RNA–Protein interactions for RNA: ENST00000559491.1

RNF31-215, Transcript of ring finger protein 31, human

TSL 2

Gene RNF31, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-215	ENST00000559491	PCDHB2	Q9Y5E7	798 aa		12.84	□□□□□ -0.35
RNF31-215	ENST00000559491	ZDBF2	Q9HCK1	2354 aa		12.83	□□□□□ -0.36
RNF31-215	ENST00000559491	FSD2	A1L4K1	749 aa		12.83	□□□□□ -0.36
RNF31-215	ENST00000559491	C2CD4D	B7Z1M9	353 aa		12.83	□□□□□ -0.36
RNF31-215	ENST00000559491	TBX3	O15119	743 aa		12.83	□□□□□ -0.36
RNF31-215	ENST00000559491	SLITRK3	O94933	977 aa		12.83	□□□□□ -0.36
RNF31-215	ENST00000559491	PDGFB	P01127	241 aa	Predicted RBP	12.83	□□□□□ -0.36
RNF31-215	ENST00000559491	SRGAP2B	P0DMP2	458 aa		12.83	□□□□□ -0.36
RNF31-215	ENST00000559491	RAB27A	P51159	221 aa		12.83	□□□□□ -0.36
RNF31-215	ENST00000559491	ST3GAL1	Q11201	340 aa		12.83	□□□□□ -0.36
RNF31-215	ENST00000559491	RARS2	Q5T160	578 aa	Known RBP	12.83	□□□□□ -0.36
RNF31-215	ENST00000559491	GLB1L	Q6UWU2	654 aa		12.83	□□□□□ -0.36
RNF31-215	ENST00000559491	BMP8A	Q7Z5Y6	402 aa		12.83	□□□□□ -0.36
RNF31-215	ENST00000559491	MRPL10	Q7Z7H8	261 aa	Known RBP	12.83	□□□□□ -0.36
RNF31-215	ENST00000559491	DDX53	Q86TM3	631 aa	Known RBP	12.83	□□□□□ -0.36
RNF31-215	ENST00000559491	FERMT3	Q86UX7	667 aa		12.83	□□□□□ -0.36
RNF31-215	ENST00000559491	TPH2	Q8IWU9	490 aa		12.83	□□□□□ -0.36
RNF31-215	ENST00000559491	SMG8	Q8ND04	991 aa	Known RBP	12.83	□□□□□ -0.36
RNF31-215	ENST00000559491	PSPC1	Q8WXF1	523 aa	Known RBP	12.83	□□□□□ -0.36
RNF31-215	ENST00000559491	SLC7A3	Q8WY07	619 aa		12.83	□□□□□ -0.36
RNF31-215	ENST00000559491	ASIC4	Q96FT7	647 aa		12.83	□□□□□ -0.36
RNF31-215	ENST00000559491	EIF2A	Q9BY44	585 aa	Known RBP	12.83	□□□□□ -0.36
RNF31-215	ENST00000559491	RNF39	Q9H2S5	420 aa		12.83	□□□□□ -0.36
RNF31-215	ENST00000559491	BTBD18	B2RXH4	712 aa		12.82	□□□□□ -0.36
RNF31-215	ENST00000559491	MARCH6	O60337	910 aa		12.82	□□□□□ -0.36
RNF31-215	ENST00000559491	JAK2	O60674	1132 aa		12.82	□□□□□ -0.36
RNF31-215	ENST00000559491	POMC	P01189	267 aa		12.82	□□□□□ -0.36
RNF31-215	ENST00000559491	SSB	P05455	408 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
RNF31-215	ENST00000559491	CTSA	P10619	480 aa		12.82	□□□□□ -0.36
RNF31-215	ENST00000559491	HOXB8	P17481	243 aa	Predicted RBP	12.82	□□□□□ -0.36
RNF31-215	ENST00000559491	XBP1	P17861	261 aa		12.82	□□□□□ -0.36
RNF31-215	ENST00000559491	KRT2	P35908	639 aa		12.82	□□□□□ -0.36
RNF31-215	ENST00000559491	RFC5	P40937	340 aa		12.82	□□□□□ -0.36
RNF31-215	ENST00000559491	MRE11	P49959	708 aa		12.82	□□□□□ -0.36
RNF31-215	ENST00000559491	VCP	P55072	806 aa	Known RBP	12.82	□□□□□ -0.36
RNF31-215	ENST00000559491	RNASEL	Q05823	741 aa	Known RBP	12.82	□□□□□ -0.36
RNF31-215	ENST00000559491	SIGLEC14	Q08ET2	396 aa		12.82	□□□□□ -0.36
RNF31-215	ENST00000559491	PTPN21	Q16825	1174 aa		12.82	□□□□□ -0.36
RNF31-215	ENST00000559491	SRGAP1	Q7Z6B7	1085 aa		12.82	□□□□□ -0.36
RNF31-215	ENST00000559491	RNF149	Q8NC42	400 aa		12.82	□□□□□ -0.36
RNF31-215	ENST00000559491	NSUN7	Q8NE18	718 aa	Known RBP	12.82	□□□□□ -0.36
RNF31-215	ENST00000559491	ASAP3	Q8TDY4	903 aa		12.82	□□□□□ -0.36
RNF31-215	ENST00000559491	SLC22A17	Q8WUG5	538 aa		12.82	□□□□□ -0.36
RNF31-215	ENST00000559491	GTF3C6	Q969F1	213 aa		12.82	□□□□□ -0.36
RNF31-215	ENST00000559491	CPB2	Q96IY4	423 aa		12.82	□□□□□ -0.36
RNF31-215	ENST00000559491	MFSD14A	Q96MC6	490 aa		12.82	□□□□□ -0.36
RNF31-215	ENST00000559491	EIF2AK1	Q9BQI3	630 aa	Known RBP	12.82	□□□□□ -0.36
RNF31-215	ENST00000559491	JPH2	Q9BR39	696 aa	Predicted RBP	12.82	□□□□□ -0.36
RNF31-215	ENST00000559491	RSAD1	Q9HA92	442 aa		12.82	□□□□□ -0.36
RNF31-215	ENST00000559491	MIOS	Q9NXC5	875 aa		12.82	□□□□□ -0.36
RNF31-215	ENST00000559491	IRAK3	Q9Y616	596 aa		12.82	□□□□□ -0.36
RNF31-215	ENST00000559491	DOCK8	Q8NF50	2099 aa		12.82	□□□□□ -0.36
RNF31-215	ENST00000559491		F8W810	466 aa		12.81	□□□□□ -0.36
RNF31-215	ENST00000559491	TSPAN1	O60635	241 aa		12.81	□□□□□ -0.36
RNF31-215	ENST00000559491	DKC1	O60832	514 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
RNF31-215	ENST00000559491	SKI	P12755	728 aa		12.81	□□□□□ -0.36
RNF31-215	ENST00000559491	PTPN14	Q15678	1187 aa		12.81	□□□□□ -0.36
RNF31-215	ENST00000559491	TPRN	Q4KMQ1	711 aa		12.81	□□□□□ -0.36
RNF31-215	ENST00000559491	TAS1R1	Q7RTX1	841 aa		12.81	□□□□□ -0.36
RNF31-215	ENST00000559491	CDR2L	Q86X02	465 aa	Predicted RBP	12.81	□□□□□ -0.36
RNF31-215	ENST00000559491	FBXL6	Q8N531	539 aa		12.81	□□□□□ -0.36
RNF31-215	ENST00000559491	PGBD4	Q96DM1	585 aa		12.81	□□□□□ -0.36
RNF31-215	ENST00000559491	MTR	Q99707	1265 aa		12.81	□□□□□ -0.36
RNF31-215	ENST00000559491	ADAM7	Q9H2U9	754 aa		12.81	□□□□□ -0.36
RNF31-215	ENST00000559491	ZSWIM4	Q9H7M6	989 aa		12.81	□□□□□ -0.36
RNF31-215	ENST00000559491	HES2	Q9Y543	173 aa		12.81	□□□□□ -0.36
RNF31-215	ENST00000559491	VWA8	A3KMH1	1905 aa		12.81	□□□□□ -0.36
RNF31-215	ENST00000559491	NRP1	O14786	923 aa		12.8	□□□□□ -0.36
RNF31-215	ENST00000559491	B4GALT5	O43286	388 aa		12.8	□□□□□ -0.36
RNF31-215	ENST00000559491	BRD1	O95696	1058 aa		12.8	□□□□□ -0.36
RNF31-215	ENST00000559491	ASGR2	P07307	311 aa		12.8	□□□□□ -0.36
RNF31-215	ENST00000559491	NCL	P19338	710 aa	Known RBP	12.8	□□□□□ -0.36
RNF31-215	ENST00000559491	ANAPC15	P60006	121 aa		12.8	□□□□□ -0.36
RNF31-215	ENST00000559491	PTEN	P60484	403 aa		12.8	□□□□□ -0.36
RNF31-215	ENST00000559491	ITIH3	Q06033	890 aa		12.8	□□□□□ -0.36
RNF31-215	ENST00000559491	CAPS	Q13938	189 aa		12.8	□□□□□ -0.36
RNF31-215	ENST00000559491	TMC5	Q6UXY8	1006 aa		12.8	□□□□□ -0.36
RNF31-215	ENST00000559491	OTUD6A	Q7L8S5	288 aa		12.8	□□□□□ -0.36
RNF31-215	ENST00000559491	SLFN12	Q8IYM2	578 aa		12.8	□□□□□ -0.36
RNF31-215	ENST00000559491	KREMEN2	Q8NCW0	462 aa		12.8	□□□□□ -0.36
RNF31-215	ENST00000559491	PIGO	Q8TEQ8	1089 aa		12.8	□□□□□ -0.36
RNF31-215	ENST00000559491	TCP11	Q8WWU5	503 aa		12.8	□□□□□ -0.36
RNF31-215	ENST00000559491	ZFP42	Q96MM3	310 aa		12.8	□□□□□ -0.36
RNF31-215	ENST00000559491	KLHL5	Q96PQ7	755 aa		12.8	□□□□□ -0.36
RNF31-215	ENST00000559491	NAP1L4	Q99733	375 aa	Known RBP	12.8	□□□□□ -0.36
RNF31-215	ENST00000559491	HSD17B14	Q9BPX1	270 aa		12.8	□□□□□ -0.36
RNF31-215	ENST00000559491	KCNH6	Q9H252	994 aa		12.8	□□□□□ -0.36
RNF31-215	ENST00000559491	TMEM60	Q9H2L4	133 aa		12.8	□□□□□ -0.36
RNF31-215	ENST00000559491	TTC12	Q9H892	705 aa	Predicted RBP	12.8	□□□□□ -0.36
RNF31-215	ENST00000559491	MARCH5	Q9NX47	278 aa		12.8	□□□□□ -0.36
RNF31-215	ENST00000559491	PPME1	Q9Y570	386 aa		12.8	□□□□□ -0.36
RNF31-215	ENST00000559491	IPP	Q9Y573	584 aa		12.8	□□□□□ -0.36
RNF31-215	ENST00000559491	POTEM	A6NI47	508 aa		12.79	□□□□□ -0.36
RNF31-215	ENST00000559491	LILRB3	O75022	631 aa		12.79	□□□□□ -0.36
RNF31-215	ENST00000559491	BAG4	O95429	457 aa	Known RBP	12.79	□□□□□ -0.36
RNF31-215	ENST00000559491	CNP	P09543	421 aa	Known RBP	12.79	□□□□□ -0.36
RNF31-215	ENST00000559491	MYB	P10242	640 aa		12.79	□□□□□ -0.36
RNF31-215	ENST00000559491	TXK	P42681	527 aa		12.79	□□□□□ -0.36
RNF31-215	ENST00000559491	GUCY1B3	Q02153	619 aa		12.79	□□□□□ -0.36
RNF31-215	ENST00000559491	MBTD1	Q05BQ5	628 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms