RNA–Protein interactions for RNA: ENST00000580875.1

SNX11-207, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-207ENST00000580875 OTUD6AQ7L8S5 288 aa23.25■■□□□ 1.31
SNX11-207ENST00000580875 MRPL10Q7Z7H8 261 aaKnown RBP23.25■■□□□ 1.31
SNX11-207ENST00000580875 UBALD2Q8IYN6 164 aa23.25■■□□□ 1.31
SNX11-207ENST00000580875 C12orf76Q8N812 135 aaPredicted RBP23.25■■□□□ 1.31
SNX11-207ENST00000580875 TCP11Q8WWU5 503 aa23.25■■□□□ 1.31
SNX11-207ENST00000580875 MINDY3Q9H8M7 445 aa23.25■■□□□ 1.31
SNX11-207ENST00000580875 RSAD1Q9HA92 442 aa23.25■■□□□ 1.31
SNX11-207ENST00000580875 SORCS3Q9UPU3 1222 aa23.25■■□□□ 1.31
SNX11-207ENST00000580875 PFKFB2O60825 505 aa23.24■■□□□ 1.31
SNX11-207ENST00000580875 WEE2P0C1S8 567 aa23.24■■□□□ 1.31
SNX11-207ENST00000580875 VCPP55072 806 aaKnown RBP23.24■■□□□ 1.31
SNX11-207ENST00000580875 TCF15Q12870 199 aa23.24■■□□□ 1.31
SNX11-207ENST00000580875 EMC2Q15006 297 aa23.24■■□□□ 1.31
SNX11-207ENST00000580875 ATAT1Q5SQI0 421 aa23.24■■□□□ 1.31
SNX11-207ENST00000580875 KIAA1841Q6NSI8 718 aa23.24■■□□□ 1.31
SNX11-207ENST00000580875 PPFIBP1Q86W92 1011 aa23.24■■□□□ 1.31
SNX11-207ENST00000580875 ZNF280BQ86YH2 543 aa23.24■■□□□ 1.31
SNX11-207ENST00000580875 OXER1Q8TDS5 423 aa23.24■■□□□ 1.31
SNX11-207ENST00000580875 SLC22A17Q8WUG5 538 aa23.24■■□□□ 1.31
SNX11-207ENST00000580875 GJB4Q9NTQ9 266 aa23.24■■□□□ 1.31
SNX11-207ENST00000580875 KANSL3Q9P2N6 904 aa23.24■■□□□ 1.31
SNX11-207ENST00000580875 TPCN1Q9ULQ1 816 aa23.24■■□□□ 1.31
SNX11-207ENST00000580875 RBM19Q9Y4C8 960 aaKnown RBP23.24■■□□□ 1.31
SNX11-207ENST00000580875 ZDBF2Q9HCK1 2354 aa23.24■■□□□ 1.31
SNX11-207ENST00000580875 CNTNAP2Q9UHC6 1331 aa23.24■■□□□ 1.31
SNX11-207ENST00000580875 ASAP2O43150 1006 aa23.23■■□□□ 1.31
SNX11-207ENST00000580875 B4GALT3O60512 393 aa23.23■■□□□ 1.31
SNX11-207ENST00000580875 AVPR2P30518 371 aa23.23■■□□□ 1.31
SNX11-207ENST00000580875 HOXA11P31270 313 aaPredicted RBP23.23■■□□□ 1.31
SNX11-207ENST00000580875 PTPN14Q15678 1187 aa23.23■■□□□ 1.31
SNX11-207ENST00000580875 NCAPH2Q6IBW4 605 aa23.23■■□□□ 1.31
SNX11-207ENST00000580875 CABP7Q86V35 215 aa23.23■■□□□ 1.31
SNX11-207ENST00000580875 POTEDQ86YR6 584 aa23.23■■□□□ 1.31
SNX11-207ENST00000580875 RNF149Q8NC42 400 aa23.23■■□□□ 1.31
SNX11-207ENST00000580875 FAM193BQ96PV7 902 aaPredicted RBP23.23■■□□□ 1.31
SNX11-207ENST00000580875 PHOX2BQ99453 314 aa23.23■■□□□ 1.31
SNX11-207ENST00000580875 TMEM175Q9BSA9 504 aa23.23■■□□□ 1.31
SNX11-207ENST00000580875 VN1R3Q9BXE9 311 aa23.23■■□□□ 1.31
SNX11-207ENST00000580875 ZSWIM4Q9H7M6 989 aa23.23■■□□□ 1.31
SNX11-207ENST00000580875 BMP2KQ9NSY1 1161 aaPredicted RBP23.23■■□□□ 1.31
SNX11-207ENST00000580875 RGL1Q9NZL6 768 aa23.23■■□□□ 1.31
SNX11-207ENST00000580875 DBR1Q9UK59 544 aaKnown RBP23.23■■□□□ 1.31
SNX11-207ENST00000580875 KMT2EQ8IZD2 1858 aa23.22■■□□□ 1.31
SNX11-207ENST00000580875 DDHD2O94830 711 aa23.22■■□□□ 1.31
SNX11-207ENST00000580875 UBXN11Q5T124 520 aa23.22■■□□□ 1.31
SNX11-207ENST00000580875 KANK3Q6NY19 840 aa23.22■■□□□ 1.31
SNX11-207ENST00000580875 FERMT3Q86UX7 667 aa23.22■■□□□ 1.31
SNX11-207ENST00000580875 SLFN12Q8IYM2 578 aa23.22■■□□□ 1.31
SNX11-207ENST00000580875 TDRD5Q8NAT2 981 aaKnown RBP23.22■■□□□ 1.31
SNX11-207ENST00000580875 EMILIN2Q9BXX0 1053 aa23.22■■□□□ 1.31
SNX11-207ENST00000580875 USTQ9Y2C2 406 aa23.22■■□□□ 1.31
SNX11-207ENST00000580875 ERLIN2O94905 339 aa23.21■■□□□ 1.31
SNX11-207ENST00000580875 BAG4O95429 457 aaKnown RBP23.21■■□□□ 1.31
SNX11-207ENST00000580875 BRD1O95696 1058 aa23.21■■□□□ 1.31
SNX11-207ENST00000580875 ALDH2P05091 517 aa23.21■■□□□ 1.31
SNX11-207ENST00000580875 NCLP19338 710 aaKnown RBP23.21■■□□□ 1.31
SNX11-207ENST00000580875 AFF1P51825 1210 aaKnown RBP23.21■■□□□ 1.31
SNX11-207ENST00000580875 CYP4A11Q02928 519 aa23.21■■□□□ 1.31
SNX11-207ENST00000580875 SPIRE1Q08AE8 756 aa23.21■■□□□ 1.31
SNX11-207ENST00000580875 CTTNQ14247 550 aaKnown RBP23.21■■□□□ 1.31
SNX11-207ENST00000580875 PCBP1Q15365 356 aaKnown RBP eCLIP23.21■■□□□ 1.31
SNX11-207ENST00000580875 XKR9Q5GH70 373 aa23.21■■□□□ 1.31
SNX11-207ENST00000580875 ZDHHC14Q8IZN3 488 aa23.21■■□□□ 1.31
SNX11-207ENST00000580875 CNNM3Q8NE01 707 aa23.21■■□□□ 1.31
SNX11-207ENST00000580875 WASF1Q92558 559 aa23.21■■□□□ 1.31
SNX11-207ENST00000580875 DYDC2Q96IM9 177 aa23.21■■□□□ 1.31
SNX11-207ENST00000580875 MTRQ99707 1265 aa23.21■■□□□ 1.31
SNX11-207ENST00000580875 SFXN1Q9H9B4 322 aa23.21■■□□□ 1.31
SNX11-207ENST00000580875 UBN1Q9NPG3 1134 aa23.21■■□□□ 1.31
SNX11-207ENST00000580875 ORC3Q9UBD5 711 aaPredicted RBP23.21■■□□□ 1.31
SNX11-207ENST00000580875 FAN1Q9Y2M0 1017 aa23.21■■□□□ 1.31
SNX11-207ENST00000580875 PDGFBP01127 241 aaPredicted RBP23.2■■□□□ 1.3
SNX11-207ENST00000580875 POMCP01189 267 aa23.2■■□□□ 1.3
SNX11-207ENST00000580875 EARS2Q5JPH6 523 aaKnown RBP23.2■■□□□ 1.3
SNX11-207ENST00000580875 TMC5Q6UXY8 1006 aa23.2■■□□□ 1.3
SNX11-207ENST00000580875 TPH2Q8IWU9 490 aa23.2■■□□□ 1.3
SNX11-207ENST00000580875 PLCD3Q8N3E9 789 aa23.2■■□□□ 1.3
SNX11-207ENST00000580875 IRF2BPLQ9H1B7 796 aa23.2■■□□□ 1.3
SNX11-207ENST00000580875 ZBTB39O15060 712 aa23.19■■□□□ 1.3
SNX11-207ENST00000580875 DTNBO60941 627 aa23.19■■□□□ 1.3
SNX11-207ENST00000580875 CTDNEP1O95476 244 aa23.19■■□□□ 1.3
SNX11-207ENST00000580875 SSBP05455 408 aaKnown RBP eCLIP23.19■■□□□ 1.3
SNX11-207ENST00000580875 KLRC2P26717 231 aa23.19■■□□□ 1.3
SNX11-207ENST00000580875 KRT2P35908 639 aa23.19■■□□□ 1.3
SNX11-207ENST00000580875 NUBP1P53384 320 aa23.19■■□□□ 1.3
SNX11-207ENST00000580875 MXD4Q14582 209 aaPredicted RBP23.19■■□□□ 1.3
SNX11-207ENST00000580875 KLHL5Q96PQ7 755 aa23.19■■□□□ 1.3
SNX11-207ENST00000580875 BRMS1Q9HCU9 246 aa23.19■■□□□ 1.3
SNX11-207ENST00000580875 MRPL17Q9NRX2 175 aaKnown RBP23.19■■□□□ 1.3
SNX11-207ENST00000580875 LIMD1Q9UGP4 676 aa23.19■■□□□ 1.3
SNX11-207ENST00000580875 SPDYE4A6NLX3 237 aa23.18■■□□□ 1.3
SNX11-207ENST00000580875 NRP1O14786 923 aa23.18■■□□□ 1.3
SNX11-207ENST00000580875 SLITRK3O94933 977 aa23.18■■□□□ 1.3
SNX11-207ENST00000580875 ASGR2P07307 311 aa23.18■■□□□ 1.3
SNX11-207ENST00000580875 CNPP09543 421 aaKnown RBP23.18■■□□□ 1.3
SNX11-207ENST00000580875 ITGA4P13612 1032 aa23.18■■□□□ 1.3
SNX11-207ENST00000580875 AXLP30530 894 aa23.18■■□□□ 1.3
SNX11-207ENST00000580875 CLCN4P51793 760 aa23.18■■□□□ 1.3
SNX11-207ENST00000580875 PTENP60484 403 aa23.18■■□□□ 1.3
SNX11-207ENST00000580875 NCBP1Q09161 790 aaKnown RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms