RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 PAN2Q504Q3 1202 aaKnown RBP12.42□□□□□ -0.42
CDH3-206ENST00000567674 NOMO2Q5JPE7 1267 aa12.42□□□□□ -0.42
CDH3-206ENST00000567674 CLLU1OSQ5K130 101 aa12.42□□□□□ -0.42
CDH3-206ENST00000567674 PTCRAQ6ISU1 281 aaPredicted RBP12.42□□□□□ -0.42
CDH3-206ENST00000567674 LRRC55Q6ZSA7 311 aa12.42□□□□□ -0.42
CDH3-206ENST00000567674 SLC39A11Q8N1S5 342 aa12.42□□□□□ -0.42
CDH3-206ENST00000567674 ZNF579Q8NAF0 562 aaKnown RBP12.42□□□□□ -0.42
CDH3-206ENST00000567674 URGCPQ8TCY9 931 aa12.42□□□□□ -0.42
CDH3-206ENST00000567674 KIFAP3Q92845 792 aa12.42□□□□□ -0.42
CDH3-206ENST00000567674 CSRNP2Q9H175 543 aa12.42□□□□□ -0.42
CDH3-206ENST00000567674 PRMT7Q9NVM4 692 aaPredicted RBP12.42□□□□□ -0.42
CDH3-206ENST00000567674 LRWD1Q9UFC0 647 aa12.42□□□□□ -0.42
CDH3-206ENST00000567674 GIT1Q9Y2X7 761 aa12.42□□□□□ -0.42
CDH3-206ENST00000567674 PCDHB2Q9Y5E7 798 aa12.42□□□□□ -0.42
CDH3-206ENST00000567674 WDFY4Q6ZS81 3184 aa12.41□□□□□ -0.42
CDH3-206ENST00000567674 NR1I2O75469 434 aa12.41□□□□□ -0.42
CDH3-206ENST00000567674 ALDH2P05091 517 aa12.41□□□□□ -0.42
CDH3-206ENST00000567674 ATP2B1P20020 1258 aa12.41□□□□□ -0.42
CDH3-206ENST00000567674 LTBRP36941 435 aa12.41□□□□□ -0.42
CDH3-206ENST00000567674 NAMPTP43490 491 aa12.41□□□□□ -0.42
CDH3-206ENST00000567674 SMAD4Q13485 552 aaKnown RBP12.41□□□□□ -0.42
CDH3-206ENST00000567674 ZNF174Q15697 407 aa12.41□□□□□ -0.42
CDH3-206ENST00000567674 DUSP6Q16828 381 aa12.41□□□□□ -0.42
CDH3-206ENST00000567674 HYIQ5T013 277 aa12.41□□□□□ -0.42
CDH3-206ENST00000567674 KRT79Q5XKE5 535 aa12.41□□□□□ -0.42
CDH3-206ENST00000567674 CDCA2Q69YH5 1023 aaPredicted RBP12.41□□□□□ -0.42
CDH3-206ENST00000567674 DTHD1Q6ZMT9 781 aa12.41□□□□□ -0.42
CDH3-206ENST00000567674 APBB1IPQ7Z5R6 666 aaPredicted RBP12.41□□□□□ -0.42
CDH3-206ENST00000567674 DDX53Q86TM3 631 aaKnown RBP12.41□□□□□ -0.42
CDH3-206ENST00000567674 KSR1Q8IVT5 923 aa12.41□□□□□ -0.42
CDH3-206ENST00000567674 ZBTB8OSQ8IWT0 167 aa12.41□□□□□ -0.42
CDH3-206ENST00000567674 MRPL43Q8N983 215 aaKnown RBP12.41□□□□□ -0.42
CDH3-206ENST00000567674 KCNN1Q92952 543 aa12.41□□□□□ -0.42
CDH3-206ENST00000567674 MSLNLQ96KJ4 702 aa12.41□□□□□ -0.42
CDH3-206ENST00000567674 AK8Q96MA6 479 aa12.41□□□□□ -0.42
CDH3-206ENST00000567674 PPP1R16BQ96T49 567 aa12.41□□□□□ -0.42
CDH3-206ENST00000567674 SH2D3AQ9BRG2 576 aa12.41□□□□□ -0.42
CDH3-206ENST00000567674 NT5C3AQ9H0P0 336 aa12.41□□□□□ -0.42
CDH3-206ENST00000567674 FZD8Q9H461 694 aa12.41□□□□□ -0.42
CDH3-206ENST00000567674 TLE6Q9H808 572 aa12.41□□□□□ -0.42
CDH3-206ENST00000567674 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.41□□□□□ -0.42
CDH3-206ENST00000567674 CLDND1Q9NY35 253 aa12.41□□□□□ -0.42
CDH3-206ENST00000567674 DPP7Q9UHL4 492 aa12.41□□□□□ -0.42
CDH3-206ENST00000567674 DNM3Q9UQ16 869 aa12.41□□□□□ -0.42
CDH3-206ENST00000567674 POTEMA6NI47 508 aa12.4□□□□□ -0.42
CDH3-206ENST00000567674 C19orf67A6NJJ6 358 aa12.4□□□□□ -0.42
CDH3-206ENST00000567674 H3BQV1 296 aa12.4□□□□□ -0.42
CDH3-206ENST00000567674 TSPAN1O60635 241 aa12.4□□□□□ -0.42
CDH3-206ENST00000567674 MED24O75448 989 aa12.4□□□□□ -0.42
CDH3-206ENST00000567674 GLRA2P23416 452 aa12.4□□□□□ -0.42
CDH3-206ENST00000567674 DNAJB1P25685 340 aa12.4□□□□□ -0.42
CDH3-206ENST00000567674 GUCY1B3Q02153 619 aa12.4□□□□□ -0.42
CDH3-206ENST00000567674 MBTD1Q05BQ5 628 aa12.4□□□□□ -0.42
CDH3-206ENST00000567674 PTGDRQ13258 359 aa12.4□□□□□ -0.42
CDH3-206ENST00000567674 CUL4AQ13619 759 aa12.4□□□□□ -0.42
CDH3-206ENST00000567674 CAPSQ13938 189 aa12.4□□□□□ -0.42
CDH3-206ENST00000567674 KCNC3Q14003 757 aa12.4□□□□□ -0.42
CDH3-206ENST00000567674 SMC1AQ14683 1233 aaKnown RBP12.4□□□□□ -0.42
CDH3-206ENST00000567674 SLC27A1Q6PCB7 646 aa12.4□□□□□ -0.42
CDH3-206ENST00000567674 BRAPQ7Z569 592 aa12.4□□□□□ -0.42
CDH3-206ENST00000567674 PPFIBP1Q86W92 1011 aa12.4□□□□□ -0.42
CDH3-206ENST00000567674 ADHFE1Q8IWW8 467 aa12.4□□□□□ -0.42
CDH3-206ENST00000567674 SMRP1Q8NCR6 262 aa12.4□□□□□ -0.42
CDH3-206ENST00000567674 MICAL1Q8TDZ2 1067 aa12.4□□□□□ -0.42
CDH3-206ENST00000567674 TMEM169Q96HH4 297 aa12.4□□□□□ -0.42
CDH3-206ENST00000567674 INTS4Q96HW7 963 aaKnown RBP12.4□□□□□ -0.42
CDH3-206ENST00000567674 IFT74Q96LB3 600 aa12.4□□□□□ -0.42
CDH3-206ENST00000567674 MINDY3Q9H8M7 445 aa12.4□□□□□ -0.42
CDH3-206ENST00000567674 RSAD1Q9HA92 442 aa12.4□□□□□ -0.42
CDH3-206ENST00000567674 CD207Q9UJ71 328 aa12.4□□□□□ -0.42
CDH3-206ENST00000567674 SMC3Q9UQE7 1217 aa12.4□□□□□ -0.42
CDH3-206ENST00000567674 RBM19Q9Y4C8 960 aaKnown RBP12.4□□□□□ -0.42
CDH3-206ENST00000567674 ARHGEF35A5YM69 484 aa12.39□□□□□ -0.43
CDH3-206ENST00000567674 INO80B-WBP1J3KQ70 363 aa12.39□□□□□ -0.43
CDH3-206ENST00000567674 WNT7AO00755 349 aa12.39□□□□□ -0.43
CDH3-206ENST00000567674 ZBTB39O15060 712 aa12.39□□□□□ -0.43
CDH3-206ENST00000567674 GALTP07902 379 aa12.39□□□□□ -0.43
CDH3-206ENST00000567674 ITGA4P13612 1032 aa12.39□□□□□ -0.43
CDH3-206ENST00000567674 FGFR4P22455 802 aa12.39□□□□□ -0.43
CDH3-206ENST00000567674 GJB2P29033 226 aa12.39□□□□□ -0.43
CDH3-206ENST00000567674 SSTR3P32745 418 aaPredicted RBP12.39□□□□□ -0.43
CDH3-206ENST00000567674 ABCD1P33897 745 aa12.39□□□□□ -0.43
CDH3-206ENST00000567674 GATMP50440 423 aa12.39□□□□□ -0.43
CDH3-206ENST00000567674 TOB1P50616 345 aaPredicted RBP12.39□□□□□ -0.43
CDH3-206ENST00000567674 BCAR1P56945 870 aa12.39□□□□□ -0.43
CDH3-206ENST00000567674 ATP2C1P98194 919 aaPredicted RBP12.39□□□□□ -0.43
CDH3-206ENST00000567674 MAPK6Q16659 721 aa12.39□□□□□ -0.43
CDH3-206ENST00000567674 AMHR2Q16671 573 aa12.39□□□□□ -0.43
CDH3-206ENST00000567674 UBXN11Q5T124 520 aa12.39□□□□□ -0.43
CDH3-206ENST00000567674 PADI6Q6TGC4 694 aa12.39□□□□□ -0.43
CDH3-206ENST00000567674 AGMOQ6ZNB7 445 aa12.39□□□□□ -0.43
CDH3-206ENST00000567674 TMC7Q7Z402 723 aa12.39□□□□□ -0.43
CDH3-206ENST00000567674 HELQQ8TDG4 1101 aa12.39□□□□□ -0.43
CDH3-206ENST00000567674 PIGOQ8TEQ8 1089 aa12.39□□□□□ -0.43
CDH3-206ENST00000567674 IGSF21Q96ID5 467 aa12.39□□□□□ -0.43
CDH3-206ENST00000567674 NTPCRQ9BSD7 190 aaKnown RBP12.39□□□□□ -0.43
CDH3-206ENST00000567674 TBC1D13Q9NVG8 400 aa12.39□□□□□ -0.43
CDH3-206ENST00000567674 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.39□□□□□ -0.43
CDH3-206ENST00000567674 MORC2Q9Y6X9 1032 aaPredicted RBP12.39□□□□□ -0.43
CDH3-206ENST00000567674 ACKR2O00590 384 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms