RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 CDC42EP1Q00587 391 aa21.08■□□□□ 0.97
NME3-207ENST00000564628 CES5AQ6NT32 575 aa21.08■□□□□ 0.97
NME3-207ENST00000564628 IPO9Q96P70 1041 aaKnown RBP21.08■□□□□ 0.97
NME3-207ENST00000564628 APOL5Q9BWW9 433 aa21.08■□□□□ 0.97
NME3-207ENST00000564628 ZSWIM4Q9H7M6 989 aa21.08■□□□□ 0.97
NME3-207ENST00000564628 HCFC2Q9Y5Z7 792 aa21.08■□□□□ 0.97
NME3-207ENST00000564628 IGKV6-21A0A0C4DH24 114 aa21.07■□□□□ 0.96
NME3-207ENST00000564628 CARNS1A5YM72 827 aa21.07■□□□□ 0.96
NME3-207ENST00000564628 LAD1O00515 517 aa21.07■□□□□ 0.96
NME3-207ENST00000564628 ALDH7A1P49419 539 aaKnown RBP21.07■□□□□ 0.96
NME3-207ENST00000564628 FXR2P51116 673 aaKnown RBP eCLIP21.07■□□□□ 0.96
NME3-207ENST00000564628 CYP4A11Q02928 519 aa21.07■□□□□ 0.96
NME3-207ENST00000564628 TBC1D8BQ0IIM8 1120 aa21.07■□□□□ 0.96
NME3-207ENST00000564628 PTGDRQ13258 359 aa21.07■□□□□ 0.96
NME3-207ENST00000564628 BMS1Q14692 1282 aaKnown RBP21.07■□□□□ 0.96
NME3-207ENST00000564628 BRAPQ7Z569 592 aa21.07■□□□□ 0.96
NME3-207ENST00000564628 ZBTB33Q86T24 672 aa21.07■□□□□ 0.96
NME3-207ENST00000564628 UBALD2Q8IYN6 164 aa21.07■□□□□ 0.96
NME3-207ENST00000564628 RNF169Q8NCN4 708 aa21.07■□□□□ 0.96
NME3-207ENST00000564628 RIPOR3Q96MK2 946 aa21.07■□□□□ 0.96
NME3-207ENST00000564628 SCLT1Q96NL6 688 aa21.07■□□□□ 0.96
NME3-207ENST00000564628 TRAIPQ9BWF2 469 aa21.07■□□□□ 0.96
NME3-207ENST00000564628 CHST12Q9NRB3 414 aa21.07■□□□□ 0.96
NME3-207ENST00000564628 PPME1Q9Y570 386 aa21.07■□□□□ 0.96
NME3-207ENST00000564628 DDX11L8A8MPP1 907 aa21.06■□□□□ 0.96
NME3-207ENST00000564628 PRPHP41219 470 aa21.06■□□□□ 0.96
NME3-207ENST00000564628 CTTNQ14247 550 aaKnown RBP21.06■□□□□ 0.96
NME3-207ENST00000564628 MTERF2Q49AM1 385 aa21.06■□□□□ 0.96
NME3-207ENST00000564628 PLA2G4FQ68DD2 849 aa21.06■□□□□ 0.96
NME3-207ENST00000564628 HELQQ8TDG4 1101 aa21.06■□□□□ 0.96
NME3-207ENST00000564628 NLRP7Q8WX94 980 aa21.06■□□□□ 0.96
NME3-207ENST00000564628 CYP26B1Q9NR63 512 aa21.06■□□□□ 0.96
NME3-207ENST00000564628 SORCS3Q9UPU3 1222 aa21.06■□□□□ 0.96
NME3-207ENST00000564628 VPS37CA5D8V6 355 aaPredicted RBP21.05■□□□□ 0.96
NME3-207ENST00000564628 CLASP2O75122 1294 aaKnown RBP21.05■□□□□ 0.96
NME3-207ENST00000564628 MAFO75444 373 aaPredicted RBP21.05■□□□□ 0.96
NME3-207ENST00000564628 SPATA31C1P0DKV0 1188 aa21.05■□□□□ 0.96
NME3-207ENST00000564628 YWHABP31946 246 aaKnown RBP21.05■□□□□ 0.96
NME3-207ENST00000564628 BCAR1P56945 870 aa21.05■□□□□ 0.96
NME3-207ENST00000564628 ATP2C1P98194 919 aaPredicted RBP21.05■□□□□ 0.96
NME3-207ENST00000564628 MTMR3Q13615 1198 aa21.05■□□□□ 0.96
NME3-207ENST00000564628 KREMEN2Q8NCW0 462 aa21.05■□□□□ 0.96
NME3-207ENST00000564628 TMEM169Q96HH4 297 aa21.05■□□□□ 0.96
NME3-207ENST00000564628 ZNF668Q96K58 619 aaPredicted RBP21.05■□□□□ 0.96
NME3-207ENST00000564628 SH2D3AQ9BRG2 576 aa21.05■□□□□ 0.96
NME3-207ENST00000564628 GCOM2Q9BZD3 368 aaPredicted RBP21.05■□□□□ 0.96
NME3-207ENST00000564628 POMKQ9H5K3 350 aa21.05■□□□□ 0.96
NME3-207ENST00000564628 FOXD4L1Q9NU39 408 aa21.05■□□□□ 0.96
NME3-207ENST00000564628 SP100P23497 879 aaPredicted RBP21.04■□□□□ 0.96
NME3-207ENST00000564628 MTHFRP42898 656 aa21.04■□□□□ 0.96
NME3-207ENST00000564628 NPEPPSP55786 919 aa21.04■□□□□ 0.96
NME3-207ENST00000564628 RESTQ13127 1097 aa21.04■□□□□ 0.96
NME3-207ENST00000564628 GIT2Q14161 759 aa21.04■□□□□ 0.96
NME3-207ENST00000564628 TPH2Q8IWU9 490 aa21.04■□□□□ 0.96
NME3-207ENST00000564628 IGSF22Q8N9C0 903 aa21.04■□□□□ 0.96
NME3-207ENST00000564628 ZNF579Q8NAF0 562 aaKnown RBP21.04■□□□□ 0.96
NME3-207ENST00000564628 POLR3CQ9BUI4 534 aaPredicted RBP21.04■□□□□ 0.96
NME3-207ENST00000564628 TUFT1Q9NNX1 390 aa21.04■□□□□ 0.96
NME3-207ENST00000564628 DZANK1Q9NVP4 752 aa21.04■□□□□ 0.96
NME3-207ENST00000564628 MTMR6Q9Y217 621 aa21.04■□□□□ 0.96
NME3-207ENST00000564628 IRAK3Q9Y616 596 aa21.04■□□□□ 0.96
NME3-207ENST00000564628 USP34Q70CQ2 3546 aa21.04■□□□□ 0.96
NME3-207ENST00000564628 C2CD4DB7Z1M9 353 aa21.03■□□□□ 0.96
NME3-207ENST00000564628 CXCL14O95715 111 aa21.03■□□□□ 0.96
NME3-207ENST00000564628 SKIP12755 728 aa21.03■□□□□ 0.96
NME3-207ENST00000564628 FGFR4P22455 802 aa21.03■□□□□ 0.96
NME3-207ENST00000564628 POLGP54098 1239 aaPredicted RBP21.03■□□□□ 0.96
NME3-207ENST00000564628 PDIA5Q14554 519 aa21.03■□□□□ 0.96
NME3-207ENST00000564628 IL17AQ16552 155 aa21.03■□□□□ 0.96
NME3-207ENST00000564628 FERMT3Q86UX7 667 aa21.03■□□□□ 0.96
NME3-207ENST00000564628 DHX33Q9H6R0 707 aaKnown RBP21.03■□□□□ 0.96
NME3-207ENST00000564628 ANKEF1Q9NU02 776 aa21.03■□□□□ 0.96
NME3-207ENST00000564628 CDH22Q9UJ99 828 aa21.03■□□□□ 0.96
NME3-207ENST00000564628 CACNA1HO95180 2353 aa21.03■□□□□ 0.96
NME3-207ENST00000564628 ZBTB39O15060 712 aa21.02■□□□□ 0.96
NME3-207ENST00000564628 MED24O75448 989 aa21.02■□□□□ 0.96
NME3-207ENST00000564628 SFPQP23246 707 aaKnown RBP eCLIP21.02■□□□□ 0.96
NME3-207ENST00000564628 RPA1P27694 616 aa21.02■□□□□ 0.96
NME3-207ENST00000564628 PHKA2P46019 1235 aa21.02■□□□□ 0.96
NME3-207ENST00000564628 DNM2P50570 870 aa21.02■□□□□ 0.96
NME3-207ENST00000564628 DRP2Q13474 957 aa21.02■□□□□ 0.96
NME3-207ENST00000564628 OTUD6AQ7L8S5 288 aa21.02■□□□□ 0.96
NME3-207ENST00000564628 DDX53Q86TM3 631 aaKnown RBP21.02■□□□□ 0.96
NME3-207ENST00000564628 CATSPER3Q86XQ3 398 aa21.02■□□□□ 0.96
NME3-207ENST00000564628 VPS52Q8N1B4 723 aa21.02■□□□□ 0.96
NME3-207ENST00000564628 ATOH1Q92858 354 aaPredicted RBP21.02■□□□□ 0.96
NME3-207ENST00000564628 CEP170P1Q96L14 293 aa21.02■□□□□ 0.96
NME3-207ENST00000564628 JPH2Q9BR39 696 aaPredicted RBP21.02■□□□□ 0.96
NME3-207ENST00000564628 INO80BQ9C086 356 aaPredicted RBP21.02■□□□□ 0.96
NME3-207ENST00000564628 ZBP1Q9H171 429 aa21.02■□□□□ 0.96
NME3-207ENST00000564628 NT5C1B-RDH14C9J2C7 533 aa21.01■□□□□ 0.95
NME3-207ENST00000564628 STX6O43752 255 aa21.01■□□□□ 0.95
NME3-207ENST00000564628 GFRA3O60609 400 aa21.01■□□□□ 0.95
NME3-207ENST00000564628 CSDE1O75534 798 aaKnown RBP21.01■□□□□ 0.95
NME3-207ENST00000564628 BRD1O95696 1058 aa21.01■□□□□ 0.95
NME3-207ENST00000564628 PDGFBP01127 241 aaPredicted RBP21.01■□□□□ 0.95
NME3-207ENST00000564628 CTSAP10619 480 aa21.01■□□□□ 0.95
NME3-207ENST00000564628 XRCC6P12956 609 aaKnown RBP eCLIP21.01■□□□□ 0.956e-11■■■■□ 23.7
NME3-207ENST00000564628 MUTP22033 750 aa21.01■□□□□ 0.95
NME3-207ENST00000564628 RFC5P40937 340 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms