RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 HOXA2O43364 376 aa17.6■□□□□ 0.41
RAB40C-208ENST00000564703 TRAK2O60296 914 aa17.6■□□□□ 0.41
RAB40C-208ENST00000564703 TSPAN1O60635 241 aa17.6■□□□□ 0.41
RAB40C-208ENST00000564703 SCP2P22307 547 aa17.6■□□□□ 0.41
RAB40C-208ENST00000564703 ABCD1P33897 745 aa17.6■□□□□ 0.41
RAB40C-208ENST00000564703 PBX2P40425 430 aa17.6■□□□□ 0.41
RAB40C-208ENST00000564703 E2F4Q16254 413 aa17.6■□□□□ 0.41
RAB40C-208ENST00000564703 FAM187BQ17R55 369 aa17.6■□□□□ 0.41
RAB40C-208ENST00000564703 GPR153Q6NV75 609 aa17.6■□□□□ 0.41
RAB40C-208ENST00000564703 PPP4R3CPQ6ZMV5 832 aa17.6■□□□□ 0.41
RAB40C-208ENST00000564703 APBB1IPQ7Z5R6 666 aaPredicted RBP17.6■□□□□ 0.41
RAB40C-208ENST00000564703 ECHDC2Q86YB7 292 aa17.6■□□□□ 0.41
RAB40C-208ENST00000564703 FAM178BQ8IXR5 827 aa17.6■□□□□ 0.41
RAB40C-208ENST00000564703 CCDC65Q8IXS2 484 aa17.6■□□□□ 0.41
RAB40C-208ENST00000564703 ABI1Q8IZP0 508 aa17.6■□□□□ 0.41
RAB40C-208ENST00000564703 FSIP1Q8NA03 581 aa17.6■□□□□ 0.41
RAB40C-208ENST00000564703 CNNM3Q8NE01 707 aa17.6■□□□□ 0.41
RAB40C-208ENST00000564703 STAMQ92783 540 aa17.6■□□□□ 0.41
RAB40C-208ENST00000564703 PGBD4Q96DM1 585 aa17.6■□□□□ 0.41
RAB40C-208ENST00000564703 CCDC51Q96ER9 411 aa17.6■□□□□ 0.41
RAB40C-208ENST00000564703 KIFC3Q9BVG8 833 aa17.6■□□□□ 0.41
RAB40C-208ENST00000564703 TRAIPQ9BWF2 469 aa17.6■□□□□ 0.41
RAB40C-208ENST00000564703 TRIM6Q9C030 488 aaPredicted RBP17.6■□□□□ 0.41
RAB40C-208ENST00000564703 KBTBD4Q9NVX7 518 aa17.6■□□□□ 0.41
RAB40C-208ENST00000564703 TTC3P53804 2025 aa17.6■□□□□ 0.41
RAB40C-208ENST00000564703 SLFN14P0C7P3 912 aa17.59■□□□□ 0.41
RAB40C-208ENST00000564703 MYOGP15173 224 aa17.59■□□□□ 0.41
RAB40C-208ENST00000564703 GAP43P17677 238 aa17.59■□□□□ 0.41
RAB40C-208ENST00000564703 ARF4P18085 180 aaPredicted RBP17.59■□□□□ 0.41
RAB40C-208ENST00000564703 HOXA11P31270 313 aaPredicted RBP17.59■□□□□ 0.41
RAB40C-208ENST00000564703 FXR1P51114 621 aaKnown RBP eCLIP17.59■□□□□ 0.41
RAB40C-208ENST00000564703 HERC4Q5GLZ8 1057 aaPredicted RBP17.59■□□□□ 0.41
RAB40C-208ENST00000564703 ZNF697Q5TEC3 545 aa17.59■□□□□ 0.41
RAB40C-208ENST00000564703 HAUS6Q7Z4H7 955 aa17.59■□□□□ 0.41
RAB40C-208ENST00000564703 HACE1Q8IYU2 909 aa17.59■□□□□ 0.41
RAB40C-208ENST00000564703 CPB2Q96IY4 423 aa17.59■□□□□ 0.41
RAB40C-208ENST00000564703 ADPGKQ9BRR6 497 aa17.59■□□□□ 0.41
RAB40C-208ENST00000564703 NKX2-4Q9H2Z4 354 aa17.59■□□□□ 0.41
RAB40C-208ENST00000564703 FAM105AQ9NUU6 356 aa17.59■□□□□ 0.41
RAB40C-208ENST00000564703 PANK4Q9NVE7 773 aa17.59■□□□□ 0.41
RAB40C-208ENST00000564703 SEL1LQ9UBV2 794 aa17.59■□□□□ 0.41
RAB40C-208ENST00000564703 SERTAD1Q9UHV2 236 aa17.59■□□□□ 0.41
RAB40C-208ENST00000564703 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.58■□□□□ 0.4
RAB40C-208ENST00000564703 A0A1B0GUA9 196 aa17.58■□□□□ 0.4
RAB40C-208ENST00000564703 N4BP3O15049 544 aa17.58■□□□□ 0.4
RAB40C-208ENST00000564703 ZNF623O75123 536 aa17.58■□□□□ 0.4
RAB40C-208ENST00000564703 DGKIO75912 1065 aa17.58■□□□□ 0.4
RAB40C-208ENST00000564703 AFMP43652 599 aa17.58■□□□□ 0.4
RAB40C-208ENST00000564703 NDUFA8P51970 172 aa17.58■□□□□ 0.4
RAB40C-208ENST00000564703 ZNF131P52739 623 aa17.58■□□□□ 0.4
RAB40C-208ENST00000564703 HTRA4P83105 476 aaPredicted RBP17.58■□□□□ 0.4
RAB40C-208ENST00000564703 BTG3Q14201 252 aaPredicted RBP17.58■□□□□ 0.4
RAB40C-208ENST00000564703 PPP2R2DQ66LE6 453 aa17.58■□□□□ 0.4
RAB40C-208ENST00000564703 SLC27A1Q6PCB7 646 aa17.58■□□□□ 0.4
RAB40C-208ENST00000564703 TCHPQ9BT92 498 aa17.58■□□□□ 0.4
RAB40C-208ENST00000564703 MRPL4Q9BYD3 311 aaKnown RBP17.58■□□□□ 0.4
RAB40C-208ENST00000564703 ARHGAP28Q9P2N2 729 aa17.58■□□□□ 0.4
RAB40C-208ENST00000564703 HPSEQ9Y251 543 aa17.58■□□□□ 0.4
RAB40C-208ENST00000564703 PCDHB2Q9Y5E7 798 aa17.58■□□□□ 0.4
RAB40C-208ENST00000564703 TMEM265A0A087WTH1 108 aa17.57■□□□□ 0.4
RAB40C-208ENST00000564703 K7ENM7 598 aa17.57■□□□□ 0.4
RAB40C-208ENST00000564703 B4GALT5O43286 388 aa17.57■□□□□ 0.4
RAB40C-208ENST00000564703 CA3P07451 260 aa17.57■□□□□ 0.4
RAB40C-208ENST00000564703 ASIC1P78348 528 aa17.57■□□□□ 0.4
RAB40C-208ENST00000564703 AMHR2Q16671 573 aa17.57■□□□□ 0.4
RAB40C-208ENST00000564703 LONRF3Q496Y0 759 aa17.57■□□□□ 0.4
RAB40C-208ENST00000564703 FIBCD1Q8N539 461 aa17.57■□□□□ 0.4
RAB40C-208ENST00000564703 TMEM161BQ8NDZ6 487 aa17.57■□□□□ 0.4
RAB40C-208ENST00000564703 DNAJC19Q96DA6 116 aa17.57■□□□□ 0.4
RAB40C-208ENST00000564703 C7orf25Q9BPX7 421 aa17.57■□□□□ 0.4
RAB40C-208ENST00000564703 CCDC113Q9H0I3 377 aa17.57■□□□□ 0.4
RAB40C-208ENST00000564703 ZNF576Q9H609 170 aa17.57■□□□□ 0.4
RAB40C-208ENST00000564703 MRPL44Q9H9J2 332 aaKnown RBP17.57■□□□□ 0.4
RAB40C-208ENST00000564703 YBX2Q9Y2T7 364 aaKnown RBP17.57■□□□□ 0.4
RAB40C-208ENST00000564703 ADGRA3Q8IWK6 1321 aa17.56■□□□□ 0.4
RAB40C-208ENST00000564703 CNTNAP2Q9UHC6 1331 aa17.56■□□□□ 0.4
RAB40C-208ENST00000564703 FAM237AA0A1B0GTK4 181 aa17.56■□□□□ 0.4
RAB40C-208ENST00000564703 TBKBP1A7MCY6 615 aa17.56■□□□□ 0.4
RAB40C-208ENST00000564703 ZNF202O95125 648 aa17.56■□□□□ 0.4
RAB40C-208ENST00000564703 MAPTP10636 758 aaKnown RBP17.56■□□□□ 0.4
RAB40C-208ENST00000564703 ITGA4P13612 1032 aa17.56■□□□□ 0.4
RAB40C-208ENST00000564703 NCKAP1LP55160 1127 aa17.56■□□□□ 0.4
RAB40C-208ENST00000564703 ATF7IP2Q5U623 682 aa17.56■□□□□ 0.4
RAB40C-208ENST00000564703 KANK3Q6NY19 840 aa17.56■□□□□ 0.4
RAB40C-208ENST00000564703 CRIPAKQ8N1N5 446 aa17.56■□□□□ 0.4
RAB40C-208ENST00000564703 BICD1Q96G01 975 aa17.56■□□□□ 0.4
RAB40C-208ENST00000564703 TRIM9Q9C026 710 aa17.56■□□□□ 0.4
RAB40C-208ENST00000564703 UBN1Q9NPG3 1134 aa17.56■□□□□ 0.4
RAB40C-208ENST00000564703 NPTXRO95502 500 aa17.55■□□□□ 0.4
RAB40C-208ENST00000564703 SPOUT1Q5T280 376 aaKnown RBP17.55■□□□□ 0.4
RAB40C-208ENST00000564703 STXBP4Q6ZWJ1 553 aa17.55■□□□□ 0.4
RAB40C-208ENST00000564703 MRPL10Q7Z7H8 261 aaKnown RBP17.55■□□□□ 0.4
RAB40C-208ENST00000564703 CDR2LQ86X02 465 aaPredicted RBP17.55■□□□□ 0.4
RAB40C-208ENST00000564703 SFR1Q86XK3 245 aa17.55■□□□□ 0.4
RAB40C-208ENST00000564703 CMTR2Q8IYT2 770 aaKnown RBP17.55■□□□□ 0.4
RAB40C-208ENST00000564703 RSPH1Q8WYR4 309 aa17.55■□□□□ 0.4
RAB40C-208ENST00000564703 CCDC47Q96A33 483 aaKnown RBP17.55■□□□□ 0.4
RAB40C-208ENST00000564703 ZNF689Q96CS4 500 aaPredicted RBP17.55■□□□□ 0.4
RAB40C-208ENST00000564703 PAGE5Q96GU1 130 aa17.55■□□□□ 0.4
RAB40C-208ENST00000564703 TMEM117Q9H0C3 514 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms