RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	OR10A5	Q9H207	317 aa		7.04	□□□□□ -1.28
PSMC6-208	ENST00000554956	THG1L	Q9NWX6	298 aa	Known RBP	7.04	□□□□□ -1.28
PSMC6-208	ENST00000554956	POLD1	P28340	1107 aa		7.03	□□□□□ -1.28
PSMC6-208	ENST00000554956	FNTB	P49356	437 aa		7.03	□□□□□ -1.28
PSMC6-208	ENST00000554956	TOP3A	Q13472	1001 aa	Predicted RBP	7.03	□□□□□ -1.28
PSMC6-208	ENST00000554956	PPM1K	Q8N3J5	372 aa		7.03	□□□□□ -1.28
PSMC6-208	ENST00000554956	CXorf38	Q8TB03	319 aa		7.03	□□□□□ -1.28
PSMC6-208	ENST00000554956	KATNBL1	Q9H079	304 aa		7.03	□□□□□ -1.28
PSMC6-208	ENST00000554956	ACSS2	Q9NR19	701 aa		7.03	□□□□□ -1.28
PSMC6-208	ENST00000554956	CDC42EP3	Q9UKI2	254 aa		7.03	□□□□□ -1.28
PSMC6-208	ENST00000554956	ZKSCAN5	Q9Y2L8	839 aa		7.03	□□□□□ -1.28
PSMC6-208	ENST00000554956	COL5A2	P05997	1499 aa	Predicted RBP	7.03	□□□□□ -1.28
PSMC6-208	ENST00000554956	NRK	Q7Z2Y5	1582 aa		7.03	□□□□□ -1.28
PSMC6-208	ENST00000554956	USP6	P35125	1406 aa		7.02	□□□□□ -1.29
PSMC6-208	ENST00000554956	B4GALT4	O60513	344 aa		7.02	□□□□□ -1.29
PSMC6-208	ENST00000554956	PDE8A	O60658	829 aa		7.02	□□□□□ -1.29
PSMC6-208	ENST00000554956	GAS7	O60861	476 aa		7.02	□□□□□ -1.29
PSMC6-208	ENST00000554956	RGS3	P49796	1198 aa		7.02	□□□□□ -1.29
PSMC6-208	ENST00000554956	KCNQ1	P51787	676 aa		7.02	□□□□□ -1.29
PSMC6-208	ENST00000554956	RRAD	P55042	308 aa		7.02	□□□□□ -1.29
PSMC6-208	ENST00000554956	SLC6A3	Q01959	620 aa		7.02	□□□□□ -1.29
PSMC6-208	ENST00000554956	ALDH6A1	Q02252	535 aa	Known RBP	7.02	□□□□□ -1.29
PSMC6-208	ENST00000554956	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	7.02	□□□□□ -1.29
PSMC6-208	ENST00000554956	RALYL	Q86SE5	291 aa	Known RBP	7.02	□□□□□ -1.29
PSMC6-208	ENST00000554956	C16orf92	Q96LL3	132 aa		7.02	□□□□□ -1.29
PSMC6-208	ENST00000554956	TOMM22	Q9NS69	142 aa		7.02	□□□□□ -1.29
PSMC6-208	ENST00000554956	TOPAZ1	Q8N9V7	1692 aa		7.02	□□□□□ -1.29
PSMC6-208	ENST00000554956	LMO7	Q8WWI1	1683 aa		7.02	□□□□□ -1.29
PSMC6-208	ENST00000554956	TTC21B	Q7Z4L5	1316 aa		7.01	□□□□□ -1.29
PSMC6-208	ENST00000554956	LRP5	O75197	1615 aa		7.01	□□□□□ -1.29
PSMC6-208	ENST00000554956	PHRF1	Q9P1Y6	1649 aa	Known RBP	7.01	□□□□□ -1.29
PSMC6-208	ENST00000554956	AATK	Q6ZMQ8	1374 aa		7.01	□□□□□ -1.29
PSMC6-208	ENST00000554956	PRL	P01236	227 aa		7.01	□□□□□ -1.29
PSMC6-208	ENST00000554956	SYN1	P17600	705 aa		7.01	□□□□□ -1.29
PSMC6-208	ENST00000554956	HSD3B2	P26439	372 aa		7.01	□□□□□ -1.29
PSMC6-208	ENST00000554956	MOGS	Q13724	837 aa		7.01	□□□□□ -1.29
PSMC6-208	ENST00000554956	LARP4	Q71RC2	724 aa	Known RBP eCLIP	7.01	□□□□□ -1.29
PSMC6-208	ENST00000554956	OTOP2	Q7RTS6	562 aa		7.01	□□□□□ -1.29
PSMC6-208	ENST00000554956	ARHGEF25	Q86VW2	580 aa		7.01	□□□□□ -1.29
PSMC6-208	ENST00000554956	KIF18B	Q86Y91	864 aa		7.01	□□□□□ -1.29
PSMC6-208	ENST00000554956	REXO1L1P	Q8IX06	675 aa		7.01	□□□□□ -1.29
PSMC6-208	ENST00000554956	SMC1B	Q8NDV3	1235 aa		7.01	□□□□□ -1.29
PSMC6-208	ENST00000554956	WDR48	Q8TAF3	677 aa		7.01	□□□□□ -1.29
PSMC6-208	ENST00000554956	LEO1	Q8WVC0	666 aa	Predicted RBP	7.01	□□□□□ -1.29
PSMC6-208	ENST00000554956	GPR101	Q96P66	508 aa	Predicted RBP	7.01	□□□□□ -1.29
PSMC6-208	ENST00000554956	FOXB1	Q99853	325 aa		7.01	□□□□□ -1.29
PSMC6-208	ENST00000554956	PTPN18	Q99952	460 aa		7.01	□□□□□ -1.29
PSMC6-208	ENST00000554956	ZDHHC5	Q9C0B5	715 aa		7.01	□□□□□ -1.29
PSMC6-208	ENST00000554956	KIAA1683	Q9H0B3	1180 aa		7.01	□□□□□ -1.29
PSMC6-208	ENST00000554956	IFT57	Q9NWB7	429 aa		7.01	□□□□□ -1.29
PSMC6-208	ENST00000554956	THRAP3	Q9Y2W1	955 aa	Known RBP	7.01	□□□□□ -1.29
PSMC6-208	ENST00000554956	SPO11	Q9Y5K1	396 aa		7.01	□□□□□ -1.29
PSMC6-208	ENST00000554956	TNS1	Q9HBL0	1735 aa	Known RBP	7.01	□□□□□ -1.29
PSMC6-208	ENST00000554956	ZNF536	O15090	1300 aa		7.01	□□□□□ -1.29
PSMC6-208	ENST00000554956	LAMTOR5	O43504	91 aa		7	□□□□□ -1.29
PSMC6-208	ENST00000554956	ETV4	P43268	484 aa		7	□□□□□ -1.29
PSMC6-208	ENST00000554956	USP10	Q14694	798 aa	Known RBP	7	□□□□□ -1.29
PSMC6-208	ENST00000554956	TOM1L2	Q6ZVM7	507 aa		7	□□□□□ -1.29
PSMC6-208	ENST00000554956	CXXC5	Q7LFL8	322 aa	Known RBP	7	□□□□□ -1.29
PSMC6-208	ENST00000554956	CALML6	Q8TD86	181 aa		7	□□□□□ -1.29
PSMC6-208	ENST00000554956	ZMAT4	Q9H898	229 aa		7	□□□□□ -1.29
PSMC6-208	ENST00000554956	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	7	□□□□□ -1.29
PSMC6-208	ENST00000554956	CRB1	P82279	1406 aa		7	□□□□□ -1.29
PSMC6-208	ENST00000554956	PARD3	Q8TEW0	1356 aa		6.99	□□□□□ -1.29
PSMC6-208	ENST00000554956	UBA6	A0AVT1	1052 aa	Predicted RBP	6.99	□□□□□ -1.29
PSMC6-208	ENST00000554956	TGM5	O43548	720 aa		6.99	□□□□□ -1.29
PSMC6-208	ENST00000554956	CUTA	O60888	179 aa		6.99	□□□□□ -1.29
PSMC6-208	ENST00000554956	CNOT4	O95628	575 aa	Known RBP	6.99	□□□□□ -1.29
PSMC6-208	ENST00000554956	PLAT	P00750	562 aa		6.99	□□□□□ -1.29
PSMC6-208	ENST00000554956	HMGCR	P04035	888 aa		6.99	□□□□□ -1.29
PSMC6-208	ENST00000554956	CYP17A1	P05093	508 aa		6.99	□□□□□ -1.29
PSMC6-208	ENST00000554956	APEX1	P27695	318 aa	Known RBP	6.99	□□□□□ -1.29
PSMC6-208	ENST00000554956	STAT5B	P51692	787 aa		6.99	□□□□□ -1.29
PSMC6-208	ENST00000554956	PLP2	Q04941	152 aa		6.99	□□□□□ -1.29
PSMC6-208	ENST00000554956	EPHA7	Q15375	998 aa		6.99	□□□□□ -1.29
PSMC6-208	ENST00000554956	LCE1D	Q5T752	114 aa		6.99	□□□□□ -1.29
PSMC6-208	ENST00000554956	TMEM200B	Q69YZ2	307 aa		6.99	□□□□□ -1.29
PSMC6-208	ENST00000554956	SLFN12L	Q6IEE8	588 aa		6.99	□□□□□ -1.29
PSMC6-208	ENST00000554956	LIMS2	Q7Z4I7	341 aa		6.99	□□□□□ -1.29
PSMC6-208	ENST00000554956	PLEKHH3	Q7Z736	793 aa		6.99	□□□□□ -1.29
PSMC6-208	ENST00000554956	THNSL2	Q86YJ6	484 aa		6.99	□□□□□ -1.29
PSMC6-208	ENST00000554956	AHI1	Q8N157	1196 aa		6.99	□□□□□ -1.29
PSMC6-208	ENST00000554956	UBR7	Q8N806	425 aa		6.99	□□□□□ -1.29
PSMC6-208	ENST00000554956	RTF1	Q92541	710 aa	Known RBP	6.99	□□□□□ -1.29
PSMC6-208	ENST00000554956	CARD11	Q9BXL7	1154 aa		6.99	□□□□□ -1.29
PSMC6-208	ENST00000554956	MS4A5	Q9H3V2	200 aa		6.99	□□□□□ -1.29
PSMC6-208	ENST00000554956	SPTLC3	Q9NUV7	552 aa		6.99	□□□□□ -1.29
PSMC6-208	ENST00000554956	PPP4R1L	Q9P1A2	415 aa		6.99	□□□□□ -1.29
PSMC6-208	ENST00000554956	MAGEL2	Q9UJ55	1249 aa		6.99	□□□□□ -1.29
PSMC6-208	ENST00000554956	SLIT3	O75094	1523 aa		6.99	□□□□□ -1.29
PSMC6-208	ENST00000554956	CPSF1	Q10570	1443 aa	Known RBP	6.99	□□□□□ -1.29
PSMC6-208	ENST00000554956	EVC2	Q86UK5	1308 aa		6.99	□□□□□ -1.29
PSMC6-208	ENST00000554956	WDR17	Q8IZU2	1322 aa		6.99	□□□□□ -1.29
PSMC6-208	ENST00000554956	BRD4	O60885	1362 aa	Predicted RBP	6.98	□□□□□ -1.29
PSMC6-208	ENST00000554956		A0A0G2JNJ9	132 aa		6.98	□□□□□ -1.29
PSMC6-208	ENST00000554956	LCHN	A4D1U4	455 aa		6.98	□□□□□ -1.29
PSMC6-208	ENST00000554956	PLSCR1	O15162	318 aa		6.98	□□□□□ -1.29
PSMC6-208	ENST00000554956	CELA3B	P08861	270 aa		6.98	□□□□□ -1.29
PSMC6-208	ENST00000554956	ADCYAP1R1	P41586	468 aa		6.98	□□□□□ -1.29
PSMC6-208	ENST00000554956	SCNN1B	P51168	640 aa		6.98	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms