RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 PDXKO00764 312 aa13.85□□□□□ -0.19
CDK5RAP3-217ENST00000580287 EIF3DO15371 548 aaKnown RBP eCLIP13.85□□□□□ -0.19
CDK5RAP3-217ENST00000580287 CLCN3P51790 818 aa13.85□□□□□ -0.19
CDK5RAP3-217ENST00000580287 TLK2Q86UE8 772 aa13.85□□□□□ -0.19
CDK5RAP3-217ENST00000580287 SLC35F6Q8N357 371 aa13.85□□□□□ -0.19
CDK5RAP3-217ENST00000580287 PRPF31Q8WWY3 499 aaKnown RBP13.85□□□□□ -0.19
CDK5RAP3-217ENST00000580287 KIFAP3Q92845 792 aa13.85□□□□□ -0.19
CDK5RAP3-217ENST00000580287 GBP3Q9H0R5 595 aa13.85□□□□□ -0.19
CDK5RAP3-217ENST00000580287 NDST4Q9H3R1 872 aa13.85□□□□□ -0.19
CDK5RAP3-217ENST00000580287 TUT1Q9H6E5 874 aaKnown RBP13.85□□□□□ -0.19
CDK5RAP3-217ENST00000580287 MMRN2Q9H8L6 949 aa13.85□□□□□ -0.19
CDK5RAP3-217ENST00000580287 MYH9P35579 1960 aaKnown RBP13.84□□□□□ -0.19
CDK5RAP3-217ENST00000580287 ANKRD63C9JTQ0 380 aa13.84□□□□□ -0.19
CDK5RAP3-217ENST00000580287 PPFIA4O75335 1185 aa13.84□□□□□ -0.19
CDK5RAP3-217ENST00000580287 CSDE1O75534 798 aaKnown RBP13.84□□□□□ -0.19
CDK5RAP3-217ENST00000580287 NDUFA10O95299 355 aa13.84□□□□□ -0.19
CDK5RAP3-217ENST00000580287 MYCNP04198 464 aaPredicted RBP13.84□□□□□ -0.19
CDK5RAP3-217ENST00000580287 SRGAP2CP0DJJ0 459 aa13.84□□□□□ -0.19
CDK5RAP3-217ENST00000580287 NCKAP1LP55160 1127 aa13.84□□□□□ -0.19
CDK5RAP3-217ENST00000580287 FAM193AP78312 1265 aa13.84□□□□□ -0.19
CDK5RAP3-217ENST00000580287 BMS1Q14692 1282 aaKnown RBP13.84□□□□□ -0.19
CDK5RAP3-217ENST00000580287 VWA3BQ502W6 1294 aa13.84□□□□□ -0.19
CDK5RAP3-217ENST00000580287 TAS1R3Q7RTX0 852 aa13.84□□□□□ -0.19
CDK5RAP3-217ENST00000580287 TBX20Q9UMR3 447 aa13.84□□□□□ -0.19
CDK5RAP3-217ENST00000580287 WDR81Q562E7 1941 aa13.84□□□□□ -0.19
CDK5RAP3-217ENST00000580287 MYADML2A6NDP7 307 aa13.84□□□□□ -0.19
CDK5RAP3-217ENST00000580287 ENC1O14682 589 aa13.84□□□□□ -0.19
CDK5RAP3-217ENST00000580287 CETN3O15182 167 aa13.84□□□□□ -0.19
CDK5RAP3-217ENST00000580287 POLR3GO15318 223 aaPredicted RBP13.84□□□□□ -0.19
CDK5RAP3-217ENST00000580287 SMTNP53814 917 aa13.84□□□□□ -0.19
CDK5RAP3-217ENST00000580287 GTF2BQ00403 316 aa13.84□□□□□ -0.19
CDK5RAP3-217ENST00000580287 APBA1Q02410 837 aa13.84□□□□□ -0.19
CDK5RAP3-217ENST00000580287 CRACR2AQ9BSW2 395 aa13.84□□□□□ -0.19
CDK5RAP3-217ENST00000580287 NUP58Q9BVL2 599 aa13.84□□□□□ -0.19
CDK5RAP3-217ENST00000580287 RNF216Q9NWF9 866 aaPredicted RBP13.84□□□□□ -0.19
CDK5RAP3-217ENST00000580287 GUCA1BQ9UMX6 200 aa13.84□□□□□ -0.19
CDK5RAP3-217ENST00000580287 GOLGA8IPA6NC78 632 aa13.83□□□□□ -0.19
CDK5RAP3-217ENST00000580287 GOLGA8JA6NMD2 632 aa13.83□□□□□ -0.19
CDK5RAP3-217ENST00000580287 TTLL13PA6NNM8 815 aa13.83□□□□□ -0.19
CDK5RAP3-217ENST00000580287 EFCAB8A8MWE9 144 aa13.83□□□□□ -0.19
CDK5RAP3-217ENST00000580287 CALUO43852 315 aaPredicted RBP13.83□□□□□ -0.19
CDK5RAP3-217ENST00000580287 MAFO75444 373 aaPredicted RBP13.83□□□□□ -0.19
CDK5RAP3-217ENST00000580287 IGHA2P01877 340 aa13.83□□□□□ -0.19
CDK5RAP3-217ENST00000580287 ARL2P36404 184 aa13.83□□□□□ -0.19
CDK5RAP3-217ENST00000580287 PLA2G4AP47712 749 aa13.83□□□□□ -0.19
CDK5RAP3-217ENST00000580287 EDRF1Q3B7T1 1238 aa13.83□□□□□ -0.19
CDK5RAP3-217ENST00000580287 MSL3Q8N5Y2 521 aaKnown RBP13.83□□□□□ -0.19
CDK5RAP3-217ENST00000580287 EMID1Q96A84 441 aaPredicted RBP13.83□□□□□ -0.19
CDK5RAP3-217ENST00000580287 DNAJC7Q99615 494 aa13.83□□□□□ -0.19
CDK5RAP3-217ENST00000580287 PARD6BQ9BYG5 372 aa13.83□□□□□ -0.19
CDK5RAP3-217ENST00000580287 PGK1P00558 417 aa13.83□□□□□ -0.2
CDK5RAP3-217ENST00000580287 EDN1P05305 212 aa13.83□□□□□ -0.2
CDK5RAP3-217ENST00000580287 MAPTP10636 758 aaKnown RBP13.83□□□□□ -0.2
CDK5RAP3-217ENST00000580287 FECHP22830 423 aa13.83□□□□□ -0.2
CDK5RAP3-217ENST00000580287 ADSSP30520 456 aa13.83□□□□□ -0.2
CDK5RAP3-217ENST00000580287 MAN2A1Q16706 1144 aa13.83□□□□□ -0.2
CDK5RAP3-217ENST00000580287 EFCAB12Q6NXP0 572 aa13.83□□□□□ -0.2
CDK5RAP3-217ENST00000580287 WDR59Q6PJI9 974 aa13.83□□□□□ -0.2
CDK5RAP3-217ENST00000580287 TMCO3Q6UWJ1 677 aa13.83□□□□□ -0.2
CDK5RAP3-217ENST00000580287 RHPN2Q8IUC4 686 aa13.83□□□□□ -0.2
CDK5RAP3-217ENST00000580287 IFT74Q96LB3 600 aa13.83□□□□□ -0.2
CDK5RAP3-217ENST00000580287 NTPCRQ9BSD7 190 aaKnown RBP13.83□□□□□ -0.2
CDK5RAP3-217ENST00000580287 SETD4Q9NVD3 440 aa13.83□□□□□ -0.2
CDK5RAP3-217ENST00000580287 REXO2Q9Y3B8 237 aaKnown RBP13.83□□□□□ -0.2
CDK5RAP3-217ENST00000580287 IPO7O95373 1038 aaKnown RBP13.82□□□□□ -0.2
CDK5RAP3-217ENST00000580287 KLRC1P26715 233 aa13.82□□□□□ -0.2
CDK5RAP3-217ENST00000580287 CAPSQ13938 189 aa13.82□□□□□ -0.2
CDK5RAP3-217ENST00000580287 DGKDQ16760 1214 aa13.82□□□□□ -0.2
CDK5RAP3-217ENST00000580287 DCAF17Q5H9S7 520 aaPredicted RBP13.82□□□□□ -0.2
CDK5RAP3-217ENST00000580287 SLC39A4Q6P5W5 647 aa13.82□□□□□ -0.2
CDK5RAP3-217ENST00000580287 HS2ST1Q7LGA3 356 aa13.82□□□□□ -0.2
CDK5RAP3-217ENST00000580287 KIAA1328Q86T90 577 aa13.82□□□□□ -0.2
CDK5RAP3-217ENST00000580287 ACCSQ96QU6 501 aa13.82□□□□□ -0.2
CDK5RAP3-217ENST00000580287 TIPINQ9BVW5 301 aa13.82□□□□□ -0.2
CDK5RAP3-217ENST00000580287 CALCOCO1Q9P1Z2 691 aa13.82□□□□□ -0.2
CDK5RAP3-217ENST00000580287 HDAC6Q9UBN7 1215 aa13.82□□□□□ -0.2
CDK5RAP3-217ENST00000580287 HBP1O60381 514 aa13.82□□□□□ -0.2
CDK5RAP3-217ENST00000580287 GYS2P54840 703 aa13.82□□□□□ -0.2
CDK5RAP3-217ENST00000580287 ZBED6P86452 979 aa13.82□□□□□ -0.2
CDK5RAP3-217ENST00000580287 TMCO4Q5TGY1 634 aa13.82□□□□□ -0.2
CDK5RAP3-217ENST00000580287 TCERG1LQ5VWI1 586 aa13.82□□□□□ -0.2
CDK5RAP3-217ENST00000580287 FAM43BQ6ZT52 329 aaPredicted RBP13.82□□□□□ -0.2
CDK5RAP3-217ENST00000580287 SAAL1Q96ER3 474 aa13.82□□□□□ -0.2
CDK5RAP3-217ENST00000580287 ZBTB45Q96K62 511 aaPredicted RBP13.82□□□□□ -0.2
CDK5RAP3-217ENST00000580287 FAM84AQ96KN4 292 aa13.82□□□□□ -0.2
CDK5RAP3-217ENST00000580287 FAM167AQ96KS9 214 aa13.82□□□□□ -0.2
CDK5RAP3-217ENST00000580287 NLRP4Q96MN2 994 aa13.82□□□□□ -0.2
CDK5RAP3-217ENST00000580287 CTAGE9A4FU28 777 aa13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 A6NJR5 290 aa13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 ZRANB2O95218 330 aaKnown RBP eCLIP13.81□□□□□ -0.27e-19■□□□□ 10
CDK5RAP3-217ENST00000580287 RHOXF2BP0C7M4 288 aa13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 ARHGAP25P42331 645 aa13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 CACNB2Q08289 660 aaPredicted RBP13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 HIC1Q14526 733 aa13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 STXBP4Q6ZWJ1 553 aa13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 ZC3H3Q8IXZ2 948 aaKnown RBP13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 RNF149Q8NC42 400 aa13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 RETREG2Q8NC44 543 aa13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 KAT2BQ92831 832 aa13.81□□□□□ -0.2
CDK5RAP3-217ENST00000580287 CEP63Q96MT8 703 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms