RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.84□□□□□ -0.03
CLK3-218ENST00000566926 FSIP1Q8NA03 581 aa14.84□□□□□ -0.03
CLK3-218ENST00000566926 RNF169Q8NCN4 708 aa14.84□□□□□ -0.03
CLK3-218ENST00000566926 CNNM3Q8NE01 707 aa14.84□□□□□ -0.03
CLK3-218ENST00000566926 ASAP3Q8TDY4 903 aa14.84□□□□□ -0.03
CLK3-218ENST00000566926 KIFAP3Q92845 792 aa14.84□□□□□ -0.03
CLK3-218ENST00000566926 MRPL38Q96DV4 380 aaKnown RBP14.84□□□□□ -0.03
CLK3-218ENST00000566926 CCDC51Q96ER9 411 aa14.84□□□□□ -0.03
CLK3-218ENST00000566926 CCDC34Q96HJ3 373 aa14.84□□□□□ -0.03
CLK3-218ENST00000566926 IFT74Q96LB3 600 aa14.84□□□□□ -0.03
CLK3-218ENST00000566926 C2orf40Q9H1Z8 148 aa14.84□□□□□ -0.03
CLK3-218ENST00000566926 FAM105AQ9NUU6 356 aa14.84□□□□□ -0.03
CLK3-218ENST00000566926 PCDHB12Q9Y5F1 795 aa14.84□□□□□ -0.03
CLK3-218ENST00000566926 MRPL42Q9Y6G3 142 aaKnown RBP14.84□□□□□ -0.03
CLK3-218ENST00000566926 LRRIQ4A6NIV6 560 aa14.83□□□□□ -0.04
CLK3-218ENST00000566926 PP2D1A8MPX8 630 aa14.83□□□□□ -0.04
CLK3-218ENST00000566926 KINO60870 393 aaKnown RBP14.83□□□□□ -0.04
CLK3-218ENST00000566926 FGFR1P11362 822 aa14.83□□□□□ -0.04
CLK3-218ENST00000566926 CDC25AP30304 524 aa14.83□□□□□ -0.04
CLK3-218ENST00000566926 LONP1P36776 959 aaKnown RBP14.83□□□□□ -0.04
CLK3-218ENST00000566926 UBA7P41226 1012 aa14.83□□□□□ -0.04
CLK3-218ENST00000566926 NAMPTP43490 491 aa14.83□□□□□ -0.04
CLK3-218ENST00000566926 ZRSR1Q15695 479 aaKnown RBP14.83□□□□□ -0.04
CLK3-218ENST00000566926 RESP18Q5W5W9 173 aa14.83□□□□□ -0.04
CLK3-218ENST00000566926 CAVIN1Q6NZI2 390 aaKnown RBP14.83□□□□□ -0.04
CLK3-218ENST00000566926 NOTUMQ6P988 496 aa14.83□□□□□ -0.04
CLK3-218ENST00000566926 ZNF598Q86UK7 904 aaKnown RBP14.83□□□□□ -0.04
CLK3-218ENST00000566926 CALML4Q96GE6 196 aa14.83□□□□□ -0.04
CLK3-218ENST00000566926 MMTAG2Q9BU76 263 aaKnown RBP14.83□□□□□ -0.04
CLK3-218ENST00000566926 TIPINQ9BVW5 301 aa14.83□□□□□ -0.04
CLK3-218ENST00000566926 MRPL9Q9BYD2 267 aaKnown RBP14.83□□□□□ -0.04
CLK3-218ENST00000566926 MINDY3Q9H8M7 445 aa14.83□□□□□ -0.04
CLK3-218ENST00000566926 PRMT7Q9NVM4 692 aaPredicted RBP14.83□□□□□ -0.04
CLK3-218ENST00000566926 KCNG1Q9UIX4 513 aa14.83□□□□□ -0.04
CLK3-218ENST00000566926 TDRD15B5MCY1 1934 aaKnown RBP14.83□□□□□ -0.04
CLK3-218ENST00000566926 PLXNA4Q9HCM2 1894 aa14.82□□□□□ -0.04
CLK3-218ENST00000566926 BRWD1Q9NSI6 2320 aa14.82□□□□□ -0.04
CLK3-218ENST00000566926 E9PMD0 336 aa14.82□□□□□ -0.04
CLK3-218ENST00000566926 LINC00271P0C7V0 271 aa14.82□□□□□ -0.04
CLK3-218ENST00000566926 LAG3P18627 525 aa14.82□□□□□ -0.04
CLK3-218ENST00000566926 TXLNAP40222 546 aa14.82□□□□□ -0.04
CLK3-218ENST00000566926 GATMP50440 423 aa14.82□□□□□ -0.04
CLK3-218ENST00000566926 MBTD1Q05BQ5 628 aa14.82□□□□□ -0.04
CLK3-218ENST00000566926 SKIV2LQ15477 1246 aaKnown RBP14.82□□□□□ -0.04
CLK3-218ENST00000566926 TIGD5Q53EQ6 642 aa14.82□□□□□ -0.04
CLK3-218ENST00000566926 CABP7Q86V35 215 aa14.82□□□□□ -0.04
CLK3-218ENST00000566926 LRRC43Q8N309 656 aa14.82□□□□□ -0.04
CLK3-218ENST00000566926 DEPTORQ8TB45 409 aa14.82□□□□□ -0.04
CLK3-218ENST00000566926 PRIMPOLQ96LW4 560 aa14.82□□□□□ -0.04
CLK3-218ENST00000566926 CASD1Q96PB1 797 aa14.82□□□□□ -0.04
CLK3-218ENST00000566926 UBN1Q9NPG3 1134 aa14.82□□□□□ -0.04
CLK3-218ENST00000566926 GPRC5CQ9NQ84 441 aa14.82□□□□□ -0.04
CLK3-218ENST00000566926 ATG2AQ2TAZ0 1938 aa14.82□□□□□ -0.04
CLK3-218ENST00000566926 HOXA11P31270 313 aaPredicted RBP14.81□□□□□ -0.04
CLK3-218ENST00000566926 EFNA5P52803 228 aa14.81□□□□□ -0.04
CLK3-218ENST00000566926 UBE3AQ05086 875 aa14.81□□□□□ -0.04
CLK3-218ENST00000566926 CDCA2Q69YH5 1023 aaPredicted RBP14.81□□□□□ -0.04
CLK3-218ENST00000566926 GLB1LQ6UWU2 654 aa14.81□□□□□ -0.04
CLK3-218ENST00000566926 MRPL10Q7Z7H8 261 aaKnown RBP14.81□□□□□ -0.04
CLK3-218ENST00000566926 HACE1Q8IYU2 909 aa14.81□□□□□ -0.04
CLK3-218ENST00000566926 HELQQ8TDG4 1101 aa14.81□□□□□ -0.04
CLK3-218ENST00000566926 DRC1Q96MC2 740 aa14.81□□□□□ -0.04
CLK3-218ENST00000566926 TIGD1Q96MW7 591 aa14.81□□□□□ -0.04
CLK3-218ENST00000566926 TRIM6Q9C030 488 aaPredicted RBP14.81□□□□□ -0.04
CLK3-218ENST00000566926 NUP62CLQ9H1M0 184 aa14.81□□□□□ -0.04
CLK3-218ENST00000566926 C17orf75Q9HAS0 396 aa14.81□□□□□ -0.04
CLK3-218ENST00000566926 TYW1Q9NV66 732 aaKnown RBP14.81□□□□□ -0.04
CLK3-218ENST00000566926 KCND2Q9NZV8 630 aa14.81□□□□□ -0.04
CLK3-218ENST00000566926 THEGQ9P2T0 379 aa14.81□□□□□ -0.04
CLK3-218ENST00000566926 USP25Q9UHP3 1055 aa14.81□□□□□ -0.04
CLK3-218ENST00000566926 HOOK1Q9UJC3 728 aaKnown RBP14.81□□□□□ -0.04
CLK3-218ENST00000566926 COG5Q9UP83 839 aa14.81□□□□□ -0.04
CLK3-218ENST00000566926 PLAGL2Q9UPG8 496 aa14.81□□□□□ -0.04
CLK3-218ENST00000566926 PCDHB2Q9Y5E7 798 aa14.81□□□□□ -0.04
CLK3-218ENST00000566926 PHLPP2Q6ZVD8 1323 aa14.81□□□□□ -0.04
CLK3-218ENST00000566926 CNTNAP2Q9UHC6 1331 aa14.81□□□□□ -0.04
CLK3-218ENST00000566926 TSPAN1O60635 241 aa14.8□□□□□ -0.04
CLK3-218ENST00000566926 ATF7P17544 494 aaPredicted RBP14.8□□□□□ -0.04
CLK3-218ENST00000566926 PPM1AP35813 382 aa14.8□□□□□ -0.04
CLK3-218ENST00000566926 SYKP43405 635 aa14.8□□□□□ -0.04
CLK3-218ENST00000566926 MAPK6Q16659 721 aa14.8□□□□□ -0.04
CLK3-218ENST00000566926 FAM187BQ17R55 369 aa14.8□□□□□ -0.04
CLK3-218ENST00000566926 AAK1Q2M2I8 961 aa14.8□□□□□ -0.04
CLK3-218ENST00000566926 CLLU1OSQ5K130 101 aa14.8□□□□□ -0.04
CLK3-218ENST00000566926 RINT1Q6NUQ1 792 aa14.8□□□□□ -0.04
CLK3-218ENST00000566926 SHC4Q6S5L8 630 aa14.8□□□□□ -0.04
CLK3-218ENST00000566926 PPP4R3CPQ6ZMV5 832 aa14.8□□□□□ -0.04
CLK3-218ENST00000566926 ELOA2Q8IYF1 753 aaPredicted RBP14.8□□□□□ -0.04
CLK3-218ENST00000566926 SYT2Q8N9I0 419 aaPredicted RBP14.8□□□□□ -0.04
CLK3-218ENST00000566926 KLHL23Q8NBE8 558 aa14.8□□□□□ -0.04
CLK3-218ENST00000566926 COLGALT1Q8NBJ5 622 aa14.8□□□□□ -0.04
CLK3-218ENST00000566926 RASSF8Q8NHQ8 419 aa14.8□□□□□ -0.04
CLK3-218ENST00000566926 URGCPQ8TCY9 931 aa14.8□□□□□ -0.04
CLK3-218ENST00000566926 ATXN2LQ8WWM7 1075 aaKnown RBP14.8□□□□□ -0.04
CLK3-218ENST00000566926 PPP2R3CQ969Q6 453 aa14.8□□□□□ -0.04
CLK3-218ENST00000566926 PNMA5Q96PV4 448 aa14.8□□□□□ -0.04
CLK3-218ENST00000566926 CSRNP2Q9H175 543 aa14.8□□□□□ -0.04
CLK3-218ENST00000566926 CWH43Q9H720 699 aa14.8□□□□□ -0.04
CLK3-218ENST00000566926 RNF19AQ9NV58 838 aa14.8□□□□□ -0.04
CLK3-218ENST00000566926 KANSL3Q9P2N6 904 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms