RNA–Protein interactions for RNA: ENST00000569374.1

CCDC113-205, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-205ENST00000569374 EPHB1P54762 984 aa9.25□□□□□ -0.93
CCDC113-205ENST00000569374 GPR85P60893 370 aa9.25□□□□□ -0.93
CCDC113-205ENST00000569374 TNK2Q07912 1038 aa9.25□□□□□ -0.93
CCDC113-205ENST00000569374 SREBF2Q12772 1141 aa9.25□□□□□ -0.93
CCDC113-205ENST00000569374 KCNAB2Q13303 367 aa9.25□□□□□ -0.93
CCDC113-205ENST00000569374 TNFAIP1Q13829 316 aa9.25□□□□□ -0.93
CCDC113-205ENST00000569374 CCL15Q16663 113 aa9.25□□□□□ -0.93
CCDC113-205ENST00000569374 SLC4A8Q2Y0W8 1093 aa9.25□□□□□ -0.93
CCDC113-205ENST00000569374 SUPT20HL1Q3ZLR7 823 aa9.25□□□□□ -0.93
CCDC113-205ENST00000569374 ZCCHC8Q6NZY4 707 aaKnown RBP9.25□□□□□ -0.93
CCDC113-205ENST00000569374 CRTC3Q6UUV7 619 aa9.25□□□□□ -0.93
CCDC113-205ENST00000569374 KIF18BQ86Y91 864 aa9.25□□□□□ -0.93
CCDC113-205ENST00000569374 HSCBQ8IWL3 235 aa9.25□□□□□ -0.93
CCDC113-205ENST00000569374 SIRT2Q8IXJ6 389 aa9.25□□□□□ -0.93
CCDC113-205ENST00000569374 KREMEN2Q8NCW0 462 aa9.25□□□□□ -0.93
CCDC113-205ENST00000569374 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.25□□□□□ -0.93
CCDC113-205ENST00000569374 ALG1Q9BT22 464 aa9.25□□□□□ -0.93
CCDC113-205ENST00000569374 PHF20Q9BVI0 1012 aa9.25□□□□□ -0.93
CCDC113-205ENST00000569374 CCDC8Q9H0W5 538 aaPredicted RBP9.25□□□□□ -0.93
CCDC113-205ENST00000569374 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.25□□□□□ -0.93
CCDC113-205ENST00000569374 PIH1D3Q9NQM4 214 aaKnown RBP9.25□□□□□ -0.93
CCDC113-205ENST00000569374 DENND2AQ9ULE3 1009 aa9.25□□□□□ -0.93
CCDC113-205ENST00000569374 CAPN6Q9Y6Q1 641 aa9.25□□□□□ -0.93
CCDC113-205ENST00000569374 MAST3O60307 1309 aa9.25□□□□□ -0.93
CCDC113-205ENST00000569374 SSU72P8A0A1W2PR75 194 aa9.24□□□□□ -0.93
CCDC113-205ENST00000569374 MANSC4A6NHS7 340 aaPredicted RBP9.24□□□□□ -0.93
CCDC113-205ENST00000569374 BTBD19C9JJ37 291 aa9.24□□□□□ -0.93
CCDC113-205ENST00000569374 ZEB2O60315 1214 aa9.24□□□□□ -0.93
CCDC113-205ENST00000569374 RASGRP1O95267 797 aa9.24□□□□□ -0.93
CCDC113-205ENST00000569374 LTBRP36941 435 aa9.24□□□□□ -0.93
CCDC113-205ENST00000569374 CTSKP43235 329 aa9.24□□□□□ -0.93
CCDC113-205ENST00000569374 JAG1P78504 1218 aa9.24□□□□□ -0.93
CCDC113-205ENST00000569374 PCBP1Q15365 356 aaKnown RBP eCLIP9.24□□□□□ -0.93
CCDC113-205ENST00000569374 TESK1Q15569 626 aa9.24□□□□□ -0.93
CCDC113-205ENST00000569374 ANKRD45Q5TZF3 282 aa9.24□□□□□ -0.93
CCDC113-205ENST00000569374 CDCA2Q69YH5 1023 aaPredicted RBP9.24□□□□□ -0.93
CCDC113-205ENST00000569374 RCSD1Q6JBY9 416 aa9.24□□□□□ -0.93
CCDC113-205ENST00000569374 FAM214BQ7L5A3 538 aa9.24□□□□□ -0.93
CCDC113-205ENST00000569374 STRA8Q7Z7C7 330 aa9.24□□□□□ -0.93
CCDC113-205ENST00000569374 FAM83AQ86UY5 434 aa9.24□□□□□ -0.93
CCDC113-205ENST00000569374 DZIP1Q86YF9 867 aaKnown RBP9.24□□□□□ -0.93
CCDC113-205ENST00000569374 SPATA5Q8NB90 893 aa9.24□□□□□ -0.93
CCDC113-205ENST00000569374 NPLOC4Q8TAT6 608 aa9.24□□□□□ -0.93
CCDC113-205ENST00000569374 FAM151AQ8WW52 585 aa9.24□□□□□ -0.93
CCDC113-205ENST00000569374 SNX21Q969T3 373 aa9.24□□□□□ -0.93
CCDC113-205ENST00000569374 NSUN4Q96CB9 384 aaKnown RBP9.24□□□□□ -0.93
CCDC113-205ENST00000569374 EAF2Q96CJ1 260 aaPredicted RBP9.24□□□□□ -0.93
CCDC113-205ENST00000569374 ORAI3Q9BRQ5 295 aa9.24□□□□□ -0.93
CCDC113-205ENST00000569374 IFT22Q9H7X7 185 aa9.24□□□□□ -0.93
CCDC113-205ENST00000569374 SLC5A4Q9NY91 659 aa9.24□□□□□ -0.93
CCDC113-205ENST00000569374 ALPK3Q96L96 1907 aa9.24□□□□□ -0.93
CCDC113-205ENST00000569374 ADGRA2Q96PE1 1338 aa9.24□□□□□ -0.93
CCDC113-205ENST00000569374 PARP14Q460N5 1801 aa9.24□□□□□ -0.93
CCDC113-205ENST00000569374 FKTNO75072 461 aa9.23□□□□□ -0.93
CCDC113-205ENST00000569374 SURF6O75683 361 aaKnown RBP9.23□□□□□ -0.93
CCDC113-205ENST00000569374 PCBP3P57721 371 aaKnown RBP9.23□□□□□ -0.93
CCDC113-205ENST00000569374 ATP8B2P98198 1209 aa9.23□□□□□ -0.93
CCDC113-205ENST00000569374 PIK3R6Q5UE93 754 aa9.23□□□□□ -0.93
CCDC113-205ENST00000569374 OTOP1Q7RTM1 612 aa9.23□□□□□ -0.93
CCDC113-205ENST00000569374 SPATS2Q86XZ4 545 aaKnown RBP9.23□□□□□ -0.93
CCDC113-205ENST00000569374 FMNL3Q8IVF7 1028 aa9.23□□□□□ -0.93
CCDC113-205ENST00000569374 ZC3H7AQ8IWR0 971 aaKnown RBP9.23□□□□□ -0.93
CCDC113-205ENST00000569374 SH3RF3Q8TEJ3 882 aaPredicted RBP9.23□□□□□ -0.93
CCDC113-205ENST00000569374 HEXIM2Q96MH2 286 aaKnown RBP9.23□□□□□ -0.93
CCDC113-205ENST00000569374 FCRL3Q96P31 734 aaPredicted RBP9.23□□□□□ -0.93
CCDC113-205ENST00000569374 DNAJC18Q9H819 358 aa9.23□□□□□ -0.93
CCDC113-205ENST00000569374 IL1RAPL2Q9NP60 686 aa9.23□□□□□ -0.93
CCDC113-205ENST00000569374 TMOD2Q9NZR1 351 aa9.23□□□□□ -0.93
CCDC113-205ENST00000569374 CHMP5Q9NZZ3 219 aa9.23□□□□□ -0.93
CCDC113-205ENST00000569374 STOML1Q9UBI4 398 aa9.23□□□□□ -0.93
CCDC113-205ENST00000569374 FAN1Q9Y2M0 1017 aa9.23□□□□□ -0.93
CCDC113-205ENST00000569374 TRIM17Q9Y577 477 aa9.23□□□□□ -0.93
CCDC113-205ENST00000569374 PCDHA9Q9Y5H5 950 aa9.23□□□□□ -0.93
CCDC113-205ENST00000569374 NPFFR2Q9Y5X5 522 aa9.23□□□□□ -0.93
CCDC113-205ENST00000569374 PDS5AQ29RF7 1337 aaKnown RBP9.23□□□□□ -0.93
CCDC113-205ENST00000569374 SHISA3A0PJX4 238 aa9.22□□□□□ -0.93
CCDC113-205ENST00000569374 GPR39O43194 453 aa9.22□□□□□ -0.93
CCDC113-205ENST00000569374 PEX10O60683 326 aa9.22□□□□□ -0.93
CCDC113-205ENST00000569374 SRFP11831 508 aa9.22□□□□□ -0.93
CCDC113-205ENST00000569374 VAV1P15498 845 aa9.22□□□□□ -0.93
CCDC113-205ENST00000569374 DYNLL1P63167 89 aaKnown RBP9.22□□□□□ -0.93
CCDC113-205ENST00000569374 FKBP1CQ5VVH2 108 aa9.22□□□□□ -0.93
CCDC113-205ENST00000569374 FRS2Q8WU20 508 aa9.22□□□□□ -0.93
CCDC113-205ENST00000569374 DIO2Q92813 273 aa9.22□□□□□ -0.93
CCDC113-205ENST00000569374 EDC3Q96F86 508 aaKnown RBP9.22□□□□□ -0.93
CCDC113-205ENST00000569374 TCTN2Q96GX1 697 aa9.22□□□□□ -0.93
CCDC113-205ENST00000569374 PUS7LQ9H0K6 701 aaKnown RBP9.22□□□□□ -0.93
CCDC113-205ENST00000569374 DCTPP1Q9H773 170 aa9.22□□□□□ -0.93
CCDC113-205ENST00000569374 GPRC5CQ9NQ84 441 aa9.22□□□□□ -0.93
CCDC113-205ENST00000569374 GNL3LQ9NVN8 582 aaKnown RBP9.22□□□□□ -0.93
CCDC113-205ENST00000569374 RAI14Q9P0K7 980 aa9.22□□□□□ -0.93
CCDC113-205ENST00000569374 SAMD15Q9P1V8 674 aa9.22□□□□□ -0.93
CCDC113-205ENST00000569374 ZNF112Q9UJU3 913 aa9.22□□□□□ -0.93
CCDC113-205ENST00000569374 APOBEC2Q9Y235 224 aaKnown RBP9.22□□□□□ -0.93
CCDC113-205ENST00000569374 FRMPD3Q5JV73 1810 aa9.21□□□□□ -0.93
CCDC113-205ENST00000569374 GPR75-ASB3A0A0A6YYF3 556 aa9.21□□□□□ -0.94
CCDC113-205ENST00000569374 SMIM22K7EJ46 135 aa9.21□□□□□ -0.94
CCDC113-205ENST00000569374 GSTA4O15217 222 aa9.21□□□□□ -0.94
CCDC113-205ENST00000569374 CYP2C8P10632 490 aa9.21□□□□□ -0.94
CCDC113-205ENST00000569374 CYP4F3Q08477 520 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms