RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 SNUPNO95149 360 aaKnown RBP6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 PCDH8O95206 1070 aa6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 LPLP06858 475 aa6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 RBP3P10745 1247 aa6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 HIBADHP31937 336 aaKnown RBP6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 ACVRL1P37023 503 aa6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 ABHD18Q0P651 414 aa6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 PIN1Q13526 163 aaPredicted RBP6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 R3HDM1Q15032 1099 aaKnown RBP6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 ACAP2Q15057 778 aa6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 PPP2R5AQ15172 486 aa6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 PITRM1Q5JRX3 1037 aa6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 RNF207Q6ZRF8 634 aa6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 KANSL1Q7Z3B3 1105 aa6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 OR14K1Q8NGZ2 314 aa6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 TSR2Q969E8 191 aaKnown RBP6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 PLEKHG4BQ96PX9 1271 aa6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 ORAI2Q96SN7 254 aa6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 PLA2G12BQ9BX93 195 aa6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 SLC13A1Q9BZW2 595 aa6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 OR10A5Q9H207 317 aa6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 PRDM12Q9H4Q4 367 aa6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 Q9UFV3 132 aa6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 IP6K2Q9UHH9 426 aa6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 PCDHGA9Q9Y5G4 932 aaKnown RBP6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 PCDHGA8Q9Y5G5 932 aa6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 PCDHGA7Q9Y5G6 932 aa6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 PCDHGA6Q9Y5G7 932 aa6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 PCDHGA3Q9Y5H0 932 aa6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 PCDHGA2Q9Y5H1 932 aa6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 MRFAP1Q9Y605 127 aa6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 KLHL33A6NCF5 533 aa6.22□□□□□ -1.41
SMCHD1-205ENST00000581383 TRIM75PA6NK02 468 aa6.22□□□□□ -1.41
SMCHD1-205ENST00000581383 OVOL3O00110 214 aa6.22□□□□□ -1.41
SMCHD1-205ENST00000581383 SLPIP03973 132 aa6.22□□□□□ -1.41
SMCHD1-205ENST00000581383 APEX1P27695 318 aaKnown RBP6.22□□□□□ -1.41
SMCHD1-205ENST00000581383 MSX2P35548 267 aaPredicted RBP6.22□□□□□ -1.41
SMCHD1-205ENST00000581383 MRE11P49959 708 aa6.22□□□□□ -1.41
SMCHD1-205ENST00000581383 TGFB2P61812 414 aa6.22□□□□□ -1.41
SMCHD1-205ENST00000581383 SRSF2Q01130 221 aaKnown RBP6.22□□□□□ -1.41
SMCHD1-205ENST00000581383 CD83Q01151 205 aa6.22□□□□□ -1.41
SMCHD1-205ENST00000581383 MAP3K12Q12852 859 aa6.22□□□□□ -1.41
SMCHD1-205ENST00000581383 FHL2Q14192 279 aa6.22□□□□□ -1.41
SMCHD1-205ENST00000581383 ODF1Q14990 250 aa6.22□□□□□ -1.41
SMCHD1-205ENST00000581383 PCOLCEQ15113 449 aa6.22□□□□□ -1.41
SMCHD1-205ENST00000581383 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.22□□□□□ -1.41
SMCHD1-205ENST00000581383 LSM12Q3MHD2 195 aaKnown RBP6.22□□□□□ -1.41
SMCHD1-205ENST00000581383 TOR2AQ5JU69 321 aa6.22□□□□□ -1.41
SMCHD1-205ENST00000581383 GRAMD4Q6IC98 578 aa6.22□□□□□ -1.41
SMCHD1-205ENST00000581383 EDAQ92838 391 aa6.22□□□□□ -1.41
SMCHD1-205ENST00000581383 EXTL1Q92935 676 aa6.22□□□□□ -1.41
SMCHD1-205ENST00000581383 TMEM176AQ96HP8 235 aa6.22□□□□□ -1.41
SMCHD1-205ENST00000581383 MTG2Q9H4K7 406 aa6.22□□□□□ -1.41
SMCHD1-205ENST00000581383 ZNF180Q9UJW8 692 aa6.22□□□□□ -1.41
SMCHD1-205ENST00000581383 TMPRSS11EQ9UL52 423 aa6.22□□□□□ -1.41
SMCHD1-205ENST00000581383 NUMBLQ9Y6R0 609 aa6.22□□□□□ -1.41
SMCHD1-205ENST00000581383 MYPNQ86TC9 1320 aa6.22□□□□□ -1.41
SMCHD1-205ENST00000581383 ZNF202O95125 648 aa6.21□□□□□ -1.42
SMCHD1-205ENST00000581383 OSMP13725 252 aa6.21□□□□□ -1.42
SMCHD1-205ENST00000581383 ZSCAN20P17040 1043 aaPredicted RBP6.21□□□□□ -1.42
SMCHD1-205ENST00000581383 MCM7P33993 719 aa6.21□□□□□ -1.42
SMCHD1-205ENST00000581383 LGALS4P56470 323 aa6.21□□□□□ -1.42
SMCHD1-205ENST00000581383 BCAR1P56945 870 aa6.21□□□□□ -1.42
SMCHD1-205ENST00000581383 PTH1RQ03431 593 aa6.21□□□□□ -1.42
SMCHD1-205ENST00000581383 CRHR2Q13324 411 aa6.21□□□□□ -1.42
SMCHD1-205ENST00000581383 TRIM25Q14258 630 aaKnown RBP6.21□□□□□ -1.42
SMCHD1-205ENST00000581383 RPGRQ92834 1020 aaKnown RBP6.21□□□□□ -1.42
SMCHD1-205ENST00000581383 SLC2A13Q96QE2 648 aa6.21□□□□□ -1.42
SMCHD1-205ENST00000581383 RTFDC1Q9BY42 306 aaPredicted RBP6.21□□□□□ -1.42
SMCHD1-205ENST00000581383 OR10A2Q9H208 303 aa6.21□□□□□ -1.42
SMCHD1-205ENST00000581383 SLITRK6Q9H5Y7 841 aa6.21□□□□□ -1.42
SMCHD1-205ENST00000581383 USP18Q9UMW8 372 aa6.21□□□□□ -1.42
SMCHD1-205ENST00000581383 E2F8A0AVK6 867 aa6.2□□□□□ -1.42
SMCHD1-205ENST00000581383 TSPAN6O43657 245 aa6.2□□□□□ -1.42
SMCHD1-205ENST00000581383 SCGB1D2O95969 90 aa6.2□□□□□ -1.42
SMCHD1-205ENST00000581383 PFKMP08237 780 aa6.2□□□□□ -1.42
SMCHD1-205ENST00000581383 CT47B1P0C2W7 299 aaPredicted RBP6.2□□□□□ -1.42
SMCHD1-205ENST00000581383 RECQLP46063 649 aaPredicted RBP6.2□□□□□ -1.42
SMCHD1-205ENST00000581383 STAT5BP51692 787 aa6.2□□□□□ -1.42
SMCHD1-205ENST00000581383 KLF10Q13118 480 aa6.2□□□□□ -1.42
SMCHD1-205ENST00000581383 GRM7Q14831 915 aa6.2□□□□□ -1.42
SMCHD1-205ENST00000581383 STILQ15468 1287 aa6.2□□□□□ -1.42
SMCHD1-205ENST00000581383 EFCAB2Q5VUJ9 269 aa6.2□□□□□ -1.42
SMCHD1-205ENST00000581383 KANK2Q63ZY3 851 aa6.2□□□□□ -1.42
SMCHD1-205ENST00000581383 LARP4Q71RC2 724 aaKnown RBP eCLIP6.2□□□□□ -1.42
SMCHD1-205ENST00000581383 LYSMD2Q8IV50 215 aa6.2□□□□□ -1.42
SMCHD1-205ENST00000581383 WDR75Q8IWA0 830 aaKnown RBP6.2□□□□□ -1.42
SMCHD1-205ENST00000581383 CHPFQ8IZ52 775 aa6.2□□□□□ -1.42
SMCHD1-205ENST00000581383 D2HGDHQ8N465 521 aa6.2□□□□□ -1.42
SMCHD1-205ENST00000581383 JPH3Q8WXH2 748 aaPredicted RBP6.2□□□□□ -1.42
SMCHD1-205ENST00000581383 JADE3Q92613 823 aa6.2□□□□□ -1.42
SMCHD1-205ENST00000581383 RAX2Q96IS3 184 aa6.2□□□□□ -1.42
SMCHD1-205ENST00000581383 CDH19Q9H159 772 aa6.2□□□□□ -1.42
SMCHD1-205ENST00000581383 WNT8AQ9H1J5 351 aa6.2□□□□□ -1.42
SMCHD1-205ENST00000581383 KCTD10Q9H3F6 313 aa6.2□□□□□ -1.42
SMCHD1-205ENST00000581383 DPP7Q9UHL4 492 aa6.2□□□□□ -1.42
SMCHD1-205ENST00000581383 MAGEL2Q9UJ55 1249 aa6.2□□□□□ -1.42
SMCHD1-205ENST00000581383 DENND2AQ9ULE3 1009 aa6.2□□□□□ -1.42
SMCHD1-205ENST00000581383 REXO2Q9Y3B8 237 aaKnown RBP6.2□□□□□ -1.42
SMCHD1-205ENST00000581383 GPR45Q9Y5Y3 372 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms