RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 FOXD4L5Q5VV16 416 aaPredicted RBP14.33□□□□□ -0.12
TSC2-220ENST00000568238 TMC7Q7Z402 723 aa14.33□□□□□ -0.12
TSC2-220ENST00000568238 VN1R2Q8NFZ6 395 aa14.33□□□□□ -0.12
TSC2-220ENST00000568238 FOXD4L4Q8WXT5 416 aaPredicted RBP14.33□□□□□ -0.12
TSC2-220ENST00000568238 PGBD4Q96DM1 585 aa14.33□□□□□ -0.12
TSC2-220ENST00000568238 TMEM169Q96HH4 297 aa14.33□□□□□ -0.12
TSC2-220ENST00000568238 LRFN3Q9BTN0 628 aa14.33□□□□□ -0.12
TSC2-220ENST00000568238 MINDY3Q9H8M7 445 aa14.33□□□□□ -0.12
TSC2-220ENST00000568238 C11orf16Q9NQ32 467 aa14.33□□□□□ -0.12
TSC2-220ENST00000568238 XPNPEP1Q9NQW7 623 aa14.33□□□□□ -0.12
TSC2-220ENST00000568238 ANKEF1Q9NU02 776 aa14.33□□□□□ -0.12
TSC2-220ENST00000568238 DAXXQ9UER7 740 aaPredicted RBP14.33□□□□□ -0.12
TSC2-220ENST00000568238 RAPGEFL1Q9UHV5 662 aa14.33□□□□□ -0.12
TSC2-220ENST00000568238 INPP5FQ9Y2H2 1132 aa14.33□□□□□ -0.12
TSC2-220ENST00000568238 PCDHB2Q9Y5E7 798 aa14.33□□□□□ -0.12
TSC2-220ENST00000568238 TDRD15B5MCY1 1934 aaKnown RBP14.33□□□□□ -0.12
TSC2-220ENST00000568238 HIDE1A8MVS5 230 aa14.32□□□□□ -0.12
TSC2-220ENST00000568238 DCXO43602 365 aa14.32□□□□□ -0.12
TSC2-220ENST00000568238 GPR37L1O60883 481 aa14.32□□□□□ -0.12
TSC2-220ENST00000568238 ERLIN2O94905 339 aa14.32□□□□□ -0.12
TSC2-220ENST00000568238 RNASELQ05823 741 aaKnown RBP14.32□□□□□ -0.12
TSC2-220ENST00000568238 TFDP1Q14186 410 aa14.32□□□□□ -0.12
TSC2-220ENST00000568238 SMC1AQ14683 1233 aaKnown RBP14.32□□□□□ -0.12
TSC2-220ENST00000568238 PCBP1Q15365 356 aaKnown RBP eCLIP14.32□□□□□ -0.12
TSC2-220ENST00000568238 NOMO2Q5JPE7 1267 aa14.32□□□□□ -0.12
TSC2-220ENST00000568238 TTC38Q5R3I4 469 aa14.32□□□□□ -0.12
TSC2-220ENST00000568238 URGCPQ8TCY9 931 aa14.32□□□□□ -0.12
TSC2-220ENST00000568238 TMEM60Q9H2L4 133 aa14.32□□□□□ -0.12
TSC2-220ENST00000568238 TBC1D13Q9NVG8 400 aa14.32□□□□□ -0.12
TSC2-220ENST00000568238 USP15Q9Y4E8 981 aaPredicted RBP14.32□□□□□ -0.12
TSC2-220ENST00000568238 NT5C1B-RDH14C9J2C7 533 aa14.31□□□□□ -0.12
TSC2-220ENST00000568238 OFD1O75665 1012 aa14.31□□□□□ -0.12
TSC2-220ENST00000568238 TRAPPC10P48553 1259 aa14.31□□□□□ -0.12
TSC2-220ENST00000568238 RARRES1P49788 294 aa14.31□□□□□ -0.12
TSC2-220ENST00000568238 PTENP60484 403 aa14.31□□□□□ -0.12
TSC2-220ENST00000568238 RBM10P98175 930 aaKnown RBP14.31□□□□□ -0.12
TSC2-220ENST00000568238 RESTQ13127 1097 aa14.31□□□□□ -0.12
TSC2-220ENST00000568238 ORC2Q13416 577 aaPredicted RBP14.31□□□□□ -0.12
TSC2-220ENST00000568238 PKP1Q13835 747 aa14.31□□□□□ -0.12
TSC2-220ENST00000568238 BMS1Q14692 1282 aaKnown RBP14.31□□□□□ -0.12
TSC2-220ENST00000568238 ZNF174Q15697 407 aa14.31□□□□□ -0.12
TSC2-220ENST00000568238 BRAPQ7Z569 592 aa14.31□□□□□ -0.12
TSC2-220ENST00000568238 TMEM173Q86WV6 379 aaPredicted RBP14.31□□□□□ -0.12
TSC2-220ENST00000568238 RSAD1Q9HA92 442 aa14.31□□□□□ -0.12
TSC2-220ENST00000568238 RBM19Q9Y4C8 960 aaKnown RBP14.31□□□□□ -0.12
TSC2-220ENST00000568238 CNTNAP2Q9UHC6 1331 aa14.31□□□□□ -0.12
TSC2-220ENST00000568238 INO80B-WBP1J3KQ70 363 aa14.3□□□□□ -0.12
TSC2-220ENST00000568238 TSPAN1O60635 241 aa14.3□□□□□ -0.12
TSC2-220ENST00000568238 USO1O60763 962 aaKnown RBP14.3□□□□□ -0.12
TSC2-220ENST00000568238 OR52Z1P0C646 297 aa14.3□□□□□ -0.12
TSC2-220ENST00000568238 AXLP30530 894 aa14.3□□□□□ -0.12
TSC2-220ENST00000568238 HOXA11P31270 313 aaPredicted RBP14.3□□□□□ -0.12
TSC2-220ENST00000568238 CA8P35219 290 aa14.3□□□□□ -0.12
TSC2-220ENST00000568238 TOB1P50616 345 aaPredicted RBP14.3□□□□□ -0.12
TSC2-220ENST00000568238 CAPSQ13938 189 aa14.3□□□□□ -0.12
TSC2-220ENST00000568238 UBXN11Q5T124 520 aa14.3□□□□□ -0.12
TSC2-220ENST00000568238 LLGL2Q6P1M3 1020 aa14.3□□□□□ -0.12
TSC2-220ENST00000568238 NOTUMQ6P988 496 aa14.3□□□□□ -0.12
TSC2-220ENST00000568238 TMEM184AQ6ZMB5 413 aa14.3□□□□□ -0.12
TSC2-220ENST00000568238 AGMOQ6ZNB7 445 aa14.3□□□□□ -0.12
TSC2-220ENST00000568238 ASAP3Q8TDY4 903 aa14.3□□□□□ -0.12
TSC2-220ENST00000568238 PIGOQ8TEQ8 1089 aa14.3□□□□□ -0.12
TSC2-220ENST00000568238 CCDC51Q96ER9 411 aa14.3□□□□□ -0.12
TSC2-220ENST00000568238 GBP3Q9H0R5 595 aa14.3□□□□□ -0.12
TSC2-220ENST00000568238 POLR3FQ9H1D9 316 aaPredicted RBP14.3□□□□□ -0.12
TSC2-220ENST00000568238 NRDE2Q9H7Z3 1164 aa14.3□□□□□ -0.12
TSC2-220ENST00000568238 TUFT1Q9NNX1 390 aa14.3□□□□□ -0.12
TSC2-220ENST00000568238 HCN4Q9Y3Q4 1203 aa14.3□□□□□ -0.12
TSC2-220ENST00000568238 MUC6Q6W4X9 2439 aa14.29□□□□□ -0.12
TSC2-220ENST00000568238 C2orf71A6NGG8 1288 aa14.29□□□□□ -0.12
TSC2-220ENST00000568238 ZSCAN22P10073 491 aaPredicted RBP14.29□□□□□ -0.12
TSC2-220ENST00000568238 NCLP19338 710 aaKnown RBP14.29□□□□□ -0.12
TSC2-220ENST00000568238 ARL2P36404 184 aa14.29□□□□□ -0.12
TSC2-220ENST00000568238 TECP42680 631 aa14.29□□□□□ -0.12
TSC2-220ENST00000568238 MBTD1Q05BQ5 628 aa14.29□□□□□ -0.12
TSC2-220ENST00000568238 POU5F1BQ06416 359 aa14.29□□□□□ -0.12
TSC2-220ENST00000568238 NCBP1Q09161 790 aaKnown RBP14.29□□□□□ -0.12
TSC2-220ENST00000568238 KCNC3Q14003 757 aa14.29□□□□□ -0.12
TSC2-220ENST00000568238 RILPL1Q5EBL4 403 aa14.29□□□□□ -0.12
TSC2-220ENST00000568238 ANKRD54Q6NXT1 300 aa14.29□□□□□ -0.12
TSC2-220ENST00000568238 FAM173BQ6P4H8 233 aa14.29□□□□□ -0.12
TSC2-220ENST00000568238 MRPL10Q7Z7H8 261 aaKnown RBP14.29□□□□□ -0.12
TSC2-220ENST00000568238 IFNLR1Q8IU57 520 aaPredicted RBP14.29□□□□□ -0.12
TSC2-220ENST00000568238 VPS52Q8N1B4 723 aa14.29□□□□□ -0.12
TSC2-220ENST00000568238 MRPL43Q8N983 215 aaKnown RBP14.29□□□□□ -0.12
TSC2-220ENST00000568238 CNNM3Q8NE01 707 aa14.29□□□□□ -0.12
TSC2-220ENST00000568238 ERMNQ8TAM6 284 aa14.29□□□□□ -0.12
TSC2-220ENST00000568238 IGSF21Q96ID5 467 aa14.29□□□□□ -0.12
TSC2-220ENST00000568238 NFKBIZQ9BYH8 718 aa14.29□□□□□ -0.12
TSC2-220ENST00000568238 ZBP1Q9H171 429 aa14.29□□□□□ -0.12
TSC2-220ENST00000568238 PCDHB6Q9Y5E3 794 aa14.29□□□□□ -0.12
TSC2-220ENST00000568238 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.28□□□□□ -0.12
TSC2-220ENST00000568238 PRR33A8MZF0 331 aa14.28□□□□□ -0.12
TSC2-220ENST00000568238 MED24O75448 989 aa14.28□□□□□ -0.12
TSC2-220ENST00000568238 GALTP07902 379 aa14.28□□□□□ -0.12
TSC2-220ENST00000568238 SPATA31C1P0DKV0 1188 aa14.28□□□□□ -0.12
TSC2-220ENST00000568238 XRCC6P12956 609 aaKnown RBP eCLIP14.28□□□□□ -0.12
TSC2-220ENST00000568238 GLRA2P23416 452 aa14.28□□□□□ -0.12
TSC2-220ENST00000568238 SLC11A1P49279 550 aa14.28□□□□□ -0.12
TSC2-220ENST00000568238 FOXD4L6Q3SYB3 417 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms