RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 ANKRD34BA5PLL1 514 aa5.46□□□□□ -1.54
CDR2-203ENST00000563573 NPHS1O60500 1241 aa5.46□□□□□ -1.54
CDR2-203ENST00000563573 APPP05067 770 aa5.46□□□□□ -1.54
CDR2-203ENST00000563573 ASGR2P07307 311 aa5.46□□□□□ -1.54
CDR2-203ENST00000563573 ATF2P15336 505 aa5.46□□□□□ -1.54
CDR2-203ENST00000563573 PDE6AP16499 860 aa5.46□□□□□ -1.54
CDR2-203ENST00000563573 ZKSCAN1P17029 563 aaPredicted RBP5.46□□□□□ -1.54
CDR2-203ENST00000563573 ANP32AP39687 249 aaKnown RBP5.46□□□□□ -1.54
CDR2-203ENST00000563573 IARSP41252 1262 aaKnown RBP5.46□□□□□ -1.54
CDR2-203ENST00000563573 GJA8P48165 433 aa5.46□□□□□ -1.54
CDR2-203ENST00000563573 MMP14P50281 582 aa5.46□□□□□ -1.54
CDR2-203ENST00000563573 ZNF143P52747 638 aaPredicted RBP5.46□□□□□ -1.54
CDR2-203ENST00000563573 TNIP1Q15025 636 aa5.46□□□□□ -1.54
CDR2-203ENST00000563573 PPP2R5EQ16537 467 aa5.46□□□□□ -1.54
CDR2-203ENST00000563573 MFSD14BQ5SR56 506 aa5.46□□□□□ -1.54
CDR2-203ENST00000563573 ZFYVE27Q5T4F4 411 aa5.46□□□□□ -1.54
CDR2-203ENST00000563573 STRIP1Q5VSL9 837 aa5.46□□□□□ -1.54
CDR2-203ENST00000563573 SAPCD2Q86UD0 394 aa5.46□□□□□ -1.54
CDR2-203ENST00000563573 NT5DC4Q86YG4 428 aa5.46□□□□□ -1.54
CDR2-203ENST00000563573 NIM1KQ8IY84 436 aa5.46□□□□□ -1.54
CDR2-203ENST00000563573 USP33Q8TEY7 942 aa5.46□□□□□ -1.54
CDR2-203ENST00000563573 NSUN4Q96CB9 384 aaKnown RBP5.46□□□□□ -1.54
CDR2-203ENST00000563573 SEC62Q99442 399 aaKnown RBP5.46□□□□□ -1.54
CDR2-203ENST00000563573 MRIQ9BWK5 157 aa5.46□□□□□ -1.54
CDR2-203ENST00000563573 NACAP1Q9BZK3 213 aa5.46□□□□□ -1.54
CDR2-203ENST00000563573 TAOK3Q9H2K8 898 aa5.46□□□□□ -1.54
CDR2-203ENST00000563573 ZNF277Q9NRM2 450 aaPredicted RBP5.46□□□□□ -1.54
CDR2-203ENST00000563573 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.46□□□□□ -1.54
CDR2-203ENST00000563573 HDAC9Q9UKV0 1011 aa5.46□□□□□ -1.54
CDR2-203ENST00000563573 CNOT11Q9UKZ1 510 aaKnown RBP5.46□□□□□ -1.54
CDR2-203ENST00000563573 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.46□□□□□ -1.54
CDR2-203ENST00000563573 DUOX1Q9NRD9 1551 aa5.46□□□□□ -1.54
CDR2-203ENST00000563573 CCDC171Q6TFL3 1326 aa5.46□□□□□ -1.54
CDR2-203ENST00000563573 MYO3BQ8WXR4 1341 aa5.46□□□□□ -1.54
CDR2-203ENST00000563573 DICER1Q9UPY3 1922 aaKnown RBP5.45□□□□□ -1.54
CDR2-203ENST00000563573 A0A0D9SFI3 127 aa5.45□□□□□ -1.54
CDR2-203ENST00000563573 TCRBV5S4A2TA0A5A2 114 aa5.45□□□□□ -1.54
CDR2-203ENST00000563573 STXBP3O00186 592 aa5.45□□□□□ -1.54
CDR2-203ENST00000563573 GPAA1O43292 621 aa5.45□□□□□ -1.54
CDR2-203ENST00000563573 HSPD1P10809 573 aaKnown RBP5.45□□□□□ -1.54
CDR2-203ENST00000563573 RBM5P52756 815 aaKnown RBP eCLIP5.45□□□□□ -1.54
CDR2-203ENST00000563573 ANAPC15P60006 121 aa5.45□□□□□ -1.54
CDR2-203ENST00000563573 HTRA3P83110 453 aa5.45□□□□□ -1.54
CDR2-203ENST00000563573 MECOMQ03112 1051 aa5.45□□□□□ -1.54
CDR2-203ENST00000563573 GPR162Q16538 588 aa5.45□□□□□ -1.54
CDR2-203ENST00000563573 DPY19L1Q2PZI1 675 aa5.45□□□□□ -1.54
CDR2-203ENST00000563573 LIPIQ6XZB0 460 aa5.45□□□□□ -1.54
CDR2-203ENST00000563573 PRRT2Q7Z6L0 340 aaPredicted RBP5.45□□□□□ -1.54
CDR2-203ENST00000563573 AMOTL1Q8IY63 956 aa5.45□□□□□ -1.54
CDR2-203ENST00000563573 SYT8Q8NBV8 401 aa5.45□□□□□ -1.54
CDR2-203ENST00000563573 MAP4K1Q92918 833 aa5.45□□□□□ -1.54
CDR2-203ENST00000563573 OSBP2Q969R2 916 aa5.45□□□□□ -1.54
CDR2-203ENST00000563573 FGD4Q96M96 766 aa5.45□□□□□ -1.54
CDR2-203ENST00000563573 APBA2Q99767 749 aa5.45□□□□□ -1.54
CDR2-203ENST00000563573 KRTAP9-3Q9BYQ3 159 aa5.45□□□□□ -1.54
CDR2-203ENST00000563573 CRNKL1Q9BZJ0 848 aaKnown RBP5.45□□□□□ -1.54
CDR2-203ENST00000563573 LSG1Q9H089 658 aaKnown RBP5.45□□□□□ -1.54
CDR2-203ENST00000563573 PUS7LQ9H0K6 701 aaKnown RBP5.45□□□□□ -1.54
CDR2-203ENST00000563573 USP40Q9NVE5 1235 aa5.45□□□□□ -1.54
CDR2-203ENST00000563573 PCDHB10Q9UN67 800 aa5.45□□□□□ -1.54
CDR2-203ENST00000563573 JAG2Q9Y219 1238 aa5.45□□□□□ -1.54
CDR2-203ENST00000563573 PSME4Q14997 1843 aa5.45□□□□□ -1.54
CDR2-203ENST00000563573 MAST2Q6P0Q8 1798 aa5.44□□□□□ -1.54
CDR2-203ENST00000563573 RPAP1Q9BWH6 1393 aaPredicted RBP5.44□□□□□ -1.54
CDR2-203ENST00000563573 M0R2C6 588 aa5.44□□□□□ -1.54
CDR2-203ENST00000563573 NOP56O00567 594 aaKnown RBP5.44□□□□□ -1.54
CDR2-203ENST00000563573 ZNF213O14771 459 aa5.44□□□□□ -1.54
CDR2-203ENST00000563573 RAD17O75943 681 aa5.44□□□□□ -1.54
CDR2-203ENST00000563573 SBF1O95248 1867 aa5.44□□□□□ -1.54
CDR2-203ENST00000563573 VIL1P09327 827 aaKnown RBP5.44□□□□□ -1.54
CDR2-203ENST00000563573 PSMA5P28066 241 aa5.44□□□□□ -1.54
CDR2-203ENST00000563573 PRDX5P30044 214 aa5.44□□□□□ -1.54
CDR2-203ENST00000563573 HSPA4P34932 840 aa5.44□□□□□ -1.54
CDR2-203ENST00000563573 PTH1RQ03431 593 aa5.44□□□□□ -1.54
CDR2-203ENST00000563573 BECN1Q14457 450 aa5.44□□□□□ -1.54
CDR2-203ENST00000563573 KRT32Q14532 448 aa5.44□□□□□ -1.54
CDR2-203ENST00000563573 NCAPHQ15003 741 aa5.44□□□□□ -1.54
CDR2-203ENST00000563573 NECTIN1Q15223 517 aa5.44□□□□□ -1.54
CDR2-203ENST00000563573 IMMTQ16891 758 aaKnown RBP5.44□□□□□ -1.54
CDR2-203ENST00000563573 SKOR2Q2VWA4 1001 aaPredicted RBP5.44□□□□□ -1.54
CDR2-203ENST00000563573 SPATS1Q496A3 300 aa5.44□□□□□ -1.54
CDR2-203ENST00000563573 VWA3BQ502W6 1294 aa5.44□□□□□ -1.54
CDR2-203ENST00000563573 HHIPL2Q6UWX4 724 aa5.44□□□□□ -1.54
CDR2-203ENST00000563573 CCDC129Q6ZRS4 1044 aa5.44□□□□□ -1.54
CDR2-203ENST00000563573 KLHL6Q8WZ60 621 aa5.44□□□□□ -1.54
CDR2-203ENST00000563573 TEKT1Q969V4 418 aa5.44□□□□□ -1.54
CDR2-203ENST00000563573 SHDQ96IW2 340 aa5.44□□□□□ -1.54
CDR2-203ENST00000563573 STRBPQ96SI9 672 aaKnown RBP5.44□□□□□ -1.54
CDR2-203ENST00000563573 MTA3Q9BTC8 594 aa5.44□□□□□ -1.54
CDR2-203ENST00000563573 MCMBPQ9BTE3 642 aa5.44□□□□□ -1.54
CDR2-203ENST00000563573 NAPBQ9H115 298 aa5.44□□□□□ -1.54
CDR2-203ENST00000563573 ATP8A2Q9NTI2 1148 aa5.44□□□□□ -1.54
CDR2-203ENST00000563573 AATFQ9NY61 560 aaKnown RBP eCLIP5.44□□□□□ -1.54
CDR2-203ENST00000563573 AKT3Q9Y243 479 aa5.44□□□□□ -1.54
CDR2-203ENST00000563573 RWDD3Q9Y3V2 267 aa5.44□□□□□ -1.54
CDR2-203ENST00000563573 RBM8AQ9Y5S9 174 aaKnown RBP5.44□□□□□ -1.54
CDR2-203ENST00000563573 HCFC2Q9Y5Z7 792 aa5.44□□□□□ -1.54
CDR2-203ENST00000563573 SLC4A4Q9Y6R1 1079 aa5.44□□□□□ -1.54
CDR2-203ENST00000563573 MROH7-TTC4A0A0A0MT08 1334 aa5.44□□□□□ -1.54
CDR2-203ENST00000563573 GPR75-ASB3A0A0A6YYF3 556 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms