 aa10.82□□□□□ -0.68
TOP3A-211ENST00000581536 SPIRE2Q8WWL2 714 aa10.82□□□□□ -0.68
TOP3A-211ENST00000581536 ATXN2LQ8WWM7 1075 aaKnown RBP10.82□□□□□ -0.68
TOP3A-211ENST00000581536 SLC7A3Q8WY07 619 aa10.82□□□□□ -0.68
TOP3A-211ENST00000581536 LPPQ93052 612 aa10.82□□□□□ -0.68
TOP3A-211ENST00000581536 MRPL38Q96DV4 380 aaKnown RBP10.82□□□□□ -0.68
TOP3A-211ENST00000581536 CWH43Q9H720 699 aa10.82□□□□□ -0.68
TOP3A-211ENST00000581536 ATP6V0A4Q9HBG4 840 aa10.82□□□□□ -0.68
TOP3A-211ENST00000581536 COL4A3BPQ9Y5P4 624 aa10.82□□□□□ -0.68
TOP3A-211ENST00000581536 TRIP11Q15643 1979 aa10.82□□□□□ -0.68
TOP3A-211ENST00000581536 MUC3AQ02505 3323 aa10.82□□□□□ -0.68
TOP3A-211ENST00000581536 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.81□□□□□ -0.68
TOP3A-211ENST00000581536 A0A0U1RQF3 1178 aa10.81□□□□□ -0.68
TOP3A-211ENST00000581536 MEIS3P2A8K0S8 358 aa10.81□□□□□ -0.68
TOP3A-211ENST00000581536 LYPLA2O95372 231 aa10.81□□□□□ -0.68
TOP3A-211ENST00000581536 ITGB1P05556 798 aa10.81□□□□□ -0.68
TOP3A-211ENST00000581536 OR52Z1P0C646 297 aa10.81□□□□□ -0.68
TOP3A-211ENST00000581536 ATF7P17544 494 aaPredicted RBP10.81□□□□□ -0.68
TOP3A-211ENST00000581536 CDC25AP30304 524 aa10.81□□□□□ -0.68
TOP3A-211ENST00000581536 GTF2F1P35269 517 aaKnown RBP eCLIP10.81□□□□□ -0.68
TOP3A-211ENST00000581536 RFC5P40937 340 aa10.81□□□□□ -0.68
TOP3A-211ENST00000581536 RARRES1P49788 294 aa10.81□□□□□ -0.68
TOP3A-211ENST00000581536 CDC42EP1Q00587 391 aa10.81□□□□□ -0.68
TOP3A-211ENST00000581536 EMC2Q15006 297 aa10.81□□□□□ -0.68
TOP3A-211ENST00000581536 TCEAL5Q5H9L2 206 aa10.81□□□□□ -0.68
TOP3A-211ENST00000581536 CLLU1OSQ5K130 101 aa10.81□□□□□ -0.68
TOP3A-211ENST00000581536 SPOUT1Q5T280 376 aaKnown RBP10.81□□□□□ -0.68
TOP3A-211ENST00000581536 ZNF598Q86UK7 904 aaKnown RBP10.81□□□□□ -0.68
TOP3A-211ENST00000581536 FERMT3Q86UX7 667 aa10.81□□□□□ -0.68
TOP3A-211ENST00000581536 HELQQ8TDG4 1101 aa10.81□□□□□ -0.68
TOP3A-211ENST00000581536 ASAP3Q8TDY4 903 aa10.81□□□□□ -0.68
TOP3A-211ENST00000581536 HLA-CQ95604 372 aa10.81□□□□□ -0.68
TOP3A-211ENST00000581536 NECAB3Q96P71 396 aaPredicted RBP10.81□□□□□ -0.68
TOP3A-211ENST00000581536 ELAC1Q9H777 363 aaKnown RBP10.81□□□□□ -0.68
TOP3A-211ENST00000581536 GPRC5CQ9NQ84 441 aa10.81□□□□□ -0.68
TOP3A-211ENST00000581536 ANKEF1Q9NU02 776 aa10.81□□□□□ -0.68
TOP3A-211ENST00000581536 TMEM161AQ9NX61 479 aa10.81□□□□□ -0.68
TOP3A-211ENST00000581536 PCDHGC5Q9Y5F6 944 aa10.81□□□□□ -0.68
TOP3A-211ENST00000581536 GTF3C3Q9Y5Q9 886 aa10.81□□□□□ -0.68
TOP3A-211ENST00000581536 MYH11P35749 1972 aa10.81□□□□□ -0.68
TOP3A-211ENST00000581536 PP2D1A8MPX8 630 aa10.8□□□□□ -0.68
TOP3A-211ENST00000581536 HOXA2O43364 376 aa10.8□□□□□ -0.68
TOP3A-211ENST00000581536 XRCC6P12956 609 aaKnown RBP eCLIP10.8□□□□□ -0.68
TOP3A-211ENST00000581536 HOXA11P31270 313 aaPredicted RBP10.8□□□□□ -0.68
TOP3A-211ENST00000581536 IRS1P35568 1242 aa10.8□□□□□ -0.68
TOP3A-211ENST00000581536 ARL2P36404 184 aa10.8□□□□□ -0.68
TOP3A-211ENST00000581536 PBX3P40426 434 aa10.8□□□□□ -0.68
TOP3A-211ENST00000581536 CATSPER4Q7RTX7 472 aa10.8□□□□□ -0.68
TOP3A-211ENST00000581536 ZNF410Q86VK4 478 aa10.8□□□□□ -0.68
TOP3A-211ENST00000581536 RNF149Q8NC42 400 aa10.8□□□□□ -0.68
TOP3A-211ENST00000581536 PSPC1Q8WXF1 523 aaKnown RBP10.8□□□□□ -0.68
TOP3A-211ENST00000581536 ZNF516Q92618 1163 aa10.8□□□□□ -0.68
TOP3A-211ENST00000581536 JPH2Q9BR39 696 aaPredicted RBP10.8□□□□□ -0.68
TOP3A-211ENST00000581536 POLR3CQ9BUI4 534 aaPredicted RBP10.8□□□□□ -0.68
TOP3A-211ENST00000581536 IGFLR1Q9H665 355 aa10.8□□□□□ -0.68
TOP3A-211ENST00000581536 TUFT1Q9NNX1 390 aa10.8□□□□□ -0.68
TOP3A-211ENST00000581536 NOL7Q9UMY1 257 aaKnown RBP10.8□□□□□ -0.68
TOP3A-211ENST00000581536 SMC3Q9UQE7 1217 aa10.8□□□□□ -0.68
TOP3A-211ENST00000581536 TDRD15B5MCY1 1934 aaKnown RBP10.8□□□□□ -0.68
TOP3A-211ENST00000581536 NT5C1B-RDH14C9J2C7 533 aa10.79□□□□□ -0.68
TOP3A-211ENST00000581536 H3BQV1 296 aa10.79□□□□□ -0.68
TOP3A-211ENST00000581536 LINC01565O15544 149 aa10.79□□□□□ -0.68
TOP3A-211ENST00000581536 ASAP2O43150 1006 aa10.79□□□□□ -0.68
TOP3A-211ENST00000581536 EOMESO95936 686 aa10.79□□□□□ -0.68
TOP3A-211ENST00000581536 GLRA2P23416 452 aa10.79□□□□□ -0.68
TOP3A-211ENST00000581536 RPA1P27694 616 aa10.79□□□□□ -0.68
TOP3A-211ENST00000581536 PHKA2P46019 1235 aa10.79□□□□□ -0.68
TOP3A-211ENST00000581536 TRAPPC10P48553 1259 aa10.79□□□□□ -0.68
TOP3A-211ENST00000581536 AFF1P51825 1210 aaKnown RBP10.79□□□□□ -0.68
TOP3A-211ENST00000581536 ERVFC1P60507 584 aa10.79□□□□□ -0.68
TOP3A-211ENST00000581536 HYAL1Q12794 435 aa10.79□□□□□ -0.68
TOP3A-211ENST00000581536 PTPROQ16827 1216 aa10.79□□□□□ -0.68
TOP3A-211ENST00000581536 UBXN11Q5T124 520 aa10.79□□□□□ -0.68
TOP3A-211ENST00000581536 LARP1BQ659C4 914 aaKnown RBP10.79□□□□□ -0.68
TOP3A-211ENST00000581536 TWF2Q6IBS0 349 aaKnown RBP10.79□□□□□ -0.68
TOP3A-211ENST00000581536 EP400NLQ6ZTU2 488 aa10.79□□□□□ -0.68
TOP3A-211ENST00000581536 ADGRD2Q7Z7M1 963 aa10.79□□□□□ -0.68
TOP3A-211ENST00000581536 EXOC8Q8IYI6 725 aa10.79□□□□□ -0.68
TOP3A-211ENST00000581536 COLGALT1Q8NBJ5 622 aa10.79□□□□□ -0.68
TOP3A-211ENST00000581536 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.79□□□□□ -0.68
TOP3A-211ENST00000581536 NEK9Q8TD19 979 aa10.79□□□□□ -0.68
TOP3A-211ENST00000581536 POF1BQ8WVV4 589 aa10.79□□□□□ -0.68
TOP3A-211ENST00000581536 TCP11Q8WWU5 503 aa10.79□□□□□ -0.68
TOP3A-211ENST00000581536 P2RX5Q93086 422 aa10.79□□□□□ -0.68
TOP3A-211ENST00000581536 CPB2Q96IY4 423 aa10.79□□□□□ -0.68
TOP3A-211ENST00000581536 C11orf84Q9BUA3 381 aaPredicted RBP10.79□□□□□ -0.68
TOP3A-211ENST00000581536 PLVAPQ9BX97 442 aa10.79□□□□□ -0.68
TOP3A-211ENST00000581536 INO80BQ9C086 356 aaPredicted RBP10.79□□□□□ -0.68
TOP3A-211ENST00000581536 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.79□□□□□ -0.68
TOP3A-211ENST00000581536 CHST12Q9NRB3 414 aa10.79□□□□□ -0.68
TOP3A-211ENST00000581536 LRWD1Q9UFC0 647 aa10.79□□□□□ -0.68
TOP3A-211ENST00000581536 PIN4Q9Y237 131 aaKnown RBP10.79□□□□□ -0.68
TOP3A-211ENST00000581536 PPME1Q9Y570 386 aa10.79□□□□□ -0.68
TOP3A-211ENST00000581536 USO1O60763 962 aaKnown RBP10.78□□□□□ -0.68
TOP3A-211ENST00000581536 DGAT1O75907 488 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms