RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 SRFP11831 508 aa7.79□□□□□ -1.16
SPTLC2-206ENST00000557566 TGM1P22735 817 aa7.79□□□□□ -1.16
SPTLC2-206ENST00000557566 PMLP29590 882 aa7.79□□□□□ -1.16
SPTLC2-206ENST00000557566 CCND2P30279 289 aa7.79□□□□□ -1.16
SPTLC2-206ENST00000557566 DPYDQ12882 1025 aa7.79□□□□□ -1.16
SPTLC2-206ENST00000557566 PPFIA1Q13136 1202 aa7.79□□□□□ -1.16
SPTLC2-206ENST00000557566 GNPTABQ3T906 1256 aa7.79□□□□□ -1.16
SPTLC2-206ENST00000557566 FAM102BQ5T8I3 360 aa7.79□□□□□ -1.16
SPTLC2-206ENST00000557566 UTP14CQ5TAP6 766 aaKnown RBP7.79□□□□□ -1.16
SPTLC2-206ENST00000557566 TMC5Q6UXY8 1006 aa7.79□□□□□ -1.16
SPTLC2-206ENST00000557566 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.79□□□□□ -1.16
SPTLC2-206ENST00000557566 MTERF4Q7Z6M4 381 aaKnown RBP7.79□□□□□ -1.16
SPTLC2-206ENST00000557566 CABP7Q86V35 215 aa7.79□□□□□ -1.16
SPTLC2-206ENST00000557566 VSIG10LQ86VR7 867 aa7.79□□□□□ -1.16
SPTLC2-206ENST00000557566 MAML2Q8IZL2 1156 aaPredicted RBP7.79□□□□□ -1.16
SPTLC2-206ENST00000557566 LINC00528Q8N1L1 170 aa7.79□□□□□ -1.16
SPTLC2-206ENST00000557566 MEIOBQ8N635 442 aa7.79□□□□□ -1.16
SPTLC2-206ENST00000557566 PJA1Q8NG27 643 aa7.79□□□□□ -1.16
SPTLC2-206ENST00000557566 ZNF558Q96NG5 402 aa7.79□□□□□ -1.16
SPTLC2-206ENST00000557566 KLF16Q9BXK1 252 aaPredicted RBP7.79□□□□□ -1.16
SPTLC2-206ENST00000557566 CWH43Q9H720 699 aa7.79□□□□□ -1.16
SPTLC2-206ENST00000557566 ARHGEF3Q9NR81 526 aa7.79□□□□□ -1.16
SPTLC2-206ENST00000557566 C1orf112Q9NSG2 853 aa7.79□□□□□ -1.16
SPTLC2-206ENST00000557566 SPATA6Q9NWH7 488 aaPredicted RBP7.79□□□□□ -1.16
SPTLC2-206ENST00000557566 ZSCAN32Q9NX65 697 aa7.79□□□□□ -1.16
SPTLC2-206ENST00000557566 TRPV2Q9Y5S1 764 aa7.79□□□□□ -1.16
SPTLC2-206ENST00000557566 IGSF9BQ9UPX0 1349 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 DENND3A2RUS2 1198 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 MBLAC1A4D2B0 266 aaPredicted RBP7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 M0R2N6 131 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 ORC4O43929 436 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 RAB11FIP3O75154 756 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 OFD1O75665 1012 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 RLBP1P12271 317 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 MCM5P33992 734 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 HSD17B4P51659 736 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 SEC13P55735 322 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 NUCB1Q02818 461 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 PGM5Q15124 567 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 GRIK4Q16099 956 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 BMP2KLQ5H9B9 411 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 LCE2CQ5TA81 110 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 KANK3Q6NY19 840 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 KCNT2Q6UVM3 1135 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 STOX1Q6ZVD7 989 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 CYFIP1Q7L576 1253 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 GPR149Q86SP6 731 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 ZSCAN30Q86W11 494 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 ZBTB44Q8NCP5 570 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 GPR152Q8TDT2 470 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 GLG1Q92896 1179 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 NXPE3Q969Y0 559 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 SHDQ96IW2 340 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 BCO2Q9BYV7 579 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 PANK2Q9BZ23 570 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 UBA5Q9GZZ9 404 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 FAM49AQ9H0Q0 323 aaPredicted RBP7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 TMX1Q9H3N1 280 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 OSBPL3Q9H4L5 887 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 SFXN1Q9H9B4 322 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 PARD6AQ9NPB6 346 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 TOMM22Q9NS69 142 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 TCP11L1Q9NUJ3 509 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 MAP3K20Q9NYL2 800 aaKnown RBP7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 SPG21Q9NZD8 308 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 RAB23Q9ULC3 237 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 DOCK8Q8NF50 2099 aa7.78□□□□□ -1.16
SPTLC2-206ENST00000557566 SMG1Q96Q15 3661 aaKnown RBP7.77□□□□□ -1.17
SPTLC2-206ENST00000557566 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.77□□□□□ -1.17
SPTLC2-206ENST00000557566 LILRB5O75023 590 aa7.77□□□□□ -1.17
SPTLC2-206ENST00000557566 LRP3O75074 770 aa7.77□□□□□ -1.17
SPTLC2-206ENST00000557566 HMMRO75330 724 aa7.77□□□□□ -1.17
SPTLC2-206ENST00000557566 GOLGA8HP0CJ92 632 aa7.77□□□□□ -1.17
SPTLC2-206ENST00000557566 GLULP15104 373 aa7.77□□□□□ -1.17
SPTLC2-206ENST00000557566 EPCAMP16422 314 aa7.77□□□□□ -1.17
SPTLC2-206ENST00000557566 GBP2P32456 591 aaPredicted RBP7.77□□□□□ -1.17
SPTLC2-206ENST00000557566 ZNF445P59923 1031 aa7.77□□□□□ -1.17
SPTLC2-206ENST00000557566 GHRHRQ02643 423 aa7.77□□□□□ -1.17
SPTLC2-206ENST00000557566 CSTF1Q05048 431 aaKnown RBP7.77□□□□□ -1.17
SPTLC2-206ENST00000557566 SPEM2Q0P670 501 aa7.77□□□□□ -1.17
SPTLC2-206ENST00000557566 TMEM62Q0P6H9 643 aa7.77□□□□□ -1.17
SPTLC2-206ENST00000557566 GIT2Q14161 759 aa7.77□□□□□ -1.17
SPTLC2-206ENST00000557566 PTPN14Q15678 1187 aa7.77□□□□□ -1.17
SPTLC2-206ENST00000557566 QRICH1Q2TAL8 776 aa7.77□□□□□ -1.17
SPTLC2-206ENST00000557566 KLHL40Q2TBA0 621 aa7.77□□□□□ -1.17
SPTLC2-206ENST00000557566 LETM2Q2VYF4 491 aa7.77□□□□□ -1.17
SPTLC2-206ENST00000557566 DCLRE1AQ6PJP8 1040 aa7.77□□□□□ -1.17
SPTLC2-206ENST00000557566 SLC24A5Q71RS6 500 aa7.77□□□□□ -1.17
SPTLC2-206ENST00000557566 TRIM46Q7Z4K8 759 aa7.77□□□□□ -1.17
SPTLC2-206ENST00000557566 LRRC43Q8N309 656 aa7.77□□□□□ -1.17
SPTLC2-206ENST00000557566 SLC44A3Q8N4M1 653 aa7.77□□□□□ -1.17
SPTLC2-206ENST00000557566 IL31RAQ8NI17 732 aa7.77□□□□□ -1.17
SPTLC2-206ENST00000557566 RSAD2Q8WXG1 361 aa7.77□□□□□ -1.17
SPTLC2-206ENST00000557566 ANP32BQ92688 251 aaKnown RBP7.77□□□□□ -1.17
SPTLC2-206ENST00000557566 STAMQ92783 540 aa7.77□□□□□ -1.17
SPTLC2-206ENST00000557566 TNPO1Q92973 898 aaKnown RBP7.77□□□□□ -1.17
SPTLC2-206ENST00000557566 ADAM2Q99965 735 aa7.77□□□□□ -1.17
SPTLC2-206ENST00000557566 FOXQ1Q9C009 403 aa7.77□□□□□ -1.17
SPTLC2-206ENST00000557566 TMEM117Q9H0C3 514 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms