RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 ALDH2P05091 517 aa14.05□□□□□ -0.16
CASC4-208ENST00000559151 NBPF7P0C2Y1 421 aaPredicted RBP14.05□□□□□ -0.16
CASC4-208ENST00000559151 SEPT2Q15019 361 aa14.05□□□□□ -0.16
CASC4-208ENST00000559151 EIF4HQ15056 248 aaKnown RBP14.05□□□□□ -0.16
CASC4-208ENST00000559151 USP25Q9UHP3 1055 aa14.05□□□□□ -0.16
CASC4-208ENST00000559151 PCDHA13Q9Y5I0 950 aa14.05□□□□□ -0.16
CASC4-208ENST00000559151 TUSC2O75896 110 aa14.04□□□□□ -0.16
CASC4-208ENST00000559151 FSBPO95073 299 aa14.04□□□□□ -0.16
CASC4-208ENST00000559151 CTSSP25774 331 aa14.04□□□□□ -0.16
CASC4-208ENST00000559151 NEK3P51956 506 aa14.04□□□□□ -0.16
CASC4-208ENST00000559151 TOP3AQ13472 1001 aaPredicted RBP14.04□□□□□ -0.16
CASC4-208ENST00000559151 SAFBQ15424 915 aaKnown RBP eCLIP14.04□□□□□ -0.16
CASC4-208ENST00000559151 ABHD15Q6UXT9 468 aa14.04□□□□□ -0.16
CASC4-208ENST00000559151 PIK3C3Q8NEB9 887 aa14.04□□□□□ -0.16
CASC4-208ENST00000559151 ZNF700Q9H0M5 742 aa14.04□□□□□ -0.16
CASC4-208ENST00000559151 FAM204AQ9H8W3 233 aa14.04□□□□□ -0.16
CASC4-208ENST00000559151 SPATA6Q9NWH7 488 aaPredicted RBP14.04□□□□□ -0.16
CASC4-208ENST00000559151 B3GALT2O43825 422 aa14.03□□□□□ -0.16
CASC4-208ENST00000559151 AKR1B10O60218 316 aa14.03□□□□□ -0.16
CASC4-208ENST00000559151 GAAP10253 952 aa14.03□□□□□ -0.16
CASC4-208ENST00000559151 ZNF28P17035 718 aa14.03□□□□□ -0.16
CASC4-208ENST00000559151 RHCEP18577 417 aa14.03□□□□□ -0.16
CASC4-208ENST00000559151 POLD1P28340 1107 aa14.03□□□□□ -0.16
CASC4-208ENST00000559151 IL13P35225 146 aa14.03□□□□□ -0.16
CASC4-208ENST00000559151 RHDQ02161 417 aa14.03□□□□□ -0.16
CASC4-208ENST00000559151 BRD3Q15059 726 aa14.03□□□□□ -0.16
CASC4-208ENST00000559151 MAN2A1Q16706 1144 aa14.03□□□□□ -0.16
CASC4-208ENST00000559151 NUDT10Q8NFP7 164 aa14.03□□□□□ -0.16
CASC4-208ENST00000559151 FNIP1Q8TF40 1166 aa14.03□□□□□ -0.16
CASC4-208ENST00000559151 KCNN1Q92952 543 aa14.03□□□□□ -0.16
CASC4-208ENST00000559151 NUDT11Q96G61 164 aa14.03□□□□□ -0.16
CASC4-208ENST00000559151 PRAMEF4O60810 478 aa14.02□□□□□ -0.17
CASC4-208ENST00000559151 KLHL18O94889 574 aa14.02□□□□□ -0.17
CASC4-208ENST00000559151 LTA4HP09960 611 aaKnown RBP14.02□□□□□ -0.17
CASC4-208ENST00000559151 MEF2AQ02078 507 aaPredicted RBP14.02□□□□□ -0.17
CASC4-208ENST00000559151 SRGAP1Q7Z6B7 1085 aa14.02□□□□□ -0.17
CASC4-208ENST00000559151 FAM156AQ8NDB6 213 aa14.02□□□□□ -0.17
CASC4-208ENST00000559151 CGRRF1Q99675 332 aa14.02□□□□□ -0.17
CASC4-208ENST00000559151 RPTORQ8N122 1335 aa14.01□□□□□ -0.17
CASC4-208ENST00000559151 FAM171A2A8MVW0 826 aa14.01□□□□□ -0.17
CASC4-208ENST00000559151 ZBED1O96006 694 aa14.01□□□□□ -0.17
CASC4-208ENST00000559151 HMGCRP04035 888 aa14.01□□□□□ -0.17
CASC4-208ENST00000559151 ADSLP30566 484 aaPredicted RBP14.01□□□□□ -0.17
CASC4-208ENST00000559151 DSC2Q02487 901 aa14.01□□□□□ -0.17
CASC4-208ENST00000559151 IFNL2Q8IZJ0 200 aa14.01□□□□□ -0.17
CASC4-208ENST00000559151 UNC5BQ8IZJ1 945 aa14.01□□□□□ -0.17
CASC4-208ENST00000559151 FBXO41Q8TF61 875 aa14.01□□□□□ -0.17
CASC4-208ENST00000559151 HOXB13Q92826 284 aaPredicted RBP14.01□□□□□ -0.17
CASC4-208ENST00000559151 SIGLEC10Q96LC7 697 aa14.01□□□□□ -0.17
CASC4-208ENST00000559151 C7orf25Q9BPX7 421 aa14.01□□□□□ -0.17
CASC4-208ENST00000559151 LRFN3Q9BTN0 628 aa14.01□□□□□ -0.17
CASC4-208ENST00000559151 B3GNT5Q9BYG0 378 aa14.01□□□□□ -0.17
CASC4-208ENST00000559151 RIPOR2Q9Y4F9 1068 aa14.01□□□□□ -0.17
CASC4-208ENST00000559151 CFAP20Q9Y6A4 193 aaKnown RBP14.01□□□□□ -0.17
CASC4-208ENST00000559151 PHKG2P15735 406 aa14□□□□□ -0.17
CASC4-208ENST00000559151 ETV4P43268 484 aa14□□□□□ -0.17
CASC4-208ENST00000559151 UBE3CQ15386 1083 aa14□□□□□ -0.17
CASC4-208ENST00000559151 FAM180AQ6UWF9 173 aa14□□□□□ -0.17
CASC4-208ENST00000559151 CCDC149Q6ZUS6 474 aa14□□□□□ -0.17
CASC4-208ENST00000559151 FAM43AQ8N2R8 423 aa14□□□□□ -0.17
CASC4-208ENST00000559151 SAMD3Q8N6K7 520 aa14□□□□□ -0.17
CASC4-208ENST00000559151 TMEM60Q9H2L4 133 aa14□□□□□ -0.17
CASC4-208ENST00000559151 IRAK3Q9Y616 596 aa14□□□□□ -0.17
CASC4-208ENST00000559151 FAM227AF5H4B4 570 aa13.99□□□□□ -0.17
CASC4-208ENST00000559151 HTR1BP28222 390 aa13.99□□□□□ -0.17
CASC4-208ENST00000559151 PICALMQ13492 652 aa13.99□□□□□ -0.17
CASC4-208ENST00000559151 LARP4Q71RC2 724 aaKnown RBP eCLIP13.99□□□□□ -0.17
CASC4-208ENST00000559151 RHOT1Q8IXI2 618 aa13.99□□□□□ -0.17
CASC4-208ENST00000559151 MSL3Q8N5Y2 521 aaKnown RBP13.99□□□□□ -0.17
CASC4-208ENST00000559151 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.99□□□□□ -0.17
CASC4-208ENST00000559151 SNX33Q8WV41 574 aa13.99□□□□□ -0.17
CASC4-208ENST00000559151 RAB24Q969Q5 203 aa13.99□□□□□ -0.17
CASC4-208ENST00000559151 EPB41L4AQ9HCS5 686 aaPredicted RBP13.99□□□□□ -0.17
CASC4-208ENST00000559151 PCDHB1Q9Y5F3 818 aa13.99□□□□□ -0.17
CASC4-208ENST00000559151 ANO9A1A5B4 782 aa13.98□□□□□ -0.17
CASC4-208ENST00000559151 ETV2O00321 342 aaPredicted RBP13.98□□□□□ -0.17
CASC4-208ENST00000559151 PMM2O15305 246 aa13.98□□□□□ -0.17
CASC4-208ENST00000559151 TRIM68Q6AZZ1 485 aa13.98□□□□□ -0.17
CASC4-208ENST00000559151 Q6ZVL8 140 aa13.98□□□□□ -0.17
CASC4-208ENST00000559151 RTKN2Q8IZC4 609 aa13.98□□□□□ -0.17
CASC4-208ENST00000559151 UIMC1Q96RL1 719 aa13.98□□□□□ -0.17
CASC4-208ENST00000559151 L2HGDHQ9H9P8 463 aa13.98□□□□□ -0.17
CASC4-208ENST00000559151 DDX3XO00571 662 aaKnown RBP eCLIP13.97□□□□□ -0.17
CASC4-208ENST00000559151 RPL13P26373 211 aaKnown RBP13.97□□□□□ -0.17
CASC4-208ENST00000559151 MAP2K6P52564 334 aa13.97□□□□□ -0.17
CASC4-208ENST00000559151 DLX2Q07687 328 aaPredicted RBP13.97□□□□□ -0.17
CASC4-208ENST00000559151 OS9Q13438 667 aaPredicted RBP13.97□□□□□ -0.17
CASC4-208ENST00000559151 ADAM15Q13444 863 aa13.97□□□□□ -0.17
CASC4-208ENST00000559151 NPNTQ6UXI9 565 aa13.97□□□□□ -0.17
CASC4-208ENST00000559151 RGMAQ96B86 450 aa13.97□□□□□ -0.17
CASC4-208ENST00000559151 FTLP02792 175 aaPredicted RBP13.96□□□□□ -0.17
CASC4-208ENST00000559151 SLC6A9P48067 706 aa13.96□□□□□ -0.17
CASC4-208ENST00000559151 SSPNQ14714 243 aa13.96□□□□□ -0.17
CASC4-208ENST00000559151 MST1LQ2TV78 715 aa13.96□□□□□ -0.17
CASC4-208ENST00000559151 PPP4R3AQ6IN85 833 aa13.96□□□□□ -0.17
CASC4-208ENST00000559151 TAS1R1Q7RTX1 841 aa13.96□□□□□ -0.17
CASC4-208ENST00000559151 DRC7Q8IY82 874 aa13.96□□□□□ -0.17
CASC4-208ENST00000559151 KIAA0319LQ8IZA0 1049 aa13.96□□□□□ -0.17
CASC4-208ENST00000559151 KMT5AQ9NQR1 393 aa13.96□□□□□ -0.17
CASC4-208ENST00000559151 TLR9Q9NR96 1032 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms