RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 POLGP54098 1239 aaPredicted RBP16.68■□□□□ 0.26
USB1-214ENST00000568848 LETM2Q2VYF4 491 aa16.68■□□□□ 0.26
USB1-214ENST00000568848 B3GNT9Q6UX72 402 aa16.68■□□□□ 0.26
USB1-214ENST00000568848 RIT2Q99578 217 aa16.68■□□□□ 0.26
USB1-214ENST00000568848 NIFKQ9BYG3 293 aaKnown RBP16.68■□□□□ 0.26
USB1-214ENST00000568848 MIOSQ9NXC5 875 aa16.68■□□□□ 0.26
USB1-214ENST00000568848 MED19A0JLT2 244 aaPredicted RBP16.67■□□□□ 0.26
USB1-214ENST00000568848 ZBTB39O15060 712 aa16.67■□□□□ 0.26
USB1-214ENST00000568848 TEX28O15482 410 aa16.67■□□□□ 0.26
USB1-214ENST00000568848 MAFO75444 373 aaPredicted RBP16.67■□□□□ 0.26
USB1-214ENST00000568848 DCNP07585 359 aaKnown RBP16.67■□□□□ 0.26
USB1-214ENST00000568848 GNA11P29992 359 aa16.67■□□□□ 0.26
USB1-214ENST00000568848 NUBP1P53384 320 aa16.67■□□□□ 0.26
USB1-214ENST00000568848 XKR3Q5GH77 459 aa16.67■□□□□ 0.26
USB1-214ENST00000568848 PLCD3Q8N3E9 789 aa16.67■□□□□ 0.26
USB1-214ENST00000568848 KCNG4Q8TDN1 519 aa16.67■□□□□ 0.26
USB1-214ENST00000568848 APOL6Q9BWW8 343 aa16.67■□□□□ 0.26
USB1-214ENST00000568848 EIF2AQ9BY44 585 aaKnown RBP16.67■□□□□ 0.26
USB1-214ENST00000568848 CHST12Q9NRB3 414 aa16.67■□□□□ 0.26
USB1-214ENST00000568848 AGPAT5Q9NUQ2 364 aa16.67■□□□□ 0.26
USB1-214ENST00000568848 SNX14Q9Y5W7 946 aa16.67■□□□□ 0.26
USB1-214ENST00000568848 SPTBN2O15020 2390 aa16.67■□□□□ 0.26
USB1-214ENST00000568848 OTOGLQ3ZCN5 2332 aa16.67■□□□□ 0.26
USB1-214ENST00000568848 CCDC195A0A1B0GUA6 201 aa16.66■□□□□ 0.26
USB1-214ENST00000568848 POTEMA6NI47 508 aa16.66■□□□□ 0.26
USB1-214ENST00000568848 INPPL1O15357 1258 aa16.66■□□□□ 0.26
USB1-214ENST00000568848 RPL17P18621 184 aaKnown RBP16.66■□□□□ 0.26
USB1-214ENST00000568848 HOXA11P31270 313 aaPredicted RBP16.66■□□□□ 0.26
USB1-214ENST00000568848 NLRP5P59047 1200 aa16.66■□□□□ 0.26
USB1-214ENST00000568848 TSGA10IPQ3SY00 556 aa16.66■□□□□ 0.26
USB1-214ENST00000568848 OTOP3Q7RTS5 596 aa16.66■□□□□ 0.26
USB1-214ENST00000568848 CDR2LQ86X02 465 aaPredicted RBP16.66■□□□□ 0.26
USB1-214ENST00000568848 PALB2Q86YC2 1186 aa16.66■□□□□ 0.26
USB1-214ENST00000568848 KIAA2013Q8IYS2 634 aa16.66■□□□□ 0.26
USB1-214ENST00000568848 DCLK2Q8N568 766 aa16.66■□□□□ 0.26
USB1-214ENST00000568848 SMG8Q8ND04 991 aaKnown RBP16.66■□□□□ 0.26
USB1-214ENST00000568848 ETNPPLQ8TBG4 499 aa16.66■□□□□ 0.26
USB1-214ENST00000568848 ACSF2Q96CM8 615 aaPredicted RBP16.66■□□□□ 0.26
USB1-214ENST00000568848 RMDN1Q96DB5 314 aa16.66■□□□□ 0.26
USB1-214ENST00000568848 CPB2Q96IY4 423 aa16.66■□□□□ 0.26
USB1-214ENST00000568848 ZFP42Q96MM3 310 aa16.66■□□□□ 0.26
USB1-214ENST00000568848 RSAD1Q9HA92 442 aa16.66■□□□□ 0.26
USB1-214ENST00000568848 FAN1Q9Y2M0 1017 aa16.66■□□□□ 0.26
USB1-214ENST00000568848 NID2Q14112 1375 aa16.65■□□□□ 0.26
USB1-214ENST00000568848 CACNA1IQ9P0X4 2223 aa16.65■□□□□ 0.26
USB1-214ENST00000568848 SFNP31947 248 aa16.65■□□□□ 0.26
USB1-214ENST00000568848 OR1G1P47890 313 aa16.65■□□□□ 0.26
USB1-214ENST00000568848 AKAP17AQ02040 695 aaKnown RBP16.65■□□□□ 0.26
USB1-214ENST00000568848 BMS1Q14692 1282 aaKnown RBP16.65■□□□□ 0.26
USB1-214ENST00000568848 NPY5RQ15761 445 aa16.65■□□□□ 0.26
USB1-214ENST00000568848 GET4Q7L5D6 327 aaPredicted RBP16.65■□□□□ 0.26
USB1-214ENST00000568848 TEX2Q8IWB9 1127 aa16.65■□□□□ 0.26
USB1-214ENST00000568848 URGCPQ8TCY9 931 aa16.65■□□□□ 0.26
USB1-214ENST00000568848 GPR152Q8TDT2 470 aa16.65■□□□□ 0.26
USB1-214ENST00000568848 CCDC12Q8WUD4 166 aaPredicted RBP16.65■□□□□ 0.26
USB1-214ENST00000568848 PRPF31Q8WWY3 499 aaKnown RBP16.65■□□□□ 0.26
USB1-214ENST00000568848 ZNF707Q96C28 371 aaPredicted RBP16.65■□□□□ 0.26
USB1-214ENST00000568848 GAD1Q99259 594 aa16.65■□□□□ 0.26
USB1-214ENST00000568848 RPP25Q9BUL9 199 aaKnown RBP16.65■□□□□ 0.26
USB1-214ENST00000568848 TRAIPQ9BWF2 469 aa16.65■□□□□ 0.26
USB1-214ENST00000568848 EMILIN2Q9BXX0 1053 aa16.65■□□□□ 0.26
USB1-214ENST00000568848 FOXQ1Q9C009 403 aa16.65■□□□□ 0.26
USB1-214ENST00000568848 TBC1D17Q9HA65 648 aa16.65■□□□□ 0.26
USB1-214ENST00000568848 GJB4Q9NTQ9 266 aa16.65■□□□□ 0.26
USB1-214ENST00000568848 COL4A3BPQ9Y5P4 624 aa16.65■□□□□ 0.26
USB1-214ENST00000568848 A0A087WWV3 80 aa16.64■□□□□ 0.25
USB1-214ENST00000568848 ZNF623O75123 536 aa16.64■□□□□ 0.25
USB1-214ENST00000568848 MLH1P40692 756 aa16.64■□□□□ 0.25
USB1-214ENST00000568848 DNM2P50570 870 aa16.64■□□□□ 0.25
USB1-214ENST00000568848 SCNN1GP51170 649 aa16.64■□□□□ 0.25
USB1-214ENST00000568848 NTHL1P78549 312 aa16.64■□□□□ 0.25
USB1-214ENST00000568848 INF2Q27J81 1249 aa16.64■□□□□ 0.25
USB1-214ENST00000568848 Q4G0T1 1027 aa16.64■□□□□ 0.25
USB1-214ENST00000568848 BMP2KLQ5H9B9 411 aa16.64■□□□□ 0.25
USB1-214ENST00000568848 FAM43BQ6ZT52 329 aaPredicted RBP16.64■□□□□ 0.25
USB1-214ENST00000568848 ZNF410Q86VK4 478 aa16.64■□□□□ 0.25
USB1-214ENST00000568848 FAM193BQ96PV7 902 aaPredicted RBP16.64■□□□□ 0.25
USB1-214ENST00000568848 HERC2P3Q9BVR0 1158 aa16.64■□□□□ 0.25
USB1-214ENST00000568848 MRPL17Q9NRX2 175 aaKnown RBP16.64■□□□□ 0.25
USB1-214ENST00000568848 VAV3Q9UKW4 847 aa16.64■□□□□ 0.25
USB1-214ENST00000568848 KCNJ14Q9UNX9 436 aa16.64■□□□□ 0.25
USB1-214ENST00000568848 CLUHO75153 1309 aa16.64■□□□□ 0.25
USB1-214ENST00000568848 ARID2Q68CP9 1835 aa16.63■□□□□ 0.25
USB1-214ENST00000568848 CCDC196A0A1B0GTZ2 297 aa16.63■□□□□ 0.25
USB1-214ENST00000568848 SOD2P04179 222 aa16.63■□□□□ 0.25
USB1-214ENST00000568848 URODP06132 367 aa16.63■□□□□ 0.25
USB1-214ENST00000568848 GLULP15104 373 aa16.63■□□□□ 0.25
USB1-214ENST00000568848 RPS6KB1P23443 525 aa16.63■□□□□ 0.25
USB1-214ENST00000568848 PDIA3P30101 505 aaKnown RBP16.63■□□□□ 0.25
USB1-214ENST00000568848 USP11P51784 963 aa16.63■□□□□ 0.25
USB1-214ENST00000568848 RCAN1P53805 252 aa16.63■□□□□ 0.25
USB1-214ENST00000568848 LAMTOR4Q0VGL1 99 aa16.63■□□□□ 0.25
USB1-214ENST00000568848 GIT2Q14161 759 aa16.63■□□□□ 0.25
USB1-214ENST00000568848 BLOC1S2Q6QNY1 142 aa16.63■□□□□ 0.25
USB1-214ENST00000568848 MRPL10Q7Z7H8 261 aaKnown RBP16.63■□□□□ 0.25
USB1-214ENST00000568848 PPFIBP1Q86W92 1011 aa16.63■□□□□ 0.25
USB1-214ENST00000568848 COLGALT2Q8IYK4 626 aa16.63■□□□□ 0.25
USB1-214ENST00000568848 SLC44A3Q8N4M1 653 aa16.63■□□□□ 0.25
USB1-214ENST00000568848 CCDC148Q8NFR7 591 aa16.63■□□□□ 0.25
USB1-214ENST00000568848 BICD2Q8TD16 824 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms