RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 WRAP73Q9P2S5 460 aaPredicted RBP14.04□□□□□ -0.16
SMARCD2-207ENST00000578234 STK39Q9UEW8 545 aa14.04□□□□□ -0.16
SMARCD2-207ENST00000578234 DBR1Q9UK59 544 aaKnown RBP14.04□□□□□ -0.16
SMARCD2-207ENST00000578234 TPCN1Q9ULQ1 816 aa14.04□□□□□ -0.16
SMARCD2-207ENST00000578234 PCDHB2Q9Y5E7 798 aa14.04□□□□□ -0.16
SMARCD2-207ENST00000578234 STK36Q9NRP7 1315 aa14.04□□□□□ -0.16
SMARCD2-207ENST00000578234 CCNT1O60563 726 aaKnown RBP14.03□□□□□ -0.16
SMARCD2-207ENST00000578234 PFKFB2O60825 505 aa14.03□□□□□ -0.16
SMARCD2-207ENST00000578234 HOXA11P31270 313 aaPredicted RBP14.03□□□□□ -0.16
SMARCD2-207ENST00000578234 LAMTOR4Q0VGL1 99 aa14.03□□□□□ -0.16
SMARCD2-207ENST00000578234 KANK3Q6NY19 840 aa14.03□□□□□ -0.16
SMARCD2-207ENST00000578234 AGMOQ6ZNB7 445 aa14.03□□□□□ -0.16
SMARCD2-207ENST00000578234 SLC22A17Q8WUG5 538 aa14.03□□□□□ -0.16
SMARCD2-207ENST00000578234 TCP11Q8WWU5 503 aa14.03□□□□□ -0.16
SMARCD2-207ENST00000578234 RIPOR3Q96MK2 946 aa14.03□□□□□ -0.16
SMARCD2-207ENST00000578234 MFSD1Q9H3U5 465 aa14.03□□□□□ -0.16
SMARCD2-207ENST00000578234 MINDY3Q9H8M7 445 aa14.03□□□□□ -0.16
SMARCD2-207ENST00000578234 KANSL3Q9P2N6 904 aa14.03□□□□□ -0.16
SMARCD2-207ENST00000578234 DNAJB4Q9UDY4 337 aa14.03□□□□□ -0.16
SMARCD2-207ENST00000578234 CNTNAP2Q9UHC6 1331 aa14.02□□□□□ -0.17
SMARCD2-207ENST00000578234 H0Y858 1186 aa14.02□□□□□ -0.17
SMARCD2-207ENST00000578234 BAG4O95429 457 aaKnown RBP14.02□□□□□ -0.17
SMARCD2-207ENST00000578234 LARGE1O95461 756 aa14.02□□□□□ -0.17
SMARCD2-207ENST00000578234 PDGFBP01127 241 aaPredicted RBP14.02□□□□□ -0.17
SMARCD2-207ENST00000578234 ALDH2P05091 517 aa14.02□□□□□ -0.17
SMARCD2-207ENST00000578234 SRGAP2CP0DJJ0 459 aa14.02□□□□□ -0.17
SMARCD2-207ENST00000578234 AVPR2P30518 371 aa14.02□□□□□ -0.17
SMARCD2-207ENST00000578234 YWHABP31946 246 aaKnown RBP14.02□□□□□ -0.17
SMARCD2-207ENST00000578234 SLC11A1P49279 550 aa14.02□□□□□ -0.17
SMARCD2-207ENST00000578234 SPIRE1Q08AE8 756 aa14.02□□□□□ -0.17
SMARCD2-207ENST00000578234 ANKRD1Q15327 319 aa14.02□□□□□ -0.17
SMARCD2-207ENST00000578234 ATAT1Q5SQI0 421 aa14.02□□□□□ -0.17
SMARCD2-207ENST00000578234 KIAA1841Q6NSI8 718 aa14.02□□□□□ -0.17
SMARCD2-207ENST00000578234 PIK3AP1Q6ZUJ8 805 aa14.02□□□□□ -0.17
SMARCD2-207ENST00000578234 PPFIBP1Q86W92 1011 aa14.02□□□□□ -0.17
SMARCD2-207ENST00000578234 ZNF280BQ86YH2 543 aa14.02□□□□□ -0.17
SMARCD2-207ENST00000578234 SLFN12Q8IYM2 578 aa14.02□□□□□ -0.17
SMARCD2-207ENST00000578234 NECAB1Q8N987 351 aa14.02□□□□□ -0.17
SMARCD2-207ENST00000578234 URGCPQ8TCY9 931 aa14.02□□□□□ -0.17
SMARCD2-207ENST00000578234 OXER1Q8TDS5 423 aa14.02□□□□□ -0.17
SMARCD2-207ENST00000578234 BCL7CQ8WUZ0 217 aaPredicted RBP14.02□□□□□ -0.17
SMARCD2-207ENST00000578234 WASF1Q92558 559 aa14.02□□□□□ -0.17
SMARCD2-207ENST00000578234 TMEM143Q96AN5 459 aa14.02□□□□□ -0.17
SMARCD2-207ENST00000578234 FAM193BQ96PV7 902 aaPredicted RBP14.02□□□□□ -0.17
SMARCD2-207ENST00000578234 LXNQ9BS40 222 aa14.02□□□□□ -0.17
SMARCD2-207ENST00000578234 ZSWIM4Q9H7M6 989 aa14.02□□□□□ -0.17
SMARCD2-207ENST00000578234 GJB4Q9NTQ9 266 aa14.02□□□□□ -0.17
SMARCD2-207ENST00000578234 RGL1Q9NZL6 768 aa14.02□□□□□ -0.17
SMARCD2-207ENST00000578234 LIMD1Q9UGP4 676 aa14.02□□□□□ -0.17
SMARCD2-207ENST00000578234 SORCS3Q9UPU3 1222 aa14.02□□□□□ -0.17
SMARCD2-207ENST00000578234 C2CD4DB7Z1M9 353 aa14.01□□□□□ -0.17
SMARCD2-207ENST00000578234 DDHD2O94830 711 aa14.01□□□□□ -0.17
SMARCD2-207ENST00000578234 ASGR2P07307 311 aa14.01□□□□□ -0.17
SMARCD2-207ENST00000578234 EPCAMP16422 314 aa14.01□□□□□ -0.17
SMARCD2-207ENST00000578234 EMC2Q15006 297 aa14.01□□□□□ -0.17
SMARCD2-207ENST00000578234 PCBP1Q15365 356 aaKnown RBP eCLIP14.01□□□□□ -0.17
SMARCD2-207ENST00000578234 XKR9Q5GH70 373 aa14.01□□□□□ -0.17
SMARCD2-207ENST00000578234 UBXN11Q5T124 520 aa14.01□□□□□ -0.17
SMARCD2-207ENST00000578234 FERMT3Q86UX7 667 aa14.01□□□□□ -0.17
SMARCD2-207ENST00000578234 POTEDQ86YR6 584 aa14.01□□□□□ -0.17
SMARCD2-207ENST00000578234 UBALD2Q8IYN6 164 aa14.01□□□□□ -0.17
SMARCD2-207ENST00000578234 RNF149Q8NC42 400 aa14.01□□□□□ -0.17
SMARCD2-207ENST00000578234 CNNM3Q8NE01 707 aa14.01□□□□□ -0.17
SMARCD2-207ENST00000578234 TMEM175Q9BSA9 504 aa14.01□□□□□ -0.17
SMARCD2-207ENST00000578234 VN1R3Q9BXE9 311 aa14.01□□□□□ -0.17
SMARCD2-207ENST00000578234 RSAD1Q9HA92 442 aa14.01□□□□□ -0.17
SMARCD2-207ENST00000578234 BMP2KQ9NSY1 1161 aaPredicted RBP14.01□□□□□ -0.17
SMARCD2-207ENST00000578234 USTQ9Y2C2 406 aa14.01□□□□□ -0.17
SMARCD2-207ENST00000578234 KMT2EQ8IZD2 1858 aa14□□□□□ -0.17
SMARCD2-207ENST00000578234 STK25O00506 426 aa14□□□□□ -0.17
SMARCD2-207ENST00000578234 B4GALT3O60512 393 aa14□□□□□ -0.17
SMARCD2-207ENST00000578234 GFRA3O60609 400 aa14□□□□□ -0.17
SMARCD2-207ENST00000578234 SLITRK3O94933 977 aa14□□□□□ -0.17
SMARCD2-207ENST00000578234 CTDNEP1O95476 244 aa14□□□□□ -0.17
SMARCD2-207ENST00000578234 MYBP10242 640 aa14□□□□□ -0.17
SMARCD2-207ENST00000578234 NCLP19338 710 aaKnown RBP14□□□□□ -0.17
SMARCD2-207ENST00000578234 AFF1P51825 1210 aaKnown RBP14□□□□□ -0.17
SMARCD2-207ENST00000578234 POU5F1BQ06416 359 aa14□□□□□ -0.17
SMARCD2-207ENST00000578234 TCF15Q12870 199 aa14□□□□□ -0.17
SMARCD2-207ENST00000578234 MTMR3Q13615 1198 aa14□□□□□ -0.17
SMARCD2-207ENST00000578234 MXD4Q14582 209 aaPredicted RBP14□□□□□ -0.17
SMARCD2-207ENST00000578234 RABEP1Q15276 862 aa14□□□□□ -0.17
SMARCD2-207ENST00000578234 PTPN14Q15678 1187 aa14□□□□□ -0.17
SMARCD2-207ENST00000578234 ME3Q16798 604 aa14□□□□□ -0.17
SMARCD2-207ENST00000578234 EARS2Q5JPH6 523 aaKnown RBP14□□□□□ -0.17
SMARCD2-207ENST00000578234 NCAPH2Q6IBW4 605 aa14□□□□□ -0.17
SMARCD2-207ENST00000578234 TMC5Q6UXY8 1006 aa14□□□□□ -0.17
SMARCD2-207ENST00000578234 CABP7Q86V35 215 aa14□□□□□ -0.17
SMARCD2-207ENST00000578234 ZDHHC14Q8IZN3 488 aa14□□□□□ -0.17
SMARCD2-207ENST00000578234 PLCD3Q8N3E9 789 aa14□□□□□ -0.17
SMARCD2-207ENST00000578234 TDRD5Q8NAT2 981 aaKnown RBP14□□□□□ -0.17
SMARCD2-207ENST00000578234 DYDC2Q96IM9 177 aa14□□□□□ -0.17
SMARCD2-207ENST00000578234 EMILIN2Q9BXX0 1053 aa14□□□□□ -0.17
SMARCD2-207ENST00000578234 UBN1Q9NPG3 1134 aa14□□□□□ -0.17
SMARCD2-207ENST00000578234 ORC3Q9UBD5 711 aaPredicted RBP14□□□□□ -0.17
SMARCD2-207ENST00000578234 PCDHA12Q9UN75 941 aa14□□□□□ -0.17
SMARCD2-207ENST00000578234 FAN1Q9Y2M0 1017 aa14□□□□□ -0.17
SMARCD2-207ENST00000578234 C2CD2LO14523 706 aa13.99□□□□□ -0.17
SMARCD2-207ENST00000578234 NRP1O14786 923 aa13.99□□□□□ -0.17
SMARCD2-207ENST00000578234 ZBTB39O15060 712 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms