RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 TNPO1Q92973 898 aaKnown RBP10.36□□□□□ -0.75
PRKCH-218ENST00000555628 RRP36Q96EU6 259 aaKnown RBP10.36□□□□□ -0.75
PRKCH-218ENST00000555628 RHOBTB2Q9BYZ6 727 aa10.36□□□□□ -0.75
PRKCH-218ENST00000555628 LNPKQ9C0E8 428 aa10.36□□□□□ -0.75
PRKCH-218ENST00000555628 PSTPIP2Q9H939 334 aa10.36□□□□□ -0.75
PRKCH-218ENST00000555628 SFXN1Q9H9B4 322 aa10.36□□□□□ -0.75
PRKCH-218ENST00000555628 LY9Q9HBG7 655 aa10.36□□□□□ -0.75
PRKCH-218ENST00000555628 WNT16Q9UBV4 365 aa10.36□□□□□ -0.75
PRKCH-218ENST00000555628 PCDHA6Q9UN73 950 aa10.36□□□□□ -0.75
PRKCH-218ENST00000555628 PCDHA8Q9Y5H6 950 aa10.36□□□□□ -0.75
PRKCH-218ENST00000555628 MYH9P35579 1960 aaKnown RBP10.35□□□□□ -0.75
PRKCH-218ENST00000555628 FAM208BQ5VWN6 2430 aa10.35□□□□□ -0.75
PRKCH-218ENST00000555628 WDFY3Q8IZQ1 3526 aa10.35□□□□□ -0.75
PRKCH-218ENST00000555628 A0A0U1RQF3 1178 aa10.35□□□□□ -0.75
PRKCH-218ENST00000555628 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.35□□□□□ -0.75
PRKCH-218ENST00000555628 NT5C1B-RDH14C9J2C7 533 aa10.35□□□□□ -0.75
PRKCH-218ENST00000555628 MEIS1O00470 390 aa10.35□□□□□ -0.75
PRKCH-218ENST00000555628 DDAH1O94760 285 aa10.35□□□□□ -0.75
PRKCH-218ENST00000555628 CLCN4P51793 760 aa10.35□□□□□ -0.75
PRKCH-218ENST00000555628 ZNF484Q5JVG2 852 aa10.35□□□□□ -0.75
PRKCH-218ENST00000555628 C15orf39Q6ZRI6 1047 aa10.35□□□□□ -0.75
PRKCH-218ENST00000555628 CCDC149Q6ZUS6 474 aa10.35□□□□□ -0.75
PRKCH-218ENST00000555628 OTOP3Q7RTS5 596 aa10.35□□□□□ -0.75
PRKCH-218ENST00000555628 SMC5Q8IY18 1101 aa10.35□□□□□ -0.75
PRKCH-218ENST00000555628 ZNF654Q8IZM8 581 aa10.35□□□□□ -0.75
PRKCH-218ENST00000555628 VPS52Q8N1B4 723 aa10.35□□□□□ -0.75
PRKCH-218ENST00000555628 CRYGNQ8WXF5 182 aa10.35□□□□□ -0.75
PRKCH-218ENST00000555628 RSAD2Q8WXG1 361 aa10.35□□□□□ -0.75
PRKCH-218ENST00000555628 RIN2Q8WYP3 895 aaPredicted RBP10.35□□□□□ -0.75
PRKCH-218ENST00000555628 PPP1R16BQ96T49 567 aa10.35□□□□□ -0.75
PRKCH-218ENST00000555628 MYL10Q9BUA6 226 aa10.35□□□□□ -0.75
PRKCH-218ENST00000555628 TRAIPQ9BWF2 469 aa10.35□□□□□ -0.75
PRKCH-218ENST00000555628 DIAPH3Q9NSV4 1193 aa10.35□□□□□ -0.75
PRKCH-218ENST00000555628 IGSF9Q9P2J2 1179 aa10.35□□□□□ -0.75
PRKCH-218ENST00000555628 EPS15L1Q9UBC2 864 aa10.35□□□□□ -0.75
PRKCH-218ENST00000555628 ZFYVE26Q68DK2 2539 aa10.35□□□□□ -0.75
PRKCH-218ENST00000555628 CXCL14O95715 111 aa10.34□□□□□ -0.75
PRKCH-218ENST00000555628 TGM1P22735 817 aa10.34□□□□□ -0.75
PRKCH-218ENST00000555628 METAP2P50579 478 aaKnown RBP eCLIP10.34□□□□□ -0.75
PRKCH-218ENST00000555628 RSPO4Q2I0M5 234 aaPredicted RBP10.34□□□□□ -0.75
PRKCH-218ENST00000555628 LETM2Q2VYF4 491 aa10.34□□□□□ -0.75
PRKCH-218ENST00000555628 CEP55Q53EZ4 464 aa10.34□□□□□ -0.75
PRKCH-218ENST00000555628 PHLDB3Q6NSJ2 640 aa10.34□□□□□ -0.75
PRKCH-218ENST00000555628 DDX53Q86TM3 631 aaKnown RBP10.34□□□□□ -0.75
PRKCH-218ENST00000555628 ZNF511Q8NB15 262 aa10.34□□□□□ -0.75
PRKCH-218ENST00000555628 CMASQ8NFW8 434 aaPredicted RBP10.34□□□□□ -0.75
PRKCH-218ENST00000555628 HELQQ8TDG4 1101 aa10.34□□□□□ -0.75
PRKCH-218ENST00000555628 ACSF2Q96CM8 615 aaPredicted RBP10.34□□□□□ -0.75
PRKCH-218ENST00000555628 IGSF21Q96ID5 467 aa10.34□□□□□ -0.75
PRKCH-218ENST00000555628 TBC1D17Q9HA65 648 aa10.34□□□□□ -0.75
PRKCH-218ENST00000555628 MAFBQ9Y5Q3 323 aaPredicted RBP10.34□□□□□ -0.75
PRKCH-218ENST00000555628 MIA3Q5JRA6 1907 aa10.34□□□□□ -0.75
PRKCH-218ENST00000555628 IGLV3-22A0A075B6J6 115 aa10.33□□□□□ -0.76
PRKCH-218ENST00000555628 E7EWF7 191 aa10.33□□□□□ -0.76
PRKCH-218ENST00000555628 HIP1O00291 1037 aa10.33□□□□□ -0.76
PRKCH-218ENST00000555628 ST8SIA5O15466 376 aa10.33□□□□□ -0.76
PRKCH-218ENST00000555628 EFEMP2O95967 443 aa10.33□□□□□ -0.76
PRKCH-218ENST00000555628 GALTP07902 379 aa10.33□□□□□ -0.76
PRKCH-218ENST00000555628 DARSP14868 501 aaKnown RBP10.33□□□□□ -0.76
PRKCH-218ENST00000555628 EIF4BP23588 611 aaKnown RBP10.33□□□□□ -0.76
PRKCH-218ENST00000555628 SREBF1P36956 1147 aa10.33□□□□□ -0.76
PRKCH-218ENST00000555628 CLCN3P51790 818 aa10.33□□□□□ -0.76
PRKCH-218ENST00000555628 PTH1RQ03431 593 aa10.33□□□□□ -0.76
PRKCH-218ENST00000555628 TBC1D8BQ0IIM8 1120 aa10.33□□□□□ -0.76
PRKCH-218ENST00000555628 GIT2Q14161 759 aa10.33□□□□□ -0.76
PRKCH-218ENST00000555628 NIPA1Q7RTP0 329 aa10.33□□□□□ -0.76
PRKCH-218ENST00000555628 CATIPQ7Z7H3 387 aa10.33□□□□□ -0.76
PRKCH-218ENST00000555628 CABP7Q86V35 215 aa10.33□□□□□ -0.76
PRKCH-218ENST00000555628 CMTR1Q8N1G2 835 aaKnown RBP10.33□□□□□ -0.76
PRKCH-218ENST00000555628 SLC44A3Q8N4M1 653 aa10.33□□□□□ -0.76
PRKCH-218ENST00000555628 EHBP1Q8NDI1 1231 aa10.33□□□□□ -0.76
PRKCH-218ENST00000555628 KCNG4Q8TDN1 519 aa10.33□□□□□ -0.76
PRKCH-218ENST00000555628 NELL1Q92832 810 aa10.33□□□□□ -0.76
PRKCH-218ENST00000555628 FOXJ1Q92949 421 aa10.33□□□□□ -0.76
PRKCH-218ENST00000555628 LZTS2Q9BRK4 669 aa10.33□□□□□ -0.76
PRKCH-218ENST00000555628 SDF4Q9BRK5 362 aa10.33□□□□□ -0.76
PRKCH-218ENST00000555628 MRPL9Q9BYD2 267 aaKnown RBP10.33□□□□□ -0.76
PRKCH-218ENST00000555628 FBXL21Q9UKT6 434 aa10.33□□□□□ -0.76
PRKCH-218ENST00000555628 hCG_1642624A0A1W2PR95 340 aa10.32□□□□□ -0.76
PRKCH-218ENST00000555628 SPDYE3A6NKU9 549 aa10.32□□□□□ -0.76
PRKCH-218ENST00000555628 MEIS3P2A8K0S8 358 aa10.32□□□□□ -0.76
PRKCH-218ENST00000555628 ANHXE9PGG2 379 aa10.32□□□□□ -0.76
PRKCH-218ENST00000555628 FAM86B1E9PN63 330 aa10.32□□□□□ -0.76
PRKCH-218ENST00000555628 AP1G2O75843 785 aa10.32□□□□□ -0.76
PRKCH-218ENST00000555628 DCNP07585 359 aaKnown RBP10.32□□□□□ -0.76
PRKCH-218ENST00000555628 CNPP09543 421 aaKnown RBP10.32□□□□□ -0.76
PRKCH-218ENST00000555628 FAM86B2P0C5J1 330 aa10.32□□□□□ -0.76
PRKCH-218ENST00000555628 SRFP11831 508 aa10.32□□□□□ -0.76
PRKCH-218ENST00000555628 GPC3P51654 580 aa10.32□□□□□ -0.76
PRKCH-218ENST00000555628 ATXN1P54253 815 aaKnown RBP10.32□□□□□ -0.76
PRKCH-218ENST00000555628 NLRP11P59045 1033 aaKnown RBP10.32□□□□□ -0.76
PRKCH-218ENST00000555628 PDXDC2PQ6P474 469 aa10.32□□□□□ -0.76
PRKCH-218ENST00000555628 C1orf210Q8IVY1 113 aa10.32□□□□□ -0.76
PRKCH-218ENST00000555628 TEX2Q8IWB9 1127 aa10.32□□□□□ -0.76
PRKCH-218ENST00000555628 RNF168Q8IYW5 571 aaPredicted RBP10.32□□□□□ -0.76
PRKCH-218ENST00000555628 ABI1Q8IZP0 508 aa10.32□□□□□ -0.76
PRKCH-218ENST00000555628 PJA1Q8NG27 643 aa10.32□□□□□ -0.76
PRKCH-218ENST00000555628 RSPH1Q8WYR4 309 aa10.32□□□□□ -0.76
PRKCH-218ENST00000555628 ZNF707Q96C28 371 aaPredicted RBP10.32□□□□□ -0.76
PRKCH-218ENST00000555628 TMEM169Q96HH4 297 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms