RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 WDR81Q562E7 1941 aa9.38□□□□□ -0.91
TPM1-213ENST00000558400 MICAL3Q7RTP6 2002 aa9.38□□□□□ -0.91
TPM1-213ENST00000558400 A0A1B0GUA9 196 aa9.37□□□□□ -0.91
TPM1-213ENST00000558400 PP2D1A8MPX8 630 aa9.37□□□□□ -0.91
TPM1-213ENST00000558400 K7ERI5 159 aa9.37□□□□□ -0.91
TPM1-213ENST00000558400 RFXAPO00287 272 aa9.37□□□□□ -0.91
TPM1-213ENST00000558400 NCK2O43639 380 aa9.37□□□□□ -0.91
TPM1-213ENST00000558400 LPXNO60711 386 aa9.37□□□□□ -0.91
TPM1-213ENST00000558400 PLA2G4BP0C869 781 aa9.37□□□□□ -0.91
TPM1-213ENST00000558400 ZSCAN22P10073 491 aaPredicted RBP9.37□□□□□ -0.91
TPM1-213ENST00000558400 IBSPP21815 317 aaPredicted RBP9.37□□□□□ -0.91
TPM1-213ENST00000558400 SCP2P22307 547 aa9.37□□□□□ -0.91
TPM1-213ENST00000558400 GUCY2CP25092 1073 aa9.37□□□□□ -0.91
TPM1-213ENST00000558400 CTNNB1P35222 781 aa9.37□□□□□ -0.91
TPM1-213ENST00000558400 DDIT3P35638 169 aa9.37□□□□□ -0.91
TPM1-213ENST00000558400 SMTNP53814 917 aa9.37□□□□□ -0.91
TPM1-213ENST00000558400 UBE3AQ05086 875 aa9.37□□□□□ -0.91
TPM1-213ENST00000558400 MBTD1Q05BQ5 628 aa9.37□□□□□ -0.91
TPM1-213ENST00000558400 PTPAQ15257 358 aa9.37□□□□□ -0.91
TPM1-213ENST00000558400 PAN2Q504Q3 1202 aaKnown RBP9.37□□□□□ -0.91
TPM1-213ENST00000558400 TMEM31Q5JXX7 168 aa9.37□□□□□ -0.91
TPM1-213ENST00000558400 SPOUT1Q5T280 376 aaKnown RBP9.37□□□□□ -0.91
TPM1-213ENST00000558400 GLB1LQ6UWU2 654 aa9.37□□□□□ -0.91
TPM1-213ENST00000558400 C1orf186Q6ZWK4 172 aa9.37□□□□□ -0.91
TPM1-213ENST00000558400 APBB1IPQ7Z5R6 666 aaPredicted RBP9.37□□□□□ -0.91
TPM1-213ENST00000558400 RASSF8Q8NHQ8 419 aa9.37□□□□□ -0.91
TPM1-213ENST00000558400 CASD1Q96PB1 797 aa9.37□□□□□ -0.91
TPM1-213ENST00000558400 CSRNP2Q9H175 543 aa9.37□□□□□ -0.91
TPM1-213ENST00000558400 FZD8Q9H461 694 aa9.37□□□□□ -0.91
TPM1-213ENST00000558400 GPRC5CQ9NQ84 441 aa9.37□□□□□ -0.91
TPM1-213ENST00000558400 TYW1Q9NV66 732 aaKnown RBP9.37□□□□□ -0.91
TPM1-213ENST00000558400 PUF60Q9UHX1 559 aaKnown RBP9.37□□□□□ -0.91
TPM1-213ENST00000558400 CFAP45Q9UL16 551 aa9.37□□□□□ -0.91
TPM1-213ENST00000558400 PCDHB2Q9Y5E7 798 aa9.37□□□□□ -0.91
TPM1-213ENST00000558400 MRPL42Q9Y6G3 142 aaKnown RBP9.37□□□□□ -0.91
TPM1-213ENST00000558400 CNTNAP2Q9UHC6 1331 aa9.36□□□□□ -0.91
TPM1-213ENST00000558400 EPOPA6NHQ4 379 aa9.36□□□□□ -0.91
TPM1-213ENST00000558400 H0YCG3 227 aa9.36□□□□□ -0.91
TPM1-213ENST00000558400 ACKR2O00590 384 aa9.36□□□□□ -0.91
TPM1-213ENST00000558400 TSPAN1O60635 241 aa9.36□□□□□ -0.91
TPM1-213ENST00000558400 PPP6R2O75170 966 aa9.36□□□□□ -0.91
TPM1-213ENST00000558400 SSBP05455 408 aaKnown RBP eCLIP9.36□□□□□ -0.91
TPM1-213ENST00000558400 FGFR1P11362 822 aa9.36□□□□□ -0.91
TPM1-213ENST00000558400 LAG3P18627 525 aa9.36□□□□□ -0.91
TPM1-213ENST00000558400 NCLP19338 710 aaKnown RBP9.36□□□□□ -0.91
TPM1-213ENST00000558400 MARCKSP29966 332 aaPredicted RBP9.36□□□□□ -0.91
TPM1-213ENST00000558400 ABCD1P33897 745 aa9.36□□□□□ -0.91
TPM1-213ENST00000558400 NASPP49321 788 aaPredicted RBP9.36□□□□□ -0.91
TPM1-213ENST00000558400 ALDH7A1P49419 539 aaKnown RBP9.36□□□□□ -0.91
TPM1-213ENST00000558400 SLC12A3P55017 1021 aa9.36□□□□□ -0.91
TPM1-213ENST00000558400 CEBPZQ03701 1054 aaKnown RBP9.36□□□□□ -0.91
TPM1-213ENST00000558400 KRT17Q04695 432 aa9.36□□□□□ -0.91
TPM1-213ENST00000558400 DMP1Q13316 513 aaPredicted RBP9.36□□□□□ -0.91
TPM1-213ENST00000558400 BMS1Q14692 1282 aaKnown RBP9.36□□□□□ -0.91
TPM1-213ENST00000558400 STK38Q15208 465 aa9.36□□□□□ -0.91
TPM1-213ENST00000558400 TMEM119Q4V9L6 283 aa9.36□□□□□ -0.91
TPM1-213ENST00000558400 TIGD5Q53EQ6 642 aa9.36□□□□□ -0.91
TPM1-213ENST00000558400 CDCA2Q69YH5 1023 aaPredicted RBP9.36□□□□□ -0.91
TPM1-213ENST00000558400 PDE12Q6L8Q7 609 aaKnown RBP9.36□□□□□ -0.91
TPM1-213ENST00000558400 SLC27A1Q6PCB7 646 aa9.36□□□□□ -0.91
TPM1-213ENST00000558400 LRRC43Q8N309 656 aa9.36□□□□□ -0.91
TPM1-213ENST00000558400 KRI1Q8N9T8 703 aaKnown RBP9.36□□□□□ -0.91
TPM1-213ENST00000558400 RNF169Q8NCN4 708 aa9.36□□□□□ -0.91
TPM1-213ENST00000558400 PPP2R3CQ969Q6 453 aa9.36□□□□□ -0.91
TPM1-213ENST00000558400 PNMA5Q96PV4 448 aa9.36□□□□□ -0.91
TPM1-213ENST00000558400 USP28Q96RU2 1077 aa9.36□□□□□ -0.91
TPM1-213ENST00000558400 ADPGKQ9BRR6 497 aa9.36□□□□□ -0.91
TPM1-213ENST00000558400 TRIM6Q9C030 488 aaPredicted RBP9.36□□□□□ -0.91
TPM1-213ENST00000558400 EPHX3Q9H6B9 360 aa9.36□□□□□ -0.91
TPM1-213ENST00000558400 TMEM134Q9H6X4 195 aa9.36□□□□□ -0.91
TPM1-213ENST00000558400 LARSQ9P2J5 1176 aaKnown RBP9.36□□□□□ -0.91
TPM1-213ENST00000558400 ODF2LQ9ULJ1 636 aa9.36□□□□□ -0.91
TPM1-213ENST00000558400 COG5Q9UP83 839 aa9.36□□□□□ -0.91
TPM1-213ENST00000558400 PLAGL2Q9UPG8 496 aa9.36□□□□□ -0.91
TPM1-213ENST00000558400 CACNA1AO00555 2505 aa9.36□□□□□ -0.91
TPM1-213ENST00000558400 COL4A6Q14031 1691 aa9.36□□□□□ -0.91
TPM1-213ENST00000558400 CCDC169A6NNP5 214 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 N4BP3O15049 544 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 SPTLC2O15270 562 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 HIP1RO75146 1068 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 OFD1O75665 1012 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 YEATS4O95619 227 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 F13A1P00488 732 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 ALDH2P05091 517 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 LINC00271P0C7V0 271 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 BMP1P13497 986 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 ITGA4P13612 1032 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 ARF4P18085 180 aaPredicted RBP9.35□□□□□ -0.91
TPM1-213ENST00000558400 PPM1AP35813 382 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 NPTX2P47972 431 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 PEX3P56589 373 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 PLCB3Q01970 1234 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 PRPF4BQ13523 1007 aaKnown RBP9.35□□□□□ -0.91
TPM1-213ENST00000558400 SKIV2LQ15477 1246 aaKnown RBP9.35□□□□□ -0.91
TPM1-213ENST00000558400 CCDC85BQ15834 202 aaPredicted RBP9.35□□□□□ -0.91
TPM1-213ENST00000558400 TMEM132AQ24JP5 1023 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 AAK1Q2M2I8 961 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 NOMO2Q5JPE7 1267 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 RRAGBQ5VZM2 374 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 FAM173BQ6P4H8 233 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms