RNA–Protein interactions for RNA: ENST00000569075.5

TMEM87A-213, Transcript of transmembrane protein 87A, humanhuman

TSL 2

Gene TMEM87A, Length 1,369 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-213ENST00000569075 SMC4Q9NTJ3 1288 aa5.89□□□□□ -1.47
TMEM87A-213ENST00000569075 PDRG1Q9NUG6 133 aa5.89□□□□□ -1.47
TMEM87A-213ENST00000569075 TRMT13Q9NUP7 481 aaKnown RBP5.89□□□□□ -1.47
TMEM87A-213ENST00000569075 COMMD8Q9NX08 183 aa5.89□□□□□ -1.47
TMEM87A-213ENST00000569075 LMCD1Q9NZU5 365 aa5.89□□□□□ -1.47
TMEM87A-213ENST00000569075 PPARGC1AQ9UBK2 798 aaKnown RBP5.89□□□□□ -1.47
TMEM87A-213ENST00000569075 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.89□□□□□ -1.47
TMEM87A-213ENST00000569075 TRHDEQ9UKU6 1024 aa5.89□□□□□ -1.47
TMEM87A-213ENST00000569075 CTNND2Q9UQB3 1225 aa5.89□□□□□ -1.47
TMEM87A-213ENST00000569075 CARMIL3Q8ND23 1372 aa5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 H3BS24 57 aa5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 GABRDO14764 452 aa5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 PLD2O14939 933 aa5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 MAFKO60675 156 aa5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 DDAH1O94760 285 aa5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 SNUPNO95149 360 aaKnown RBP5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 GJB6O95452 261 aa5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 A1BGP04217 495 aa5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 ZKSCAN1P17029 563 aaPredicted RBP5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 VCAM1P19320 739 aa5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 CCND1P24385 295 aa5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 KRT20P35900 424 aa5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 PAPOLAP51003 745 aaKnown RBP5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 PRELPP51888 382 aa5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 LMNB2Q03252 620 aa5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 FSTL1Q12841 308 aa5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 STRN3Q13033 797 aa5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 IFT88Q13099 833 aa5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 STAT4Q14765 748 aa5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 GRM3Q14832 879 aa5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 E2F5Q15329 346 aa5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 PTPN21Q16825 1174 aa5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 CNNM4Q6P4Q7 775 aa5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 ZNF790Q6PG37 636 aa5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 CCDC81Q6ZN84 652 aa5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 GALNT5Q7Z7M9 940 aa5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 LRRTM3Q86VH5 581 aa5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 TTC30AQ86WT1 665 aa5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 TPH2Q8IWU9 490 aa5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 MFSD4AQ8N468 514 aa5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 TAB3Q8N5C8 712 aaPredicted RBP5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 FAM169BQ8N8A8 192 aa5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 SMC1BQ8NDV3 1235 aa5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 LEO1Q8WVC0 666 aaPredicted RBP5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 ZMAT2Q96NC0 199 aaKnown RBP5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 ABCG4Q9H172 646 aa5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 CARS2Q9HA77 564 aaKnown RBP5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 PDP2Q9P2J9 529 aa5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 POLR3KQ9Y2Y1 108 aaPredicted RBP5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 TMX2Q9Y320 296 aa5.88□□□□□ -1.47
TMEM87A-213ENST00000569075 KIAA1551Q9HCM1 1747 aa5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 ZNF503-AS2A6NEH8 195 aa5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 GLTPD2A6NH11 291 aa5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 FAM155AB1AL88 458 aaPredicted RBP5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 KCNQ3O43525 872 aa5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 HTATSF1O43719 755 aaKnown RBP5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 KIF1CO43896 1103 aaKnown RBP5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 GREM1O60565 184 aa5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 C8AP07357 584 aa5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 CCDC175P0C221 793 aa5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 VEGFAP15692 232 aaPredicted RBP5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 PRKAR2BP31323 418 aa5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 HOXD12P35452 270 aa5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 G3BP1Q13283 466 aaKnown RBP eCLIP5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 SLMAPQ14BN4 828 aa5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 TAF3Q5VWG9 929 aa5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 RETSATQ6NUM9 610 aa5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 ZCCHC8Q6NZY4 707 aaKnown RBP5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 XRRA1Q6P2D8 792 aa5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 STRA8Q7Z7C7 330 aa5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 SDCCAG8Q86SQ7 713 aaPredicted RBP5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 C7orf61Q8IZ16 206 aa5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 LRRC47Q8N1G4 583 aaKnown RBP5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 FAM26EQ8N5C1 309 aa5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 LSMEM1Q8N8F7 131 aa5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 MSANTD4Q8NCY6 345 aa5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 FBXO27Q8NI29 283 aa5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 GATAD2BQ8WXI9 593 aa5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 FAM168AQ92567 244 aa5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 UBE2FQ969M7 185 aa5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 HVCN1Q96D96 273 aa5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 HIC2Q96JB3 615 aa5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 FERD3LQ96RJ6 166 aa5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 SPATA9Q9BWV2 254 aa5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 C22orf23Q9BZE7 217 aa5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 DUSP15Q9H1R2 295 aaPredicted RBP5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 DEF6Q9H4E7 631 aa5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 SUDS3Q9H7L9 328 aaPredicted RBP5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 STAP2Q9UGK3 403 aa5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 ADAM30Q9UKF2 790 aa5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 GJD2Q9UKL4 321 aa5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 GIT1Q9Y2X7 761 aa5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 RRP7AQ9Y3A4 280 aaKnown RBP5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 COL5A3P25940 1745 aaPredicted RBP5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 TJP1Q07157 1748 aa5.87□□□□□ -1.47
TMEM87A-213ENST00000569075 HEG1Q9ULI3 1381 aa5.86□□□□□ -1.47
TMEM87A-213ENST00000569075 PRAMEF22A3QJZ6 481 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms