RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 NUP62CLQ9H1M0 184 aa17.67■□□□□ 0.42
USB1-215ENST00000569252 MRPL44Q9H9J2 332 aaKnown RBP17.67■□□□□ 0.42
USB1-215ENST00000569252 EXOC1Q9NV70 894 aa17.67■□□□□ 0.42
USB1-215ENST00000569252 K7ERI5 159 aa17.66■□□□□ 0.42
USB1-215ENST00000569252 GPR182O15218 404 aa17.66■□□□□ 0.42
USB1-215ENST00000569252 GPR32O75388 356 aa17.66■□□□□ 0.42
USB1-215ENST00000569252 CHRNA1P02708 482 aa17.66■□□□□ 0.42
USB1-215ENST00000569252 RFC2P35250 354 aa17.66■□□□□ 0.42
USB1-215ENST00000569252 NPTX2P47972 431 aa17.66■□□□□ 0.42
USB1-215ENST00000569252 STRN3Q13033 797 aa17.66■□□□□ 0.42
USB1-215ENST00000569252 PSMD2Q13200 908 aa17.66■□□□□ 0.42
USB1-215ENST00000569252 TMEM132AQ24JP5 1023 aa17.66■□□□□ 0.42
USB1-215ENST00000569252 TRIM71Q2Q1W2 868 aaKnown RBP17.66■□□□□ 0.42
USB1-215ENST00000569252 TMCO2Q7Z6W1 182 aaPredicted RBP17.66■□□□□ 0.42
USB1-215ENST00000569252 GPT2Q8TD30 523 aa17.66■□□□□ 0.42
USB1-215ENST00000569252 SPIRE2Q8WWL2 714 aa17.66■□□□□ 0.42
USB1-215ENST00000569252 WNT8BQ93098 351 aa17.66■□□□□ 0.42
USB1-215ENST00000569252 ZNF668Q96K58 619 aaPredicted RBP17.66■□□□□ 0.42
USB1-215ENST00000569252 OSMRQ99650 979 aa17.66■□□□□ 0.42
USB1-215ENST00000569252 NTPCRQ9BSD7 190 aaKnown RBP17.66■□□□□ 0.42
USB1-215ENST00000569252 GTPBP4Q9BZE4 634 aaKnown RBP17.66■□□□□ 0.42
USB1-215ENST00000569252 PCDHB13Q9Y5F0 798 aa17.66■□□□□ 0.42
USB1-215ENST00000569252 SQORQ9Y6N5 450 aa17.66■□□□□ 0.42
USB1-215ENST00000569252 TET1Q8NFU7 2136 aa17.66■□□□□ 0.42
USB1-215ENST00000569252 INO80B-WBP1J3KQ70 363 aa17.65■□□□□ 0.42
USB1-215ENST00000569252 RPS6KA5O75582 802 aa17.65■□□□□ 0.42
USB1-215ENST00000569252 CA3P07451 260 aa17.65■□□□□ 0.42
USB1-215ENST00000569252 MAPTP10636 758 aaKnown RBP17.65■□□□□ 0.42
USB1-215ENST00000569252 SFPQP23246 707 aaKnown RBP eCLIP17.65■□□□□ 0.42
USB1-215ENST00000569252 CASP1P29466 404 aa17.65■□□□□ 0.42
USB1-215ENST00000569252 ZNF131P52739 623 aa17.65■□□□□ 0.42
USB1-215ENST00000569252 PTENP60484 403 aa17.65■□□□□ 0.42
USB1-215ENST00000569252 PNOCQ13519 176 aa17.65■□□□□ 0.42
USB1-215ENST00000569252 CAPSQ13938 189 aa17.65■□□□□ 0.42
USB1-215ENST00000569252 PCBP1Q15365 356 aaKnown RBP eCLIP17.65■□□□□ 0.42
USB1-215ENST00000569252 SKIV2LQ15477 1246 aaKnown RBP17.65■□□□□ 0.42
USB1-215ENST00000569252 NFKBIZQ9BYH8 718 aa17.65■□□□□ 0.42
USB1-215ENST00000569252 ADAMTS10Q9H324 1103 aa17.65■□□□□ 0.42
USB1-215ENST00000569252 SLC4A7Q9Y6M7 1214 aa17.65■□□□□ 0.42
USB1-215ENST00000569252 K7ENM7 598 aa17.64■□□□□ 0.41
USB1-215ENST00000569252 SLC16A4O15374 487 aa17.64■□□□□ 0.41
USB1-215ENST00000569252 ERLIN2O94905 339 aa17.64■□□□□ 0.41
USB1-215ENST00000569252 KIF20AO95235 890 aa17.64■□□□□ 0.41
USB1-215ENST00000569252 DARSP14868 501 aaKnown RBP17.64■□□□□ 0.41
USB1-215ENST00000569252 DPYDQ12882 1025 aa17.64■□□□□ 0.41
USB1-215ENST00000569252 NFX1Q12986 1120 aaKnown RBP17.64■□□□□ 0.41
USB1-215ENST00000569252 COASYQ13057 564 aa17.64■□□□□ 0.41
USB1-215ENST00000569252 MAPK7Q13164 816 aa17.64■□□□□ 0.41
USB1-215ENST00000569252 PAK2Q13177 524 aa17.64■□□□□ 0.41
USB1-215ENST00000569252 NFKBIBQ15653 356 aa17.64■□□□□ 0.41
USB1-215ENST00000569252 MAPK6Q16659 721 aa17.64■□□□□ 0.41
USB1-215ENST00000569252 CATSPER4Q7RTX7 472 aa17.64■□□□□ 0.41
USB1-215ENST00000569252 DAW1Q8N136 415 aa17.64■□□□□ 0.41
USB1-215ENST00000569252 GSDMAQ96QA5 445 aa17.64■□□□□ 0.41
USB1-215ENST00000569252 CLSTN2Q9H4D0 955 aa17.64■□□□□ 0.41
USB1-215ENST00000569252 PRMT7Q9NVM4 692 aaPredicted RBP17.64■□□□□ 0.41
USB1-215ENST00000569252 TBC1D7Q9P0N9 293 aa17.64■□□□□ 0.41
USB1-215ENST00000569252 PTPRSQ13332 1948 aa17.63■□□□□ 0.41
USB1-215ENST00000569252 TRIP12Q14669 1992 aaPredicted RBP17.63■□□□□ 0.41
USB1-215ENST00000569252 FRMD3A2A2Y4 597 aa17.63■□□□□ 0.41
USB1-215ENST00000569252 GCNT3O95395 438 aa17.63■□□□□ 0.41
USB1-215ENST00000569252 GHRP10912 638 aa17.63■□□□□ 0.41
USB1-215ENST00000569252 BMP1P13497 986 aa17.63■□□□□ 0.41
USB1-215ENST00000569252 ATP2A2P16615 1042 aaKnown RBP17.63■□□□□ 0.41
USB1-215ENST00000569252 MGAT3Q09327 533 aa17.63■□□□□ 0.41
USB1-215ENST00000569252 ALCAMQ13740 583 aa17.63■□□□□ 0.41
USB1-215ENST00000569252 KMT5BQ4FZB7 885 aa17.63■□□□□ 0.41
USB1-215ENST00000569252 TSHZ1Q6ZSZ6 1077 aa17.63■□□□□ 0.41
USB1-215ENST00000569252 FAM43BQ6ZT52 329 aaPredicted RBP17.63■□□□□ 0.41
USB1-215ENST00000569252 HAUS6Q7Z4H7 955 aa17.63■□□□□ 0.41
USB1-215ENST00000569252 SFR1Q86XK3 245 aa17.63■□□□□ 0.41
USB1-215ENST00000569252 SEPT8Q92599 483 aa17.63■□□□□ 0.41
USB1-215ENST00000569252 TMEM134Q9H6X4 195 aa17.63■□□□□ 0.41
USB1-215ENST00000569252 CDHR5Q9HBB8 845 aa17.63■□□□□ 0.41
USB1-215ENST00000569252 EVPLQ92817 2033 aa17.62■□□□□ 0.41
USB1-215ENST00000569252 DENND3A2RUS2 1198 aa17.62■□□□□ 0.41
USB1-215ENST00000569252 PRR29P0C7W0 189 aa17.62■□□□□ 0.41
USB1-215ENST00000569252 ZSCAN20P17040 1043 aaPredicted RBP17.62■□□□□ 0.41
USB1-215ENST00000569252 KCNB1Q14721 858 aa17.62■□□□□ 0.41
USB1-215ENST00000569252 FBXO47Q5MNV8 452 aa17.62■□□□□ 0.41
USB1-215ENST00000569252 FAM26FQ5R3K3 315 aa17.62■□□□□ 0.41
USB1-215ENST00000569252 CCDC183Q5T5S1 534 aa17.62■□□□□ 0.41
USB1-215ENST00000569252 ZNF720Q7Z2F6 126 aa17.62■□□□□ 0.41
USB1-215ENST00000569252 BSNDQ8WZ55 320 aa17.62■□□□□ 0.41
USB1-215ENST00000569252 APBB2Q92870 758 aa17.62■□□□□ 0.41
USB1-215ENST00000569252 IFT122Q9HBG6 1241 aa17.62■□□□□ 0.41
USB1-215ENST00000569252 OLFML3Q9NRN5 406 aa17.62■□□□□ 0.41
USB1-215ENST00000569252 EXOC7Q9UPT5 735 aa17.62■□□□□ 0.41
USB1-215ENST00000569252 NOC2LQ9Y3T9 749 aaKnown RBP17.62■□□□□ 0.41
USB1-215ENST00000569252 PCDHA5Q9Y5H7 936 aa17.62■□□□□ 0.41
USB1-215ENST00000569252 ARID2Q68CP9 1835 aa17.62■□□□□ 0.41
USB1-215ENST00000569252 BRWD1Q9NSI6 2320 aa17.61■□□□□ 0.41
USB1-215ENST00000569252 LETM1O95202 739 aaPredicted RBP17.61■□□□□ 0.41
USB1-215ENST00000569252 PFKMP08237 780 aa17.61■□□□□ 0.41
USB1-215ENST00000569252 ACTN1P12814 892 aa17.61■□□□□ 0.41
USB1-215ENST00000569252 NMT1P30419 496 aaKnown RBP17.61■□□□□ 0.41
USB1-215ENST00000569252 NCKAP1LP55160 1127 aa17.61■□□□□ 0.41
USB1-215ENST00000569252 PRPF4BQ13523 1007 aaKnown RBP17.61■□□□□ 0.41
USB1-215ENST00000569252 LPIN1Q14693 890 aa17.61■□□□□ 0.41
USB1-215ENST00000569252 KLHL40Q2TBA0 621 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms