RNA–Protein interactions for RNA: ENST00000565605.5

CNOT1-207, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-207ENST00000565605 USP34Q70CQ2 3546 aa10.68□□□□□ -0.7
CNOT1-207ENST00000565605 MGEA5O60502 916 aa10.68□□□□□ -0.7
CNOT1-207ENST00000565605 LINC00271P0C7V0 271 aa10.68□□□□□ -0.7
CNOT1-207ENST00000565605 FGFR4P22455 802 aa10.68□□□□□ -0.7
CNOT1-207ENST00000565605 IRS1P35568 1242 aa10.68□□□□□ -0.7
CNOT1-207ENST00000565605 PHKA2P46019 1235 aa10.68□□□□□ -0.7
CNOT1-207ENST00000565605 SARSP49591 514 aaKnown RBP10.68□□□□□ -0.7
CNOT1-207ENST00000565605 BECN1Q14457 450 aa10.68□□□□□ -0.7
CNOT1-207ENST00000565605 ECM1Q16610 540 aa10.68□□□□□ -0.7
CNOT1-207ENST00000565605 TIGD5Q53EQ6 642 aa10.68□□□□□ -0.7
CNOT1-207ENST00000565605 FAM173BQ6P4H8 233 aa10.68□□□□□ -0.7
CNOT1-207ENST00000565605 SLC24A5Q71RS6 500 aa10.68□□□□□ -0.7
CNOT1-207ENST00000565605 MAEAQ7L5Y9 396 aa10.68□□□□□ -0.7
CNOT1-207ENST00000565605 CATSPER4Q7RTX7 472 aa10.68□□□□□ -0.7
CNOT1-207ENST00000565605 SRGAP1Q7Z6B7 1085 aa10.68□□□□□ -0.7
CNOT1-207ENST00000565605 KCTD17Q8N5Z5 321 aa10.68□□□□□ -0.7
CNOT1-207ENST00000565605 RNF149Q8NC42 400 aa10.68□□□□□ -0.7
CNOT1-207ENST00000565605 AK8Q96MA6 479 aa10.68□□□□□ -0.7
CNOT1-207ENST00000565605 ZNF396Q96N95 335 aaPredicted RBP10.68□□□□□ -0.7
CNOT1-207ENST00000565605 SAMD11Q96NU1 681 aa10.68□□□□□ -0.7
CNOT1-207ENST00000565605 NT5C3AQ9H0P0 336 aa10.68□□□□□ -0.7
CNOT1-207ENST00000565605 BHMT2Q9H2M3 363 aa10.68□□□□□ -0.7
CNOT1-207ENST00000565605 NSUN3Q9H649 340 aaKnown RBP10.68□□□□□ -0.7
CNOT1-207ENST00000565605 CHST12Q9NRB3 414 aa10.68□□□□□ -0.7
CNOT1-207ENST00000565605 CLDND1Q9NY35 253 aa10.68□□□□□ -0.7
CNOT1-207ENST00000565605 DNM3Q9UQ16 869 aa10.68□□□□□ -0.7
CNOT1-207ENST00000565605 PCDHB7Q9Y5E2 793 aa10.68□□□□□ -0.7
CNOT1-207ENST00000565605 CLIC4Q9Y696 253 aa10.68□□□□□ -0.7
CNOT1-207ENST00000565605 C9IYK1 514 aa10.67□□□□□ -0.7
CNOT1-207ENST00000565605 E9PMD0 336 aa10.67□□□□□ -0.7
CNOT1-207ENST00000565605 SLC26A4O43511 780 aa10.67□□□□□ -0.7
CNOT1-207ENST00000565605 CSDE1O75534 798 aaKnown RBP10.67□□□□□ -0.7
CNOT1-207ENST00000565605 DGKIO75912 1065 aa10.67□□□□□ -0.7
CNOT1-207ENST00000565605 ERLIN2O94905 339 aa10.67□□□□□ -0.7
CNOT1-207ENST00000565605 EYA4O95677 639 aa10.67□□□□□ -0.7
CNOT1-207ENST00000565605 CYP11B2P19099 503 aa10.67□□□□□ -0.7
CNOT1-207ENST00000565605 ARL2P36404 184 aa10.67□□□□□ -0.7
CNOT1-207ENST00000565605 LONP1P36776 959 aaKnown RBP10.67□□□□□ -0.7
CNOT1-207ENST00000565605 UBA7P41226 1012 aa10.67□□□□□ -0.7
CNOT1-207ENST00000565605 CEBPZQ03701 1054 aaKnown RBP10.67□□□□□ -0.7
CNOT1-207ENST00000565605 DSC3Q14574 896 aa10.67□□□□□ -0.7
CNOT1-207ENST00000565605 CLUL1Q15846 466 aa10.67□□□□□ -0.7
CNOT1-207ENST00000565605 CTC1Q2NKJ3 1217 aa10.67□□□□□ -0.7
CNOT1-207ENST00000565605 FAM102BQ5T8I3 360 aa10.67□□□□□ -0.7
CNOT1-207ENST00000565605 FOXD4L5Q5VV16 416 aaPredicted RBP10.67□□□□□ -0.7
CNOT1-207ENST00000565605 CABP7Q86V35 215 aa10.67□□□□□ -0.7
CNOT1-207ENST00000565605 ADHFE1Q8IWW8 467 aa10.67□□□□□ -0.7
CNOT1-207ENST00000565605 RASSF8Q8NHQ8 419 aa10.67□□□□□ -0.7
CNOT1-207ENST00000565605 ASAP3Q8TDY4 903 aa10.67□□□□□ -0.7
CNOT1-207ENST00000565605 FOXD4L4Q8WXT5 416 aaPredicted RBP10.67□□□□□ -0.7
CNOT1-207ENST00000565605 CALML4Q96GE6 196 aa10.67□□□□□ -0.7
CNOT1-207ENST00000565605 USP28Q96RU2 1077 aa10.67□□□□□ -0.7
CNOT1-207ENST00000565605 PHOX2BQ99453 314 aa10.67□□□□□ -0.7
CNOT1-207ENST00000565605 MMTAG2Q9BU76 263 aaKnown RBP10.67□□□□□ -0.7
CNOT1-207ENST00000565605 IFT122Q9HBG6 1241 aa10.67□□□□□ -0.7
CNOT1-207ENST00000565605 GPRC5CQ9NQ84 441 aa10.67□□□□□ -0.7
CNOT1-207ENST00000565605 DACT1Q9NYF0 836 aa10.67□□□□□ -0.7
CNOT1-207ENST00000565605 PRKAG3Q9UGI9 489 aa10.67□□□□□ -0.7
CNOT1-207ENST00000565605 PIN4Q9Y237 131 aaKnown RBP10.67□□□□□ -0.7
CNOT1-207ENST00000565605 LRRIQ4A6NIV6 560 aa10.66□□□□□ -0.7
CNOT1-207ENST00000565605 GOLGA8CPA6NN73 597 aa10.66□□□□□ -0.7
CNOT1-207ENST00000565605 INO80B-WBP1J3KQ70 363 aa10.66□□□□□ -0.7
CNOT1-207ENST00000565605 GRM6O15303 877 aa10.66□□□□□ -0.7
CNOT1-207ENST00000565605 F13A1P00488 732 aa10.66□□□□□ -0.7
CNOT1-207ENST00000565605 ZSCAN22P10073 491 aaPredicted RBP10.66□□□□□ -0.7
CNOT1-207ENST00000565605 GLRA2P23416 452 aa10.66□□□□□ -0.7
CNOT1-207ENST00000565605 MARCKSP29966 332 aaPredicted RBP10.66□□□□□ -0.7
CNOT1-207ENST00000565605 GTF2F1P35269 517 aaKnown RBP eCLIP10.66□□□□□ -0.76e-8■■■■□ 19.3
CNOT1-207ENST00000565605 PTENP60484 403 aa10.66□□□□□ -0.7
CNOT1-207ENST00000565605 POU5F1BQ06416 359 aa10.66□□□□□ -0.7
CNOT1-207ENST00000565605 NCBP1Q09161 790 aaKnown RBP10.66□□□□□ -0.7
CNOT1-207ENST00000565605 HYAL1Q12794 435 aa10.66□□□□□ -0.7
CNOT1-207ENST00000565605 CAPSQ13938 189 aa10.66□□□□□ -0.7
CNOT1-207ENST00000565605 BTG3Q14201 252 aaPredicted RBP10.66□□□□□ -0.7
CNOT1-207ENST00000565605 PTPAQ15257 358 aa10.66□□□□□ -0.7
CNOT1-207ENST00000565605 PCBP1Q15365 356 aaKnown RBP eCLIP10.66□□□□□ -0.7
CNOT1-207ENST00000565605 HYIQ5T013 277 aa10.66□□□□□ -0.7
CNOT1-207ENST00000565605 TWF2Q6IBS0 349 aaKnown RBP10.66□□□□□ -0.7
CNOT1-207ENST00000565605 CMTR2Q8IYT2 770 aaKnown RBP10.66□□□□□ -0.7
CNOT1-207ENST00000565605 FIBCD1Q8N539 461 aa10.66□□□□□ -0.7
CNOT1-207ENST00000565605 PNMA5Q96PV4 448 aa10.66□□□□□ -0.7
CNOT1-207ENST00000565605 PLIN2Q99541 437 aa10.66□□□□□ -0.7
CNOT1-207ENST00000565605 ELAC1Q9H777 363 aaKnown RBP10.66□□□□□ -0.7
CNOT1-207ENST00000565605 TMEM161AQ9NX61 479 aa10.66□□□□□ -0.7
CNOT1-207ENST00000565605 MUTYHQ9UIF7 546 aa10.66□□□□□ -0.7
CNOT1-207ENST00000565605 MICAL3Q7RTP6 2002 aa10.66□□□□□ -0.7
CNOT1-207ENST00000565605 WDR81Q562E7 1941 aa10.66□□□□□ -0.7
CNOT1-207ENST00000565605 COL4A6Q14031 1691 aa10.66□□□□□ -0.7
CNOT1-207ENST00000565605 LINC01565O15544 149 aa10.65□□□□□ -0.7
CNOT1-207ENST00000565605 HOXA2O43364 376 aa10.65□□□□□ -0.7
CNOT1-207ENST00000565605 SSBP05455 408 aaKnown RBP eCLIP10.65□□□□□ -0.7
CNOT1-207ENST00000565605 SKIP12755 728 aa10.65□□□□□ -0.7
CNOT1-207ENST00000565605 TXLNAP40222 546 aa10.65□□□□□ -0.7
CNOT1-207ENST00000565605 NAMPTP43490 491 aa10.65□□□□□ -0.7
CNOT1-207ENST00000565605 GRIN1Q05586 938 aa10.65□□□□□ -0.7
CNOT1-207ENST00000565605 SLC39A14Q15043 492 aa10.65□□□□□ -0.7
CNOT1-207ENST00000565605 PPP2R5AQ15172 486 aa10.65□□□□□ -0.7
CNOT1-207ENST00000565605 STK38Q15208 465 aa10.65□□□□□ -0.7
CNOT1-207ENST00000565605 SMAD2Q15796 467 aaKnown RBP10.65□□□□□ -0.7
CNOT1-207ENST00000565605 KCNK18Q7Z418 384 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms