RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 BTBD7Q9P203 1132 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 SSC5DA1L4H1 1573 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 CLIC2O15247 247 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 SLC16A4O15374 487 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 UBA1P22314 1058 aaKnown RBP6.55□□□□□ -1.36
CYLD-216ENST00000569891 HUNKP57058 714 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 MIIPQ5JXC2 388 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 MAEAQ7L5Y9 396 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 HPS3Q969F9 1004 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 TRIM11Q96F44 468 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 ADPGKQ9BRR6 497 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 STK33Q9BYT3 514 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 SIK3Q9Y2K2 1263 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 SYNGAP1Q96PV0 1343 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 SIP14410 1827 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 TULP1O00294 542 aaPredicted RBP6.55□□□□□ -1.36
CYLD-216ENST00000569891 PHACTR2O75167 634 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 P4HA1P13674 534 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 TCP1P17987 556 aaKnown RBP6.55□□□□□ -1.36
CYLD-216ENST00000569891 TNFAIP3P21580 790 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 GTF2F1P35269 517 aaKnown RBP eCLIP6.55□□□□□ -1.36
CYLD-216ENST00000569891 TCF7P36402 384 aaPredicted RBP6.55□□□□□ -1.36
CYLD-216ENST00000569891 NPTX2P47972 431 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 BMS1Q14692 1282 aaKnown RBP6.55□□□□□ -1.36
CYLD-216ENST00000569891 UTP14CQ5TAP6 766 aaKnown RBP6.55□□□□□ -1.36
CYLD-216ENST00000569891 MSANTD4Q8NCY6 345 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 MED15Q96RN5 788 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 SELENOOQ9BVL4 669 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 PORCNQ9H237 461 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 PDCL3Q9H2J4 239 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 SOWAHDA6NJG2 315 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 EXTL3O43909 919 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 DESP17661 470 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 RGS2P41220 211 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 KIF11P52732 1056 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 MAP9Q49MG5 647 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 GOLGA1Q92805 767 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 CLMNQ96JQ2 1002 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 TMEM8AQ9HCN3 771 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 LZTFL1Q9NQ48 299 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 AIPL1Q9NZN9 384 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 ASTN1O14525 1302 aa6.55□□□□□ -1.36
CYLD-216ENST00000569891 CTAGE15A4D2H0 777 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 SFI1A8K8P3 1242 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 RSPH10B2B2RC85 870 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 PPFIA4O75335 1185 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 FARP2O94887 1054 aaPredicted RBP6.54□□□□□ -1.36
CYLD-216ENST00000569891 RSPH10BP0C881 870 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 CTAGE8P0CG41 777 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 TAL1P17542 331 aaPredicted RBP6.54□□□□□ -1.36
CYLD-216ENST00000569891 TBXAS1P24557 533 aaPredicted RBP6.54□□□□□ -1.36
CYLD-216ENST00000569891 POU5F1BQ06416 359 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 TAF1CQ15572 869 aaPredicted RBP6.54□□□□□ -1.36
CYLD-216ENST00000569891 MAP1SQ66K74 1059 aaPredicted RBP6.54□□□□□ -1.36
CYLD-216ENST00000569891 CTAGE6Q86UF2 777 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 CTAGE4Q8IX94 777 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 PRMT7Q9NVM4 692 aaPredicted RBP6.54□□□□□ -1.36
CYLD-216ENST00000569891 DMAC2Q9NW81 257 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 RBPJLQ9UBG7 517 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 APEX2Q9UBZ4 518 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 DDX41Q9UJV9 622 aaKnown RBP6.54□□□□□ -1.36
CYLD-216ENST00000569891 EFCAB8A8MWE9 144 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 MAFO75444 373 aaPredicted RBP6.54□□□□□ -1.36
CYLD-216ENST00000569891 LGR5O75473 907 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 CCNE2O96020 404 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 CETN2P41208 172 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 ZNF157P51786 506 aaPredicted RBP6.54□□□□□ -1.36
CYLD-216ENST00000569891 PPP2R5EQ16537 467 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 KLHDC7AQ5VTJ3 777 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 ARMCX2Q7L311 632 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 HACE1Q8IYU2 909 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 GOLGA6L1Q8N7Z2 621 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 CTNNBL1Q8WYA6 563 aaPredicted RBP6.54□□□□□ -1.36
CYLD-216ENST00000569891 RRAGCQ9HB90 399 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 NLRC4Q9NPP4 1024 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 GUCA1BQ9UMX6 200 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 LRRC53A6NM62 1247 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 XPOTO43592 962 aaKnown RBP6.54□□□□□ -1.36
CYLD-216ENST00000569891 ATP9AO75110 1047 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 PPP1R37O75864 691 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 TNNC2P02585 160 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 H2AFZP0C0S5 128 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 UCHL3P15374 230 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 CNGA1P29973 690 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 CNTN2Q02246 1040 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 DGKDQ16760 1214 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 H2AFVQ71UI9 128 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 PKNOX2Q96KN3 472 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 NAP1L3Q99457 506 aaPredicted RBP6.54□□□□□ -1.36
CYLD-216ENST00000569891 DHX33Q9H6R0 707 aaKnown RBP6.54□□□□□ -1.36
CYLD-216ENST00000569891 JRKLQ9Y4A0 524 aa6.54□□□□□ -1.36
CYLD-216ENST00000569891 CLDN3O15551 220 aa6.53□□□□□ -1.36
CYLD-216ENST00000569891 COBLO75128 1261 aa6.53□□□□□ -1.36
CYLD-216ENST00000569891 KIF4AO95239 1232 aa6.53□□□□□ -1.36
CYLD-216ENST00000569891 IL18RAPO95256 599 aa6.53□□□□□ -1.36
CYLD-216ENST00000569891 HOXD10P28358 340 aa6.53□□□□□ -1.36
CYLD-216ENST00000569891 CPT1AP50416 773 aa6.53□□□□□ -1.36
CYLD-216ENST00000569891 GRM1Q13255 1194 aa6.53□□□□□ -1.36
CYLD-216ENST00000569891 SNRNP35Q16560 246 aaKnown RBP6.53□□□□□ -1.36
CYLD-216ENST00000569891 CCDC60Q8IWA6 550 aaPredicted RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms