RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 KREMEN2Q8NCW0 462 aa19.62■□□□□ 0.73
CIITA-206ENST00000571190 PGBD4Q96DM1 585 aa19.62■□□□□ 0.73
CIITA-206ENST00000571190 NECTIN4Q96NY8 510 aa19.62■□□□□ 0.73
CIITA-206ENST00000571190 XPNPEP1Q9NQW7 623 aa19.62■□□□□ 0.73
CIITA-206ENST00000571190 NR2E1Q9Y466 385 aa19.62■□□□□ 0.73
CIITA-206ENST00000571190 PIEZO1Q92508 2521 aa19.62■□□□□ 0.73
CIITA-206ENST00000571190 LILRB3O75022 631 aa19.61■□□□□ 0.73
CIITA-206ENST00000571190 SLITRK3O94933 977 aa19.61■□□□□ 0.73
CIITA-206ENST00000571190 AVPR2P30518 371 aa19.61■□□□□ 0.73
CIITA-206ENST00000571190 MTHFRP42898 656 aa19.61■□□□□ 0.73
CIITA-206ENST00000571190 BMS1Q14692 1282 aaKnown RBP19.61■□□□□ 0.73
CIITA-206ENST00000571190 EMC2Q15006 297 aa19.61■□□□□ 0.73
CIITA-206ENST00000571190 NCAPH2Q6IBW4 605 aa19.61■□□□□ 0.73
CIITA-206ENST00000571190 EXOC8Q8IYI6 725 aa19.61■□□□□ 0.73
CIITA-206ENST00000571190 RNF149Q8NC42 400 aa19.61■□□□□ 0.73
CIITA-206ENST00000571190 SMG8Q8ND04 991 aaKnown RBP19.61■□□□□ 0.73
CIITA-206ENST00000571190 SMOC2Q9H3U7 446 aa19.61■□□□□ 0.73
CIITA-206ENST00000571190 RSAD1Q9HA92 442 aa19.61■□□□□ 0.73
CIITA-206ENST00000571190 ORC3Q9UBD5 711 aaPredicted RBP19.61■□□□□ 0.73
CIITA-206ENST00000571190 TRIOO75962 3097 aa19.61■□□□□ 0.73
CIITA-206ENST00000571190 ZNF318Q5VUA4 2279 aa19.6■□□□□ 0.73
CIITA-206ENST00000571190 CARNS1A5YM72 827 aa19.6■□□□□ 0.73
CIITA-206ENST00000571190 BRD1O95696 1058 aa19.6■□□□□ 0.73
CIITA-206ENST00000571190 XBP1P17861 261 aa19.6■□□□□ 0.73
CIITA-206ENST00000571190 NCLP19338 710 aaKnown RBP19.6■□□□□ 0.73
CIITA-206ENST00000571190 CYP4A11Q02928 519 aa19.6■□□□□ 0.73
CIITA-206ENST00000571190 GIT2Q14161 759 aa19.6■□□□□ 0.73
CIITA-206ENST00000571190 KIAA1841Q6NSI8 718 aa19.6■□□□□ 0.73
CIITA-206ENST00000571190 RIPOR3Q96MK2 946 aa19.6■□□□□ 0.73
CIITA-206ENST00000571190 KLHL5Q96PQ7 755 aa19.6■□□□□ 0.73
CIITA-206ENST00000571190 NAP1L4Q99733 375 aaKnown RBP19.6■□□□□ 0.73
CIITA-206ENST00000571190 RNF39Q9H2S5 420 aa19.6■□□□□ 0.73
CIITA-206ENST00000571190 ZSWIM4Q9H7M6 989 aa19.6■□□□□ 0.73
CIITA-206ENST00000571190 DZANK1Q9NVP4 752 aa19.6■□□□□ 0.73
CIITA-206ENST00000571190 WNT7AO00755 349 aa19.59■□□□□ 0.73
CIITA-206ENST00000571190 NRP1O14786 923 aa19.59■□□□□ 0.73
CIITA-206ENST00000571190 ASAP2O43150 1006 aa19.59■□□□□ 0.73
CIITA-206ENST00000571190 GAS2O43903 313 aaKnown RBP19.59■□□□□ 0.73
CIITA-206ENST00000571190 LARGE1O95461 756 aa19.59■□□□□ 0.73
CIITA-206ENST00000571190 AK2P54819 239 aa19.59■□□□□ 0.73
CIITA-206ENST00000571190 PTPN5P54829 565 aa19.59■□□□□ 0.73
CIITA-206ENST00000571190 XKR9Q5GH70 373 aa19.59■□□□□ 0.73
CIITA-206ENST00000571190 OTUD6AQ7L8S5 288 aa19.59■□□□□ 0.73
CIITA-206ENST00000571190 NECAB1Q8N987 351 aa19.59■□□□□ 0.73
CIITA-206ENST00000571190 URGCPQ8TCY9 931 aa19.59■□□□□ 0.73
CIITA-206ENST00000571190 TCP11Q8WWU5 503 aa19.59■□□□□ 0.73
CIITA-206ENST00000571190 HSD17B14Q9BPX1 270 aa19.59■□□□□ 0.73
CIITA-206ENST00000571190 EIF2AQ9BY44 585 aaKnown RBP19.59■□□□□ 0.73
CIITA-206ENST00000571190 SORCS3Q9UPU3 1222 aa19.59■□□□□ 0.73
CIITA-206ENST00000571190 MYH9P35579 1960 aaKnown RBP19.59■□□□□ 0.73
CIITA-206ENST00000571190 WDFY4Q6ZS81 3184 aa19.58■□□□□ 0.73
CIITA-206ENST00000571190 CNTNAP2Q9UHC6 1331 aa19.58■□□□□ 0.73
CIITA-206ENST00000571190 MARCH6O60337 910 aa19.58■□□□□ 0.72
CIITA-206ENST00000571190 TSPAN1O60635 241 aa19.58■□□□□ 0.72
CIITA-206ENST00000571190 EFEMP2O95967 443 aa19.58■□□□□ 0.72
CIITA-206ENST00000571190 POMCP01189 267 aa19.58■□□□□ 0.72
CIITA-206ENST00000571190 ALDH2P05091 517 aa19.58■□□□□ 0.72
CIITA-206ENST00000571190 ASGR2P07307 311 aa19.58■□□□□ 0.72
CIITA-206ENST00000571190 CNPP09543 421 aaKnown RBP19.58■□□□□ 0.72
CIITA-206ENST00000571190 PTENP60484 403 aa19.58■□□□□ 0.72
CIITA-206ENST00000571190 ATAT1Q5SQI0 421 aa19.58■□□□□ 0.72
CIITA-206ENST00000571190 TMC5Q6UXY8 1006 aa19.58■□□□□ 0.72
CIITA-206ENST00000571190 TAS1R1Q7RTX1 841 aa19.58■□□□□ 0.72
CIITA-206ENST00000571190 ZBTB33Q86T24 672 aa19.58■□□□□ 0.72
CIITA-206ENST00000571190 TPH2Q8IWU9 490 aa19.58■□□□□ 0.72
CIITA-206ENST00000571190 SLFN12Q8IYM2 578 aa19.58■□□□□ 0.72
CIITA-206ENST00000571190 ZDHHC14Q8IZN3 488 aa19.58■□□□□ 0.72
CIITA-206ENST00000571190 PRRX2Q99811 253 aa19.58■□□□□ 0.72
CIITA-206ENST00000571190 EIF2AK1Q9BQI3 630 aaKnown RBP19.58■□□□□ 0.72
CIITA-206ENST00000571190 TMEM175Q9BSA9 504 aa19.58■□□□□ 0.72
CIITA-206ENST00000571190 MARCH5Q9NX47 278 aa19.58■□□□□ 0.72
CIITA-206ENST00000571190 MIOSQ9NXC5 875 aa19.58■□□□□ 0.72
CIITA-206ENST00000571190 KANSL3Q9P2N6 904 aa19.58■□□□□ 0.72
CIITA-206ENST00000571190 LIMD1Q9UGP4 676 aa19.58■□□□□ 0.72
CIITA-206ENST00000571190 FAN1Q9Y2M0 1017 aa19.58■□□□□ 0.72
CIITA-206ENST00000571190 INPPL1O15357 1258 aa19.57■□□□□ 0.72
CIITA-206ENST00000571190 LYPLA2O95372 231 aa19.57■□□□□ 0.72
CIITA-206ENST00000571190 SSBP05455 408 aaKnown RBP eCLIP19.57■□□□□ 0.72
CIITA-206ENST00000571190 CLCN4P51793 760 aa19.57■□□□□ 0.72
CIITA-206ENST00000571190 AMHR2Q16671 573 aa19.57■□□□□ 0.72
CIITA-206ENST00000571190 ME3Q16798 604 aa19.57■□□□□ 0.72
CIITA-206ENST00000571190 CABP7Q86V35 215 aa19.57■□□□□ 0.72
CIITA-206ENST00000571190 IFNLR1Q8IU57 520 aaPredicted RBP19.57■□□□□ 0.72
CIITA-206ENST00000571190 UBALD2Q8IYN6 164 aa19.57■□□□□ 0.72
CIITA-206ENST00000571190 TMEM87AQ8NBN3 555 aa19.57■□□□□ 0.72
CIITA-206ENST00000571190 ASAP3Q8TDY4 903 aa19.57■□□□□ 0.72
CIITA-206ENST00000571190 MTRQ99707 1265 aa19.57■□□□□ 0.72
CIITA-206ENST00000571190 USTQ9Y2C2 406 aa19.57■□□□□ 0.72
CIITA-206ENST00000571190 HES2Q9Y543 173 aa19.57■□□□□ 0.72
CIITA-206ENST00000571190 IPPQ9Y573 584 aa19.57■□□□□ 0.72
CIITA-206ENST00000571190 BAG4O95429 457 aaKnown RBP19.56■□□□□ 0.72
CIITA-206ENST00000571190 KRT2P35908 639 aa19.56■□□□□ 0.72
CIITA-206ENST00000571190 ARL2P36404 184 aa19.56■□□□□ 0.72
CIITA-206ENST00000571190 ANAPC15P60006 121 aa19.56■□□□□ 0.72
CIITA-206ENST00000571190 DSC1Q08554 894 aa19.56■□□□□ 0.72
CIITA-206ENST00000571190 MTMR3Q13615 1198 aa19.56■□□□□ 0.72
CIITA-206ENST00000571190 GPR149Q86SP6 731 aa19.56■□□□□ 0.72
CIITA-206ENST00000571190 PPFIBP1Q86W92 1011 aa19.56■□□□□ 0.72
CIITA-206ENST00000571190 COLGALT2Q8IYK4 626 aa19.56■□□□□ 0.72
CIITA-206ENST00000571190 RNF168Q8IYW5 571 aaPredicted RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms