RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 SF3A1Q15459 793 aaKnown RBP3.91□□□□□ -1.78
TOP2A-202ENST00000577541 VPS72Q15906 364 aa3.91□□□□□ -1.78
TOP2A-202ENST00000577541 FAM214AQ32MH5 1076 aa3.91□□□□□ -1.78
TOP2A-202ENST00000577541 MTERF2Q49AM1 385 aa3.91□□□□□ -1.78
TOP2A-202ENST00000577541 TRIM61Q5EBN2 209 aa3.91□□□□□ -1.78
TOP2A-202ENST00000577541 FOXB2Q5VYV0 432 aa3.91□□□□□ -1.78
TOP2A-202ENST00000577541 CLEC14AQ86T13 490 aa3.91□□□□□ -1.78
TOP2A-202ENST00000577541 CPEB3Q8NE35 698 aaKnown RBP3.91□□□□□ -1.78
TOP2A-202ENST00000577541 EXOC2Q96KP1 924 aa3.91□□□□□ -1.78
TOP2A-202ENST00000577541 GBP4Q96PP9 640 aa3.91□□□□□ -1.78
TOP2A-202ENST00000577541 TEX101Q9BY14 249 aa3.91□□□□□ -1.78
TOP2A-202ENST00000577541 ASB1Q9Y576 335 aa3.91□□□□□ -1.78
TOP2A-202ENST00000577541 CCDC163A0A0D9SF12 145 aa3.9□□□□□ -1.79
TOP2A-202ENST00000577541 UNC119BA6NIH7 251 aa3.9□□□□□ -1.79
TOP2A-202ENST00000577541 DIAPH1O60610 1272 aaKnown RBP3.9□□□□□ -1.79
TOP2A-202ENST00000577541 PYGMP11217 842 aa3.9□□□□□ -1.79
TOP2A-202ENST00000577541 KRT10P13645 584 aa3.9□□□□□ -1.79
TOP2A-202ENST00000577541 RARRES1P49788 294 aa3.9□□□□□ -1.79
TOP2A-202ENST00000577541 GABREP78334 506 aa3.9□□□□□ -1.79
TOP2A-202ENST00000577541 SIM1P81133 766 aaPredicted RBP3.9□□□□□ -1.79
TOP2A-202ENST00000577541 SSRP1Q08945 709 aaKnown RBP3.9□□□□□ -1.79
TOP2A-202ENST00000577541 PAK1Q13153 545 aa3.9□□□□□ -1.79
TOP2A-202ENST00000577541 FHL1Q13642 323 aa3.9□□□□□ -1.79
TOP2A-202ENST00000577541 ZNF517Q6ZMY9 492 aaPredicted RBP3.9□□□□□ -1.79
TOP2A-202ENST00000577541 GSTCDQ8NEC7 633 aa3.9□□□□□ -1.79
TOP2A-202ENST00000577541 FBXW5Q969U6 566 aa3.9□□□□□ -1.79
TOP2A-202ENST00000577541 FCRL4Q96PJ5 515 aa3.9□□□□□ -1.79
TOP2A-202ENST00000577541 DEPDC7Q96QD5 511 aa3.9□□□□□ -1.79
TOP2A-202ENST00000577541 PDCD2LQ9BRP1 358 aa3.9□□□□□ -1.79
TOP2A-202ENST00000577541 DHRS4Q9BTZ2 278 aa3.9□□□□□ -1.79
TOP2A-202ENST00000577541 CPEB1Q9BZB8 566 aaKnown RBP3.9□□□□□ -1.79
TOP2A-202ENST00000577541 HAPLN2Q9GZV7 340 aa3.9□□□□□ -1.79
TOP2A-202ENST00000577541 SMURF1Q9HCE7 757 aa3.9□□□□□ -1.79
TOP2A-202ENST00000577541 SNTG2Q9NY99 539 aa3.9□□□□□ -1.79
TOP2A-202ENST00000577541 GOLGA6L22H0YM25 854 aa3.89□□□□□ -1.79
TOP2A-202ENST00000577541 ZNF561-AS1K7EIQ3 104 aa3.89□□□□□ -1.79
TOP2A-202ENST00000577541 HOXA3O43365 443 aaPredicted RBP3.89□□□□□ -1.79
TOP2A-202ENST00000577541 CFBP00751 764 aa3.89□□□□□ -1.79
TOP2A-202ENST00000577541 FAM153BP0C7A2 387 aa3.89□□□□□ -1.79
TOP2A-202ENST00000577541 EGR2P11161 476 aaPredicted RBP3.89□□□□□ -1.79
TOP2A-202ENST00000577541 CACNA2D1P54289 1103 aa3.89□□□□□ -1.79
TOP2A-202ENST00000577541 TP53BP2Q13625 1128 aa3.89□□□□□ -1.79
TOP2A-202ENST00000577541 ZNF169Q14929 603 aaPredicted RBP3.89□□□□□ -1.79
TOP2A-202ENST00000577541 DDB1Q16531 1140 aa3.89□□□□□ -1.79
TOP2A-202ENST00000577541 KIAA1614Q5VZ46 1190 aa3.89□□□□□ -1.79
TOP2A-202ENST00000577541 SLC44A3Q8N4M1 653 aa3.89□□□□□ -1.79
TOP2A-202ENST00000577541 GLB1L3Q8NCI6 653 aaPredicted RBP3.89□□□□□ -1.79
TOP2A-202ENST00000577541 OR52N2Q8NGI0 321 aa3.89□□□□□ -1.79
TOP2A-202ENST00000577541 ASB10Q8WXI3 467 aa3.89□□□□□ -1.79
TOP2A-202ENST00000577541 NELL2Q99435 816 aa3.89□□□□□ -1.79
TOP2A-202ENST00000577541 ADAM2Q99965 735 aa3.89□□□□□ -1.79
TOP2A-202ENST00000577541 WACQ9BTA9 647 aa3.89□□□□□ -1.79
TOP2A-202ENST00000577541 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.89□□□□□ -1.797e-6■■□□□ 11.9
TOP2A-202ENST00000577541 MRPS23Q9Y3D9 190 aaKnown RBP3.89□□□□□ -1.79
TOP2A-202ENST00000577541 CHST2Q9Y4C5 530 aa3.89□□□□□ -1.79
TOP2A-202ENST00000577541 TRAF6Q9Y4K3 522 aa3.89□□□□□ -1.79
TOP2A-202ENST00000577541 MAST3O60307 1309 aa3.89□□□□□ -1.79
TOP2A-202ENST00000577541 FAM221BA6H8Z2 402 aa3.88□□□□□ -1.79
TOP2A-202ENST00000577541 EFCAB14O75071 495 aa3.88□□□□□ -1.79
TOP2A-202ENST00000577541 TKTP29401 623 aaKnown RBP3.88□□□□□ -1.79
TOP2A-202ENST00000577541 GTF2F1P35269 517 aaKnown RBP eCLIP3.88□□□□□ -1.79
TOP2A-202ENST00000577541 CRY1Q16526 586 aa3.88□□□□□ -1.79
TOP2A-202ENST00000577541 FAM209AQ5JX71 171 aa3.88□□□□□ -1.79
TOP2A-202ENST00000577541 C16orf59Q7L2K0 433 aa3.88□□□□□ -1.79
TOP2A-202ENST00000577541 PLXDC1Q8IUK5 500 aa3.88□□□□□ -1.79
TOP2A-202ENST00000577541 PCDH19Q8TAB3 1148 aa3.88□□□□□ -1.79
TOP2A-202ENST00000577541 LEFTY2O00292 366 aa3.87□□□□□ -1.79
TOP2A-202ENST00000577541 FOXP2O15409 715 aa3.87□□□□□ -1.79
TOP2A-202ENST00000577541 DAPK3O43293 454 aa3.87□□□□□ -1.79
TOP2A-202ENST00000577541 CELA2AP08217 269 aa3.87□□□□□ -1.79
TOP2A-202ENST00000577541 DDX6P26196 483 aaKnown RBP eCLIP3.87□□□□□ -1.798e-13■■□□□ 12.8
TOP2A-202ENST00000577541 PTGER1P34995 402 aa3.87□□□□□ -1.79
TOP2A-202ENST00000577541 KIR2DL3P43628 341 aa3.87□□□□□ -1.79
TOP2A-202ENST00000577541 LACTBP83111 547 aaPredicted RBP3.87□□□□□ -1.79
TOP2A-202ENST00000577541 DGKDQ16760 1214 aa3.87□□□□□ -1.79
TOP2A-202ENST00000577541 ZNF788Q6ZQV5 615 aa3.87□□□□□ -1.79
TOP2A-202ENST00000577541 FAM83AQ86UY5 434 aa3.87□□□□□ -1.79
TOP2A-202ENST00000577541 ALOXE3Q9BYJ1 711 aa3.87□□□□□ -1.79
TOP2A-202ENST00000577541 PFDN2Q9UHV9 154 aa3.87□□□□□ -1.79
TOP2A-202ENST00000577541 KDM2BQ8NHM5 1336 aa3.87□□□□□ -1.79
TOP2A-202ENST00000577541 WIPF3A6NGB9 483 aa3.86□□□□□ -1.79
TOP2A-202ENST00000577541 ERVV-2B6SEH9 535 aa3.86□□□□□ -1.79
TOP2A-202ENST00000577541 DNAJC6O75061 913 aa3.86□□□□□ -1.79
TOP2A-202ENST00000577541 RASGRP1O95267 797 aa3.86□□□□□ -1.79
TOP2A-202ENST00000577541 NPTXRO95502 500 aa3.86□□□□□ -1.79
TOP2A-202ENST00000577541 HLA-DOAP06340 250 aa3.86□□□□□ -1.79
TOP2A-202ENST00000577541 PROK1P58294 105 aa3.86□□□□□ -1.79
TOP2A-202ENST00000577541 SRSF7Q16629 238 aaKnown RBP eCLIP3.86□□□□□ -1.79
TOP2A-202ENST00000577541 C2orf27AQ580R0 203 aa3.86□□□□□ -1.79
TOP2A-202ENST00000577541 PIK3R6Q5UE93 754 aa3.86□□□□□ -1.79
TOP2A-202ENST00000577541 ZSWIM2Q8NEG5 633 aa3.86□□□□□ -1.79
TOP2A-202ENST00000577541 OR5AN1Q8NGI8 311 aa3.86□□□□□ -1.79
TOP2A-202ENST00000577541 SREK1Q8WXA9 508 aaKnown RBP3.86□□□□□ -1.79
TOP2A-202ENST00000577541 RGMAQ96B86 450 aa3.86□□□□□ -1.79
TOP2A-202ENST00000577541 WDR92Q96MX6 357 aa3.86□□□□□ -1.79
TOP2A-202ENST00000577541 CDC6Q99741 560 aa3.86□□□□□ -1.79
TOP2A-202ENST00000577541 MRPL4Q9BYD3 311 aaKnown RBP3.86□□□□□ -1.79
TOP2A-202ENST00000577541 CELF4Q9BZC1 486 aaKnown RBP3.86□□□□□ -1.79
TOP2A-202ENST00000577541 EPC1Q9H2F5 836 aa3.86□□□□□ -1.79
TOP2A-202ENST00000577541 KLK15Q9H2R5 256 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms