RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 PAHP00439 452 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 SLC4A1P02730 911 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 A1BGP04217 495 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 TPM1P09493 284 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 FGRP09769 529 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 UQCRFS1P1P0C7P4 283 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 PNMA6AP0CW24 399 aaPredicted RBP5.64□□□□□ -1.51
CAPN3-214ENST00000565274 SLC5A1P13866 664 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 IL2RBP14784 551 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 EPHA1P21709 976 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 FGFR2P21802 821 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 EIF4BP23588 611 aaKnown RBP5.64□□□□□ -1.51
CAPN3-214ENST00000565274 SERPINB3P29508 390 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 MAP2K2P36507 400 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 EPHB1P54762 984 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 HDAC4P56524 1084 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 ANTXR2P58335 489 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 TPM4P67936 248 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 KIF23Q02241 960 aaPredicted RBP5.64□□□□□ -1.51
CAPN3-214ENST00000565274 APBA1Q02410 837 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 CYP4A11Q02928 519 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 ITIH3Q06033 890 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 ADCY1Q08828 1119 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 ZBTB17Q13105 803 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 MOGSQ13724 837 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 NCAPHQ15003 741 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 SMUG1Q53HV7 270 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 BOLA3Q53S33 107 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 RILPL1Q5EBL4 403 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 FKBP15Q5T1M5 1219 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 E4F1Q66K89 784 aaPredicted RBP5.64□□□□□ -1.51
CAPN3-214ENST00000565274 MZT2BQ6NZ67 158 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 INTS5Q6P9B9 1019 aaKnown RBP5.64□□□□□ -1.51
CAPN3-214ENST00000565274 LEKR1Q6ZMV7 388 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 C1orf122Q6ZSJ8 110 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 MAATS1Q7Z4T9 603 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 TXLNBQ8N3L3 684 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 FSIP1Q8NA03 581 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 ATP11CQ8NB49 1132 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 SHKBP1Q8TBC3 707 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 SPATA18Q8TC71 538 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 EPS8L3Q8TE67 593 aaKnown RBP5.64□□□□□ -1.51
CAPN3-214ENST00000565274 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.64□□□□□ -1.51
CAPN3-214ENST00000565274 DDX11Q96FC9 970 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 FAM46AQ96IP4 442 aaKnown RBP5.64□□□□□ -1.51
CAPN3-214ENST00000565274 MYRFLQ96LU7 910 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 ALG1Q9BT22 464 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 UBXN6Q9BZV1 441 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 DISC1Q9NRI5 854 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 KRT82Q9NSB4 513 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.64□□□□□ -1.51
CAPN3-214ENST00000565274 STIM2Q9P246 746 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 DNAI1Q9UI46 699 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 PCDHGC5Q9Y5F6 944 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 SNCAIPQ9Y6H5 919 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 RTL9Q8NET4 1388 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 TCRBV5S4A2TA0A5A2 114 aa5.63□□□□□ -1.51
CAPN3-214ENST00000565274 PRR19A6NJB7 356 aa5.63□□□□□ -1.51
CAPN3-214ENST00000565274 WDR64B1ANS9 1081 aa5.63□□□□□ -1.51
CAPN3-214ENST00000565274 SH2B2O14492 632 aaPredicted RBP5.63□□□□□ -1.51
CAPN3-214ENST00000565274 ZNF213O14771 459 aa5.63□□□□□ -1.51
CAPN3-214ENST00000565274 DTNBO60941 627 aa5.63□□□□□ -1.51
CAPN3-214ENST00000565274 ADAM11O75078 769 aa5.63□□□□□ -1.51
CAPN3-214ENST00000565274 TBCAO75347 108 aaKnown RBP5.63□□□□□ -1.51
CAPN3-214ENST00000565274 ZNF254O75437 659 aa5.63□□□□□ -1.51
CAPN3-214ENST00000565274 ERLIN1O75477 346 aa5.63□□□□□ -1.51
CAPN3-214ENST00000565274 TADA3O75528 432 aa5.63□□□□□ -1.51
CAPN3-214ENST00000565274 STARD3NLO95772 234 aa5.63□□□□□ -1.51
CAPN3-214ENST00000565274 AGR2O95994 175 aa5.63□□□□□ -1.51
CAPN3-214ENST00000565274 WNT11O96014 354 aa5.63□□□□□ -1.51
CAPN3-214ENST00000565274 CYP17A1P05093 508 aa5.63□□□□□ -1.51
CAPN3-214ENST00000565274 SLC3A2P08195 630 aaKnown RBP5.63□□□□□ -1.51
CAPN3-214ENST00000565274 MTHFD1P11586 935 aaKnown RBP5.63□□□□□ -1.51
CAPN3-214ENST00000565274 BMP3P12645 472 aa5.63□□□□□ -1.51
CAPN3-214ENST00000565274 PTPRAP18433 802 aa5.63□□□□□ -1.51
CAPN3-214ENST00000565274 TRIM21P19474 475 aaKnown RBP5.63□□□□□ -1.51
CAPN3-214ENST00000565274 SPINK2P20155 84 aa5.63□□□□□ -1.51
CAPN3-214ENST00000565274 SFPQP23246 707 aaKnown RBP eCLIP5.63□□□□□ -1.51
CAPN3-214ENST00000565274 GRK2P25098 689 aa5.63□□□□□ -1.51
CAPN3-214ENST00000565274 S100A5P33763 92 aa5.63□□□□□ -1.51
CAPN3-214ENST00000565274 HSPA1LP34931 641 aa5.63□□□□□ -1.51
CAPN3-214ENST00000565274 USP8P40818 1118 aa5.63□□□□□ -1.51
CAPN3-214ENST00000565274 CD86P42081 329 aa5.63□□□□□ -1.51
CAPN3-214ENST00000565274 ZAP70P43403 619 aa5.63□□□□□ -1.51
CAPN3-214ENST00000565274 ME1P48163 572 aa5.63□□□□□ -1.51
CAPN3-214ENST00000565274 RXRGP48443 463 aa5.63□□□□□ -1.51
CAPN3-214ENST00000565274 POLD2P49005 469 aa5.63□□□□□ -1.51
CAPN3-214ENST00000565274 PPM1FP49593 454 aaPredicted RBP5.63□□□□□ -1.51
CAPN3-214ENST00000565274 NT5C2P49902 561 aa5.63□□□□□ -1.51
CAPN3-214ENST00000565274 ST13P50502 369 aaKnown RBP5.63□□□□□ -1.51
CAPN3-214ENST00000565274 POLR2FP61218 127 aaKnown RBP5.63□□□□□ -1.51
CAPN3-214ENST00000565274 AP2B1P63010 937 aa5.63□□□□□ -1.51
CAPN3-214ENST00000565274 MCL1Q07820 350 aa5.63□□□□□ -1.51
CAPN3-214ENST00000565274 IFIT5Q13325 482 aaKnown RBP5.63□□□□□ -1.51
CAPN3-214ENST00000565274 COG2Q14746 738 aa5.63□□□□□ -1.51
CAPN3-214ENST00000565274 PTPAQ15257 358 aa5.63□□□□□ -1.51
CAPN3-214ENST00000565274 RBBP5Q15291 538 aaKnown RBP5.63□□□□□ -1.51
CAPN3-214ENST00000565274 NTRK3Q16288 839 aa5.63□□□□□ -1.51
CAPN3-214ENST00000565274 TTC39AQ5SRH9 613 aa5.63□□□□□ -1.51
CAPN3-214ENST00000565274 TEX35Q5T0J7 233 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms