RNA–Protein interactions for RNA: ENST00000563240.1

LPCAT4-204, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 939 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-204ENST00000563240 COL9A1P20849 921 aa16.94■□□□□ 0.3
LPCAT4-204ENST00000563240 TOB1P50616 345 aaPredicted RBP16.94■□□□□ 0.3
LPCAT4-204ENST00000563240 ZP2Q05996 745 aa16.94■□□□□ 0.3
LPCAT4-204ENST00000563240 NCBP1Q09161 790 aaKnown RBP16.94■□□□□ 0.3
LPCAT4-204ENST00000563240 SMAD2Q15796 467 aaKnown RBP16.94■□□□□ 0.3
LPCAT4-204ENST00000563240 CDR2LQ86X02 465 aaPredicted RBP16.94■□□□□ 0.3
LPCAT4-204ENST00000563240 ZNF280BQ86YH2 543 aa16.94■□□□□ 0.3
LPCAT4-204ENST00000563240 URGCPQ8TCY9 931 aa16.94■□□□□ 0.3
LPCAT4-204ENST00000563240 TMEM169Q96HH4 297 aa16.94■□□□□ 0.3
LPCAT4-204ENST00000563240 TMX3Q96JJ7 454 aa16.94■□□□□ 0.3
LPCAT4-204ENST00000563240 NACC1Q96RE7 527 aa16.94■□□□□ 0.3
LPCAT4-204ENST00000563240 POLR3CQ9BUI4 534 aaPredicted RBP16.94■□□□□ 0.3
LPCAT4-204ENST00000563240 APOL6Q9BWW8 343 aa16.94■□□□□ 0.3
LPCAT4-204ENST00000563240 C1QTNF1Q9BXJ1 281 aa16.94■□□□□ 0.3
LPCAT4-204ENST00000563240 EIF2AQ9BY44 585 aaKnown RBP16.94■□□□□ 0.3
LPCAT4-204ENST00000563240 RNF39Q9H2S5 420 aa16.94■□□□□ 0.3
LPCAT4-204ENST00000563240 RSAD1Q9HA92 442 aa16.94■□□□□ 0.3
LPCAT4-204ENST00000563240 POLD4Q9HCU8 107 aa16.94■□□□□ 0.3
LPCAT4-204ENST00000563240 NGRNQ9NPE2 291 aaKnown RBP16.94■□□□□ 0.3
LPCAT4-204ENST00000563240 DNAJB4Q9UDY4 337 aa16.94■□□□□ 0.3
LPCAT4-204ENST00000563240 PCDHB6Q9Y5E3 794 aa16.94■□□□□ 0.3
LPCAT4-204ENST00000563240 NCOR1O75376 2440 aa16.94■□□□□ 0.3
LPCAT4-204ENST00000563240 FAM86C2PA6NEL3 165 aa16.93■□□□□ 0.3
LPCAT4-204ENST00000563240 LRRIQ4A6NIV6 560 aa16.93■□□□□ 0.3
LPCAT4-204ENST00000563240 B4GALT5O43286 388 aa16.93■□□□□ 0.3
LPCAT4-204ENST00000563240 B4GALT3O60512 393 aa16.93■□□□□ 0.3
LPCAT4-204ENST00000563240 CXCL14O95715 111 aa16.93■□□□□ 0.3
LPCAT4-204ENST00000563240 ITGA4P13612 1032 aa16.93■□□□□ 0.3
LPCAT4-204ENST00000563240 U2AF2P26368 475 aaKnown RBP eCLIP16.93■□□□□ 0.3
LPCAT4-204ENST00000563240 CCT6AP40227 531 aaKnown RBP16.93■□□□□ 0.3
LPCAT4-204ENST00000563240 TRAPPC10P48553 1259 aa16.93■□□□□ 0.3
LPCAT4-204ENST00000563240 MBTD1Q05BQ5 628 aa16.93■□□□□ 0.3
LPCAT4-204ENST00000563240 PADI6Q6TGC4 694 aa16.93■□□□□ 0.3
LPCAT4-204ENST00000563240 MRPL10Q7Z7H8 261 aaKnown RBP16.93■□□□□ 0.3
LPCAT4-204ENST00000563240 ADHFE1Q8IWW8 467 aa16.93■□□□□ 0.3
LPCAT4-204ENST00000563240 VPS52Q8N1B4 723 aa16.93■□□□□ 0.3
LPCAT4-204ENST00000563240 C4orf32Q8N8J7 132 aa16.93■□□□□ 0.3
LPCAT4-204ENST00000563240 SMG8Q8ND04 991 aaKnown RBP16.93■□□□□ 0.3
LPCAT4-204ENST00000563240 AUTS2Q8WXX7 1259 aa16.93■□□□□ 0.3
LPCAT4-204ENST00000563240 FAM193BQ96PV7 902 aaPredicted RBP16.93■□□□□ 0.3
LPCAT4-204ENST00000563240 HES2Q9Y543 173 aa16.93■□□□□ 0.3
LPCAT4-204ENST00000563240 ARHGEF35A5YM69 484 aa16.92■□□□□ 0.3
LPCAT4-204ENST00000563240 DDHD2O94830 711 aa16.92■□□□□ 0.3
LPCAT4-204ENST00000563240 GALTP07902 379 aa16.92■□□□□ 0.3
LPCAT4-204ENST00000563240 LIG1P18858 919 aa16.92■□□□□ 0.3
LPCAT4-204ENST00000563240 RPA1P27694 616 aa16.92■□□□□ 0.3
LPCAT4-204ENST00000563240 SLC11A1P49279 550 aa16.92■□□□□ 0.3
LPCAT4-204ENST00000563240 PTGDRQ13258 359 aa16.92■□□□□ 0.3
LPCAT4-204ENST00000563240 ORC2Q13416 577 aaPredicted RBP16.92■□□□□ 0.3
LPCAT4-204ENST00000563240 SMC1AQ14683 1233 aaKnown RBP16.92■□□□□ 0.3
LPCAT4-204ENST00000563240 ECM1Q16610 540 aa16.92■□□□□ 0.3
LPCAT4-204ENST00000563240 NOTUMQ6P988 496 aa16.92■□□□□ 0.3
LPCAT4-204ENST00000563240 MRPL43Q8N983 215 aaKnown RBP16.92■□□□□ 0.3
LPCAT4-204ENST00000563240 BCL7CQ8WUZ0 217 aaPredicted RBP16.92■□□□□ 0.3
LPCAT4-204ENST00000563240 IGSF21Q96ID5 467 aa16.92■□□□□ 0.3
LPCAT4-204ENST00000563240 CDCA3Q99618 268 aaPredicted RBP16.92■□□□□ 0.3
LPCAT4-204ENST00000563240 CSRNP2Q9H175 543 aa16.92■□□□□ 0.3
LPCAT4-204ENST00000563240 LRWD1Q9UFC0 647 aa16.92■□□□□ 0.3
LPCAT4-204ENST00000563240 PRKAG3Q9UGI9 489 aa16.92■□□□□ 0.3
LPCAT4-204ENST00000563240 DBR1Q9UK59 544 aaKnown RBP16.92■□□□□ 0.3
LPCAT4-204ENST00000563240 IPPQ9Y573 584 aa16.92■□□□□ 0.3
LPCAT4-204ENST00000563240 MUC3AQ02505 3323 aa16.92■□□□□ 0.3
LPCAT4-204ENST00000563240 C2orf71A6NGG8 1288 aa16.91■□□□□ 0.3
LPCAT4-204ENST00000563240 PI4K2BG5E9Z4 385 aa16.91■□□□□ 0.3
LPCAT4-204ENST00000563240 EYA4O95677 639 aa16.91■□□□□ 0.3
LPCAT4-204ENST00000563240 ARF4P18085 180 aaPredicted RBP16.91■□□□□ 0.3
LPCAT4-204ENST00000563240 NCLP19338 710 aaKnown RBP16.91■□□□□ 0.3
LPCAT4-204ENST00000563240 COASYQ13057 564 aa16.91■□□□□ 0.3
LPCAT4-204ENST00000563240 TMEM87AQ8NBN3 555 aa16.91■□□□□ 0.3
LPCAT4-204ENST00000563240 SMRP1Q8NCR6 262 aa16.91■□□□□ 0.3
LPCAT4-204ENST00000563240 GAD1Q99259 594 aa16.91■□□□□ 0.3
LPCAT4-204ENST00000563240 TRIM6Q9C030 488 aaPredicted RBP16.91■□□□□ 0.3
LPCAT4-204ENST00000563240 KIF3AQ9Y496 699 aa16.91■□□□□ 0.3
LPCAT4-204ENST00000563240 USP15Q9Y4E8 981 aaPredicted RBP16.91■□□□□ 0.3
LPCAT4-204ENST00000563240 PP2D1A8MPX8 630 aa16.9■□□□□ 0.3
LPCAT4-204ENST00000563240 H3BQV1 296 aa16.9■□□□□ 0.3
LPCAT4-204ENST00000563240 NPTXRO95502 500 aa16.9■□□□□ 0.3
LPCAT4-204ENST00000563240 ALDH2P05091 517 aa16.9■□□□□ 0.3
LPCAT4-204ENST00000563240 SSBP05455 408 aaKnown RBP eCLIP16.9■□□□□ 0.3
LPCAT4-204ENST00000563240 GJB2P29033 226 aa16.9■□□□□ 0.3
LPCAT4-204ENST00000563240 AXLP30530 894 aa16.9■□□□□ 0.3
LPCAT4-204ENST00000563240 MLH1P40692 756 aa16.9■□□□□ 0.3
LPCAT4-204ENST00000563240 FXR2P51116 673 aaKnown RBP eCLIP16.9■□□□□ 0.3
LPCAT4-204ENST00000563240 POU5F1BQ06416 359 aa16.9■□□□□ 0.3
LPCAT4-204ENST00000563240 BMS1Q14692 1282 aaKnown RBP16.9■□□□□ 0.3
LPCAT4-204ENST00000563240 PCBP1Q15365 356 aaKnown RBP eCLIP16.9■□□□□ 0.3
LPCAT4-204ENST00000563240 AMHR2Q16671 573 aa16.9■□□□□ 0.3
LPCAT4-204ENST00000563240 TMEM132AQ24JP5 1023 aa16.9■□□□□ 0.3
LPCAT4-204ENST00000563240 TMEM31Q5JXX7 168 aa16.9■□□□□ 0.3
LPCAT4-204ENST00000563240 HAUS3Q68CZ6 603 aa16.9■□□□□ 0.3
LPCAT4-204ENST00000563240 ANKRD54Q6NXT1 300 aa16.9■□□□□ 0.3
LPCAT4-204ENST00000563240 IFNLR1Q8IU57 520 aaPredicted RBP16.9■□□□□ 0.3
LPCAT4-204ENST00000563240 CNNM3Q8NE01 707 aa16.9■□□□□ 0.3
LPCAT4-204ENST00000563240 MCPH1Q8NEM0 835 aa16.9■□□□□ 0.3
LPCAT4-204ENST00000563240 BSNDQ8WZ55 320 aa16.9■□□□□ 0.3
LPCAT4-204ENST00000563240 ZFP42Q96MM3 310 aa16.9■□□□□ 0.3
LPCAT4-204ENST00000563240 LRFN3Q9BTN0 628 aa16.9■□□□□ 0.3
LPCAT4-204ENST00000563240 NXF3Q9H4D5 531 aaKnown RBP16.9■□□□□ 0.3
LPCAT4-204ENST00000563240 KANSL3Q9P2N6 904 aa16.9■□□□□ 0.3
LPCAT4-204ENST00000563240 KIAA1024Q9UPX6 916 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms