RNA–Protein interactions for RNA: ENST00000564634.5

CYLD-208, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 3

Gene CYLD, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-208ENST00000564634 CTTNQ14247 550 aaKnown RBP28.11■■■□□ 2.09
CYLD-208ENST00000564634 RILPL1Q5EBL4 403 aa28.11■■■□□ 2.09
CYLD-208ENST00000564634 ZNF710Q8N1W2 664 aa28.11■■■□□ 2.09
CYLD-208ENST00000564634 MRPL43Q8N983 215 aaKnown RBP28.11■■■□□ 2.09
CYLD-208ENST00000564634 HSD17B14Q9BPX1 270 aa28.11■■■□□ 2.09
CYLD-208ENST00000564634 ADAM7Q9H2U9 754 aa28.11■■■□□ 2.09
CYLD-208ENST00000564634 WRAP73Q9P2S5 460 aaPredicted RBP28.11■■■□□ 2.09
CYLD-208ENST00000564634 PPME1Q9Y570 386 aa28.11■■■□□ 2.09
CYLD-208ENST00000564634 ZFHX2Q9C0A1 2572 aaPredicted RBP28.1■■■□□ 2.09
CYLD-208ENST00000564634 PLXNA3P51805 1871 aa28.1■■■□□ 2.09
CYLD-208ENST00000564634 TMEM150BA6NC51 233 aa28.1■■■□□ 2.09
CYLD-208ENST00000564634 CLASP2O75122 1294 aaKnown RBP28.1■■■□□ 2.09
CYLD-208ENST00000564634 CSDE1O75534 798 aaKnown RBP28.1■■■□□ 2.09
CYLD-208ENST00000564634 PDCP20941 246 aa28.1■■■□□ 2.09
CYLD-208ENST00000564634 GPC3P51654 580 aa28.1■■■□□ 2.09
CYLD-208ENST00000564634 CYP4A11Q02928 519 aa28.1■■■□□ 2.09
CYLD-208ENST00000564634 NBR1Q14596 966 aa28.1■■■□□ 2.09
CYLD-208ENST00000564634 RARS2Q5T160 578 aaKnown RBP28.1■■■□□ 2.09
CYLD-208ENST00000564634 OTUD6AQ7L8S5 288 aa28.1■■■□□ 2.09
CYLD-208ENST00000564634 TPH2Q8IWU9 490 aa28.1■■■□□ 2.09
CYLD-208ENST00000564634 C4orf32Q8N8J7 132 aa28.1■■■□□ 2.09
CYLD-208ENST00000564634 CYP26B1Q9NR63 512 aa28.1■■■□□ 2.09
CYLD-208ENST00000564634 SORCS3Q9UPU3 1222 aa28.1■■■□□ 2.09
CYLD-208ENST00000564634 PCDHB6Q9Y5E3 794 aa28.1■■■□□ 2.09
CYLD-208ENST00000564634 ASGR2P07307 311 aa28.09■■■□□ 2.09
CYLD-208ENST00000564634 DARSP14868 501 aaKnown RBP28.09■■■□□ 2.09
CYLD-208ENST00000564634 BCAR1P56945 870 aa28.09■■■□□ 2.09
CYLD-208ENST00000564634 C12orf76Q8N812 135 aaPredicted RBP28.09■■■□□ 2.09
CYLD-208ENST00000564634 NLRP7Q8WX94 980 aa28.09■■■□□ 2.09
CYLD-208ENST00000564634 AUTS2Q8WXX7 1259 aa28.09■■■□□ 2.09
CYLD-208ENST00000564634 NECTIN4Q96NY8 510 aa28.09■■■□□ 2.09
CYLD-208ENST00000564634 JPH2Q9BR39 696 aaPredicted RBP28.09■■■□□ 2.09
CYLD-208ENST00000564634 SH2D3AQ9BRG2 576 aa28.09■■■□□ 2.09
CYLD-208ENST00000564634 IRF2BPLQ9H1B7 796 aa28.09■■■□□ 2.09
CYLD-208ENST00000564634 IGKV6-21A0A0C4DH24 114 aa28.08■■■□□ 2.09
CYLD-208ENST00000564634 POTEMA6NI47 508 aa28.08■■■□□ 2.09
CYLD-208ENST00000564634 MAFO75444 373 aaPredicted RBP28.08■■■□□ 2.09
CYLD-208ENST00000564634 LYPLA2O95372 231 aa28.08■■■□□ 2.09
CYLD-208ENST00000564634 YWHABP31946 246 aaKnown RBP28.08■■■□□ 2.09
CYLD-208ENST00000564634 ITIH3Q06033 890 aa28.08■■■□□ 2.09
CYLD-208ENST00000564634 PLA2G4FQ68DD2 849 aa28.08■■■□□ 2.09
CYLD-208ENST00000564634 KANK3Q6NY19 840 aa28.08■■■□□ 2.09
CYLD-208ENST00000564634 ZNF598Q86UK7 904 aaKnown RBP28.08■■■□□ 2.09
CYLD-208ENST00000564634 EXOC8Q8IYI6 725 aa28.08■■■□□ 2.09
CYLD-208ENST00000564634 UBALD2Q8IYN6 164 aa28.08■■■□□ 2.09
CYLD-208ENST00000564634 CEP170P1Q96L14 293 aa28.08■■■□□ 2.09
CYLD-208ENST00000564634 MYO15AQ9UKN7 3530 aa28.08■■■□□ 2.09
CYLD-208ENST00000564634 A0A0U1RQF3 1178 aa28.07■■■□□ 2.08
CYLD-208ENST00000564634 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP28.07■■■□□ 2.08
CYLD-208ENST00000564634 LAD1O00515 517 aa28.07■■■□□ 2.08
CYLD-208ENST00000564634 GALR2O43603 387 aaPredicted RBP28.07■■■□□ 2.08
CYLD-208ENST00000564634 ZC3H11AO75152 810 aaKnown RBP eCLIP28.07■■■□□ 2.08
CYLD-208ENST00000564634 DNM2P50570 870 aa28.07■■■□□ 2.08
CYLD-208ENST00000564634 PTGDRQ13258 359 aa28.07■■■□□ 2.08
CYLD-208ENST00000564634 TMEM173Q86WV6 379 aaPredicted RBP28.07■■■□□ 2.08
CYLD-208ENST00000564634 TMEM105Q8N8V8 129 aa28.07■■■□□ 2.08
CYLD-208ENST00000564634 TMEM169Q96HH4 297 aa28.07■■■□□ 2.08
CYLD-208ENST00000564634 MRPL9Q9BYD2 267 aaKnown RBP28.07■■■□□ 2.08
CYLD-208ENST00000564634 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.07■■■□□ 2.08
CYLD-208ENST00000564634 CXCL14O95715 111 aa28.06■■■□□ 2.08
CYLD-208ENST00000564634 MTHFRP42898 656 aa28.06■■■□□ 2.08
CYLD-208ENST00000564634 ALDH7A1P49419 539 aaKnown RBP28.06■■■□□ 2.08
CYLD-208ENST00000564634 NPEPPSP55786 919 aa28.06■■■□□ 2.08
CYLD-208ENST00000564634 CDC42EP1Q00587 391 aa28.06■■■□□ 2.08
CYLD-208ENST00000564634 DRP2Q13474 957 aa28.06■■■□□ 2.08
CYLD-208ENST00000564634 LONRF3Q496Y0 759 aa28.06■■■□□ 2.08
CYLD-208ENST00000564634 VPS52Q8N1B4 723 aa28.06■■■□□ 2.08
CYLD-208ENST00000564634 TDRD5Q8NAT2 981 aaKnown RBP28.06■■■□□ 2.08
CYLD-208ENST00000564634 EOMESO95936 686 aa28.05■■■□□ 2.08
CYLD-208ENST00000564634 FXR2P51116 673 aaKnown RBP eCLIP28.05■■■□□ 2.08
CYLD-208ENST00000564634 XKR9Q5GH70 373 aa28.05■■■□□ 2.08
CYLD-208ENST00000564634 HSCBQ8IWL3 235 aa28.05■■■□□ 2.08
CYLD-208ENST00000564634 TMEM87AQ8NBN3 555 aa28.05■■■□□ 2.08
CYLD-208ENST00000564634 ERMNQ8TAM6 284 aa28.05■■■□□ 2.08
CYLD-208ENST00000564634 LPPQ93052 612 aa28.05■■■□□ 2.08
CYLD-208ENST00000564634 ZBP1Q9H171 429 aa28.05■■■□□ 2.08
CYLD-208ENST00000564634 TUFT1Q9NNX1 390 aa28.05■■■□□ 2.08
CYLD-208ENST00000564634 DACT1Q9NYF0 836 aa28.05■■■□□ 2.08
CYLD-208ENST00000564634 VPS13AQ96RL7 3174 aa28.05■■■□□ 2.08
CYLD-208ENST00000564634 XRCC6P12956 609 aaKnown RBP eCLIP28.04■■■□□ 2.08
CYLD-208ENST00000564634 EPCAMP16422 314 aa28.04■■■□□ 2.08
CYLD-208ENST00000564634 RFC5P40937 340 aa28.04■■■□□ 2.08
CYLD-208ENST00000564634 PDIA5Q14554 519 aa28.04■■■□□ 2.08
CYLD-208ENST00000564634 BRAPQ7Z569 592 aa28.04■■■□□ 2.08
CYLD-208ENST00000564634 ZNF579Q8NAF0 562 aaKnown RBP28.04■■■□□ 2.08
CYLD-208ENST00000564634 FEZF2Q8TBJ5 459 aa28.04■■■□□ 2.08
CYLD-208ENST00000564634 SLC7A3Q8WY07 619 aa28.04■■■□□ 2.08
CYLD-208ENST00000564634 POLR3CQ9BUI4 534 aaPredicted RBP28.04■■■□□ 2.08
CYLD-208ENST00000564634 DHX33Q9H6R0 707 aaKnown RBP28.04■■■□□ 2.08
CYLD-208ENST00000564634 ANKEF1Q9NU02 776 aa28.04■■■□□ 2.08
CYLD-208ENST00000564634 DBR1Q9UK59 544 aaKnown RBP28.04■■■□□ 2.08
CYLD-208ENST00000564634 MYO10Q9HD67 2058 aa28.04■■■□□ 2.08
CYLD-208ENST00000564634 VPS37CA5D8V6 355 aaPredicted RBP28.03■■■□□ 2.08
CYLD-208ENST00000564634 ZBTB39O15060 712 aa28.03■■■□□ 2.08
CYLD-208ENST00000564634 SPATA31C1P0DKV0 1188 aa28.03■■■□□ 2.08
CYLD-208ENST00000564634 PRPHP41219 470 aa28.03■■■□□ 2.08
CYLD-208ENST00000564634 BMS1Q14692 1282 aaKnown RBP28.03■■■□□ 2.08
CYLD-208ENST00000564634 KIAA1841Q6NSI8 718 aa28.03■■■□□ 2.08
CYLD-208ENST00000564634 CATSPER3Q86XQ3 398 aa28.03■■■□□ 2.08
CYLD-208ENST00000564634 RAB34Q9BZG1 259 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms